Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 3
- vacuole 4
- plasma membrane 3
- golgi 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G559000.1 | Wheat | cytosol | 75.14 | 74.33 |
| TraesCS3B01G558800.1 | Wheat | cytosol | 74.59 | 66.03 |
| TraesCS3B01G559100.1 | Wheat | vacuole | 77.84 | 41.74 |
| EES05895 | Sorghum | golgi, vacuole | 67.57 | 36.13 |
| EES07680 | Sorghum | golgi, vacuole | 67.03 | 35.84 |
| TraesCS2B01G281700.1 | Wheat | golgi, vacuole | 66.49 | 35.76 |
| EER90208 | Sorghum | vacuole | 66.49 | 35.55 |
| OQU85880 | Sorghum | golgi, vacuole | 66.49 | 35.55 |
| TraesCS7B01G040900.1 | Wheat | golgi, vacuole | 66.49 | 35.34 |
| TraesCS7B01G040400.1 | Wheat | golgi, vacuole | 66.49 | 35.34 |
| TraesCS3B01G338500.1 | Wheat | extracellular, golgi, vacuole | 64.32 | 34.69 |
| EES05427 | Sorghum | vacuole | 64.32 | 34.59 |
| Os07t0543600-00 | Rice | golgi, vacuole | 64.32 | 34.0 |
| GSMUA_Achr3P06240_001 | Banana | cytosol, mitochondrion, peroxisome, vacuole | 44.32 | 26.45 |
| TraesCS3B01G289800.1 | Wheat | vacuole | 47.57 | 26.19 |
| TraesCS5B01G382800.1 | Wheat | vacuole | 47.57 | 25.81 |
| TraesCS5B01G383000.1 | Wheat | vacuole | 47.03 | 25.66 |
| KRH63133 | Soybean | peroxisome, vacuole | 23.78 | 25.43 |
| TraesCS2B01G093000.1 | Wheat | golgi, vacuole | 47.03 | 25.36 |
| TraesCS2B01G092900.1 | Wheat | golgi, vacuole | 45.41 | 24.56 |
| TraesCS5B01G195300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 43.78 | 23.41 |
| GSMUA_Achr5P05340_001 | Banana | vacuole | 44.86 | 23.12 |
| TraesCS5B01G195400.1 | Wheat | vacuole | 44.86 | 22.8 |
| VIT_10s0042g00010.t01 | Wine grape | vacuole | 37.84 | 22.22 |
| VIT_10s0042g00020.t01 | Wine grape | vacuole | 37.84 | 21.74 |
| VIT_00s0575g00010.t01 | Wine grape | vacuole | 36.22 | 21.47 |
| VIT_13s0074g00080.t01 | Wine grape | vacuole | 37.3 | 21.43 |
| PGSC0003DMT400001736 | Potato | cytosol, peroxisome, vacuole | 31.35 | 20.94 |
| VIT_10s0042g00050.t01 | Wine grape | vacuole | 36.22 | 20.81 |
| VIT_00s0575g00020.t01 | Wine grape | vacuole | 36.22 | 20.81 |
| VIT_10s0071g00010.t01 | Wine grape | vacuole | 36.22 | 20.81 |
| Bra008125.1-P | Field mustard | cytosol, peroxisome, vacuole | 25.95 | 20.43 |
| VIT_10s0071g00020.t01 | Wine grape | vacuole | 33.51 | 20.06 |
| KRH07462 | Soybean | vacuole | 35.68 | 19.02 |
| PGSC0003DMT400056839 | Potato | vacuole | 31.89 | 18.91 |
| VIT_13s0074g00070.t01 | Wine grape | vacuole | 27.57 | 18.61 |
| PGSC0003DMT400063277 | Potato | vacuole | 32.97 | 18.37 |
| VIT_10s0042g00030.t01 | Wine grape | vacuole | 27.03 | 18.32 |
| VIT_17s0000g04600.t01 | Wine grape | vacuole | 33.51 | 18.08 |
| KRH45407 | Soybean | nucleus | 34.05 | 18.05 |
| Solyc12g039070.1.1 | Tomato | nucleus | 32.43 | 18.02 |
| Solyc03g114530.2.1 | Tomato | vacuole | 31.89 | 17.77 |
| CDY45861 | Canola | vacuole | 31.35 | 17.58 |
| AT1G74010.1 | Thale cress | vacuole | 30.81 | 17.54 |
| Solyc03g114560.2.1 | Tomato | extracellular | 30.81 | 17.43 |
| VIT_10s0071g00250.t01 | Wine grape | vacuole | 31.89 | 17.35 |
| CDX73037 | Canola | vacuole | 30.27 | 17.07 |
| AT1G74000.1 | Thale cress | vacuole | 30.27 | 17.02 |
| TraesCS5B01G133600.1 | Wheat | extracellular, vacuole | 34.05 | 16.84 |
| CDX96505 | Canola | vacuole | 29.73 | 16.77 |
| PGSC0003DMT400063286 | Potato | vacuole | 30.27 | 16.77 |
| Bra003820.1-P | Field mustard | vacuole | 29.19 | 16.72 |
| Solyc03g114540.1.1 | Tomato | vacuole | 30.27 | 16.67 |
| CDX96507 | Canola | vacuole | 29.19 | 16.56 |
| CDX73039 | Canola | vacuole | 29.19 | 16.56 |
| Bra015943.1-P | Field mustard | vacuole | 29.19 | 16.56 |
