Factsheet for HORVU5Hr1G043200.4

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 6
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G133600.1	Wheat	extracellular, vacuole	95.19	95.19
TraesCS5D01G139700.1	Wheat	vacuole	94.65	94.91
TraesCS5A01G131200.1	Wheat	vacuole	63.37	93.68
EES07950	Sorghum	vacuole	66.31	63.27
KXG27696	Sorghum	vacuole	65.78	63.08
Os12t0138800-01	Rice	golgi, mitochondrion, plasma membrane, vacuole	68.45	59.53
Os11t0142400-01	Rice	extracellular	13.1	53.85
Zm00001d052471_P001	Maize	vacuole	64.17	49.38
VIT_08s0007g05360.t01	Wine grape	vacuole	44.38	43.92
Bra000222.1-P	Field mustard	cytosol	37.97	41.16
CDX79944	Canola	vacuole	41.18	41.07
CDY23858	Canola	vacuole	40.91	40.91
Bra004613.1-P	Field mustard	vacuole	40.91	40.8
CDY22515	Canola	vacuole	37.43	40.11
KRH66810	Soybean	vacuole	40.37	39.53
AT2G41290.1	Thale cress	vacuole	39.57	39.36
CDY35420	Canola	vacuole	36.63	39.14
HORVU2Hr1G064060.1	Barley	mitochondrion, vacuole	25.94	38.19
HORVU6Hr1G026020.1	Barley	cytosol	25.13	37.9
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	34.22	36.99
HORVU5Hr1G114720.1	Barley	plastid	18.72	36.84
PGSC0003DMT400048627	Potato	cytosol, golgi, mitochondrion, vacuole	33.42	36.66
HORVU2Hr1G013460.2	Barley	golgi, mitochondrion, vacuole	28.34	36.43
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	33.69	35.39
HORVU5Hr1G093840.1	Barley	vacuole	31.82	35.1
HORVU7Hr1G028580.1	Barley	golgi, vacuole	32.89	34.94
HORVU5Hr1G058940.2	Barley	vacuole	34.22	34.88
HORVU5Hr1G095260.1	Barley	extracellular	37.17	34.84
HORVU3Hr1G065520.3	Barley	extracellular	29.95	34.78
HORVU3Hr1G109810.1	Barley	golgi, vacuole	32.35	34.67
HORVU2Hr1G012970.2	Barley	mitochondrion	32.35	34.57
HORVU5Hr1G009400.2	Barley	cytosol, mitochondrion, plastid, vacuole	12.3	33.82
HORVU7Hr1G028550.2	Barley	plastid	16.04	33.71
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	33.69	33.69
HORVU5Hr1G078340.1	Barley	golgi, vacuole	21.66	33.2
HORVU5Hr1G114800.1	Barley	extracellular	18.72	32.56
HORVU4Hr1G061230.2	Barley	peroxisome, vacuole	35.56	31.07
HORVU7Hr1G019170.1	Barley	cytosol	12.57	27.33
HORVU4Hr1G016850.1	Barley	cytosol	12.57	27.01
HORVU1Hr1G052450.8	Barley	extracellular, golgi, vacuole	22.46	22.83
HORVU6Hr1G025030.1	Barley	cytosol	6.42	21.62

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	EMBL:AK373675	UniProt:F2EC00	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	EnsemblPlantsGene:HORVU5Hr1G043200
EnsemblPlants:HORVU5Hr1G043200.4	InterPro:IPR011042	PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF22	SUPFAM:SSF63829
SignalP:SignalP-noTM	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TMHMM:TMhelix	UniParc:UPI00020083CE	SEG:seg

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2EC00]

Coordinates

chrchr5H:+:331643767..331649301

Molecular Weight (calculated)

40919.2 Da

IEP (calculated)

6.059

GRAVY (calculated)

-0.027

Length

374 amino acids

Sequence
(BLAST)

001: MMTISCRLVA VAVALALAAA ILSSSPLHAD VRAVVEISDV ELIPVDGGAA GPESVAFGVG GEGPYAGVSD GRVIRWLPEE GRWVEHSSAA APELLDSCRG
101: SQDVMKEHEC GRPLGLKFNN KTGDLYVADS YFGLRVVSPG DKVSRLVGPE QPGNPFSFAN GVEIDQETGV VYFTETSTRF QRRQFLNIVI SGDDTGRLLK
201: YDPNSNEVQV LVDGLAFPNG LLMSEDGSHL LLAETTTCKI HRYWLKTPKA STLEELVQLA GFPDNIKASP RGGFWVGLHG KRGKIAEWST SFPWLRRLVM
301: KLPPQRVQRV MAFLSRFGSQ VIALRVSEEG KVLEELIVHD IARKMFGSIS ELEERDGCLW IGSVHLPFLG HYCL

Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)

001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL

Arabidopsis Description

SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.