Factsheet for HORVU4Hr1G016850.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G019170.1	Barley	cytosol	85.06	86.05
HORVU6Hr1G025030.1	Barley	cytosol	51.72	81.08
HORVU5Hr1G114800.1	Barley	extracellular	75.86	61.4
HORVU5Hr1G095260.1	Barley	extracellular	76.44	33.33
PGSC0003DMT400063282	Potato	extracellular, vacuole	24.14	27.1
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	22.41	21.55
VIT_10s0042g00030.t01	Wine grape	vacuole	28.16	17.95
HORVU2Hr1G013460.2	Barley	golgi, mitochondrion, vacuole	29.89	17.87
VIT_13s0074g00070.t01	Wine grape	vacuole	27.59	17.52
HORVU5Hr1G078340.1	Barley	golgi, vacuole	24.14	17.21
VIT_00s0575g00010.t01	Wine grape	vacuole	28.74	16.03
VIT_10s0071g00020.t01	Wine grape	vacuole	28.16	15.86
VIT_10s0042g00010.t01	Wine grape	vacuole	27.59	15.24
VIT_10s0042g00050.t01	Wine grape	vacuole	27.59	14.91
VIT_10s0042g00020.t01	Wine grape	vacuole	27.59	14.91
HORVU2Hr1G012970.2	Barley	mitochondrion	29.89	14.86
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	26.44	14.84
OQU85880	Sorghum	golgi, vacuole	29.31	14.74
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	29.31	14.74
Solyc03g114550.1.1	Tomato	vacuole	22.99	14.6
VIT_13s0074g00080.t01	Wine grape	vacuole	27.01	14.6
VIT_00s0575g00020.t01	Wine grape	vacuole	27.01	14.6
EER90208	Sorghum	vacuole	28.74	14.45
EES07680	Sorghum	golgi, vacuole	28.74	14.45
VIT_10s0071g00250.t01	Wine grape	vacuole	28.16	14.41
VIT_10s0071g00010.t01	Wine grape	vacuole	26.44	14.29
EES05427	Sorghum	vacuole	28.16	14.24
EES05895	Sorghum	golgi, vacuole	28.16	14.16
PGSC0003DMT400056839	Potato	vacuole	25.29	14.1
Os07t0543600-00	Rice	golgi, vacuole	28.16	14.0
HORVU7Hr1G028580.1	Barley	golgi, vacuole	28.16	13.92
HORVU5Hr1G058940.2	Barley	vacuole	29.31	13.9
HORVU4Hr1G061230.2	Barley	peroxisome, vacuole	33.91	13.79
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	28.16	13.76
HORVU3Hr1G065520.3	Barley	extracellular	24.71	13.35
HORVU5Hr1G093840.1	Barley	vacuole	25.86	13.27
Solyc12g039070.1.1	Tomato	nucleus	25.29	13.21
HORVU3Hr1G109810.1	Barley	golgi, vacuole	26.44	13.18
KRH07462	Soybean	vacuole	25.86	12.97
KRH45407	Soybean	nucleus	25.86	12.89
Solyc03g114560.2.1	Tomato	extracellular	24.14	12.84
KRH03206	Soybean	vacuole	24.71	12.8
PGSC0003DMT400063286	Potato	vacuole	24.14	12.57
KRH56734	Soybean	vacuole	24.71	12.57
HORVU5Hr1G043200.4	Barley	vacuole	27.01	12.57
VIT_17s0000g04600.t01	Wine grape	vacuole	24.71	12.54
GSMUA_Achr5P05340_001	Banana	vacuole	25.86	12.53
Solyc03g114540.1.1	Tomato	vacuole	24.14	12.5
PGSC0003DMT400063274	Potato	vacuole	24.14	12.5
HORVU7Hr1G028550.2	Barley	plastid	12.64	12.36
Solyc03g114530.2.1	Tomato	vacuole	23.56	12.35
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	26.44	12.3
CDX73037	Canola	vacuole	22.99	12.2
PGSC0003DMT400063277	Potato	vacuole	22.99	12.05
CDY66189	Canola	vacuole	19.54	11.45
CDX96505	Canola	vacuole	21.26	11.28
KRH54773	Soybean	vacuole	21.84	11.28
VIT_17s0000g04610.t01	Wine grape	vacuole	23.56	11.17
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	17.24	10.83
Bra008126.1-P	Field mustard	vacuole	20.11	10.7
CDY47728	Canola	vacuole	20.11	10.7
CDX68204	Canola	vacuole	20.11	10.67
Bra003820.1-P	Field mustard	vacuole	19.54	10.53
AT1G74010.1	Thale cress	vacuole	19.54	10.46
CDX73039	Canola	vacuole	19.54	10.43
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	27.01	10.38
CDY66188	Canola	vacuole	19.54	10.37
Bra008127.1-P	Field mustard	vacuole	19.54	10.37
AT1G74000.1	Thale cress	vacuole	19.54	10.33
CDY45861	Canola	vacuole	19.54	10.3
CDX96506	Canola	vacuole	18.97	10.15
CDX73038	Canola	vacuole	18.97	10.15
AT1G74020.1	Thale cress	vacuole	19.54	10.15
CDX96507	Canola	vacuole	18.97	10.12
Bra015943.1-P	Field mustard	vacuole	18.97	10.12
CDY45863	Canola	vacuole	17.82	9.54
CDY47729	Canola	vacuole	17.82	9.54
Bra008124.1-P	Field mustard	vacuole	17.82	9.54
HORVU6Hr1G026020.1	Barley	cytosol	12.07	8.47
HORVU1Hr1G052450.8	Barley	extracellular, golgi, vacuole	16.67	7.88
HORVU2Hr1G064060.1	Barley	mitochondrion, vacuole	10.92	7.48
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	8.62	6.38
Bra015944.1-P	Field mustard	vacuole	18.97	5.53
TraesCS5B01G330900.1	Wheat	extracellular, vacuole	0.57	0.54
HORVU5Hr1G114720.1	Barley	plastid	0.57	0.53
KRH63133	Soybean	peroxisome, vacuole	0.0	0.0
HORVU5Hr1G009400.2	Barley	cytosol, mitochondrion, plastid, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU4Hr1G016850.1	EnsemblPlantsGene:HORVU4Hr1G016850	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synthase
PANTHER:PTHR10426	PANTHER:PTHR10426:SF24	SUPFAM:SSF63829	UniParc:UPI000B483B8E	UniProt:A0A287NDP8	MapMan:50.4.3

Description

No Description!

Coordinates

chrchr4H:-:70939017..70939825

Molecular Weight (calculated)

19014.6 Da

IEP (calculated)

6.668

GRAVY (calculated)

-0.310

Length

174 amino acids

Sequence
(BLAST)

001: RSLLSPLTHP PNAPPPSDRI CAKDLLRLGS MVDFPGFEAH PVDLPDAAEM PLHADAGERL RGAEIRFRGE VRGPESVAFD PRGRGPYTGV ADGRVLVWDG
101: ARSAYLAHAS PAWTVDLCGG PKAFPMEYLR DEHVCDRALG IRFDKRTRDL YIVDAYFGLS KVRPEGSMAS AVNC

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.