| TraesCS5B01G395100.1 | Wheat | vacuole | 35.68 | 16.54 |
| CDY47728 | Canola | vacuole | 29.19 | 16.51 |
| Bra008126.1-P | Field mustard | vacuole | 29.19 | 16.51 |
| Bra008127.1-P | Field mustard | vacuole | 29.19 | 16.46 |
| AT1G74020.1 | Thale cress | vacuole | 29.19 | 16.12 |
| PGSC0003DMT400063274 | Potato | vacuole | 29.19 | 16.07 |
| KRH54773 | Soybean | vacuole | 29.19 | 16.02 |
| CDY47729 | Canola | vacuole | 28.11 | 16.0 |
| CDX73038 | Canola | vacuole | 28.11 | 16.0 |
| CDX96506 | Canola | vacuole | 28.11 | 16.0 |
| CDY66188 | Canola | vacuole | 28.11 | 15.85 |
| CDX68204 | Canola | vacuole | 28.11 | 15.85 |
| VIT_17s0000g04610.t01 | Wine grape | vacuole | 31.35 | 15.8 |
| Bra008124.1-P | Field mustard | vacuole | 27.57 | 15.69 |
| KRH56734 | Soybean | vacuole | 28.65 | 15.5 |
| CDY45863 | Canola | vacuole | 27.03 | 15.38 |
| KRH03206 | Soybean | vacuole | 27.03 | 14.88 |
| Solyc03g114550.1.1 | Tomato | vacuole | 21.62 | 14.6 |
| TraesCS1B01G217600.1 | Wheat | extracellular, golgi, vacuole | 28.65 | 14.44 |
| CDY66189 | Canola | vacuole | 22.7 | 14.14 |
| TraesCS2B01G196600.1 | Wheat | golgi | 25.95 | 13.15 |
| TraesCS2B01G196500.1 | Wheat | golgi, vacuole | 25.95 | 13.08 |
| TraesCS4B01G215300.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 29.19 | 13.08 |
| VIT_17s0000g04590.t01 | Wine grape | endoplasmic reticulum, peroxisome, vacuole | 29.19 | 11.92 |
| VIT_17s0000g04580.t01 | Wine grape | extracellular, vacuole | 10.81 | 11.05 |
| Bra015944.1-P | Field mustard | vacuole | 26.49 | 8.21 |
| PGSC0003DMT400063282 | Potato | extracellular, vacuole | 3.78 | 4.52 |
| HORVU4Hr1G016850.1 | Barley | cytosol | 0.54 | 0.57 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G330900.1 | EnsemblPlantsGene:TraesCS5B01G330900 | Gene3D:2.120.10.30 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016844 | InterPro:6-blade_b-propeller_TolB-like | InterPro:IPR011042 | InterPro:Strictosidine_synth_cons-reg |
| InterPro:Strictosidine_synthase | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF28 | PFAM:PF03088 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF63829 | MapMan:50.4.3 | : | : | : | : |
Description
No Description!
Coordinates
chr5B:+:515187558..515188179
Molecular Weight (calculated)
20876.2 Da
IEP (calculated)
6.958
GRAVY (calculated)
-0.365
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVLLLWLLW QDVDRVDGVP LRFTNRVDFD QVTGQVYFTD SSMQYKRSQH EMVTKTGDST GRLMMYDPWT SDVTMLQAGM TYPNGVALPS INTCTSEPFV
101: GSPGYPDNVR PDRKGGYWVA LHHEKNELPI GRDSHLLVVR IGANGKIVEE MGPKGVRPTE IMERENGKLY LGSVELPYVG VVKRK
101: GSPGYPDNVR PDRKGGYWVA LHHEKNELPI GRDSHLLVVR IGANGKIVEE MGPKGVRPTE IMERENGKLY LGSVELPYVG VVKRK
001: MALFLSPKTI TLLFFSLSLA LYCSIDPFHH CAISDFPNFV SHEVISPRPD EVPWERDSQN SLQKSKILFF NQIQGPESVA FDSLGRGPYT GVADGRVLFW
101: DGEKWIDFAY TSSNRSEICD PKPSALSYLR NEHICGRPLG LRFDKRTGDL YIADAYMGLL KVGPEGGLAT PLVTEAEGVP LGFTNDLDIA DDGTVYFTDS
201: SISYQRRNFL QLVFSGDNTG RVLKYDPVAK KAVVLVSNLQ FPNGVSISRD GSFFVFCEGD IGSLRRYWLK GEKAGTTDVF AYLPGHPDNV RTNQKGEFWV
301: ALHCRRNYYS YLMARYPKLR MFILRLPITA RTHYSFQIGL RPHGLVVKYS PEGKLMHVLE DSEGKVVRSV SEVEEKDGKL WMGSVLMNFV AVYDL
101: DGEKWIDFAY TSSNRSEICD PKPSALSYLR NEHICGRPLG LRFDKRTGDL YIADAYMGLL KVGPEGGLAT PLVTEAEGVP LGFTNDLDIA DDGTVYFTDS
201: SISYQRRNFL QLVFSGDNTG RVLKYDPVAK KAVVLVSNLQ FPNGVSISRD GSFFVFCEGD IGSLRRYWLK GEKAGTTDVF AYLPGHPDNV RTNQKGEFWV
301: ALHCRRNYYS YLMARYPKLR MFILRLPITA RTHYSFQIGL RPHGLVVKYS PEGKLMHVLE DSEGKVVRSV SEVEEKDGKL WMGSVLMNFV AVYDL
Arabidopsis Description
At5g22020 [Source:UniProtKB/TrEMBL;Acc:Q9C586]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.