Factsheet for TraesCS5B01G195300.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G202700.1	Wheat	vacuole	97.4	97.4
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	95.09	95.09
TraesCS5A01G188300.1	Wheat	extracellular, plasma membrane, vacuole	95.38	87.53
Zm00001d020306_P001	Maize	endoplasmic reticulum, vacuole	73.41	74.05
EER96671	Sorghum	endoplasmic reticulum, golgi	73.41	72.57
TraesCS5B01G195400.1	Wheat	vacuole	59.25	56.32
TraesCS2B01G092900.1	Wheat	golgi, vacuole	51.16	51.75
TraesCS3B01G289800.1	Wheat	vacuole	50.0	51.49
TraesCS5B01G383000.1	Wheat	vacuole	49.71	50.74
TraesCS2B01G093000.1	Wheat	golgi, vacuole	50.29	50.73
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	45.09	50.32
TraesCS5B01G382800.1	Wheat	vacuole	48.84	49.56
TraesCS3B01G559000.1	Wheat	cytosol	26.59	49.2
TraesCS3B01G558800.1	Wheat	cytosol	29.19	48.33
TraesCS3B01G559100.1	Wheat	vacuole	47.69	47.83
TraesCS3B01G338500.1	Wheat	extracellular, golgi, vacuole	47.4	47.81
TraesCS7B01G040900.1	Wheat	golgi, vacuole	47.98	47.7
TraesCS2B01G281700.1	Wheat	golgi, vacuole	47.4	47.67
TraesCS7B01G040400.1	Wheat	golgi, vacuole	47.11	46.84
VIT_10s0042g00010.t01	Wine grape	vacuole	40.46	44.44
GSMUA_Achr5P05340_001	Banana	vacuole	45.66	44.01
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	29.77	43.83
TraesCS5B01G330900.1	Wheat	extracellular, vacuole	23.41	43.78
VIT_00s0575g00010.t01	Wine grape	vacuole	39.31	43.59
VIT_13s0074g00070.t01	Wine grape	vacuole	34.39	43.43
VIT_10s0042g00020.t01	Wine grape	vacuole	40.17	43.17
VIT_10s0071g00020.t01	Wine grape	vacuole	38.44	43.04
VIT_13s0074g00080.t01	Wine grape	vacuole	39.88	42.86
VIT_00s0575g00020.t01	Wine grape	vacuole	39.31	42.24
VIT_10s0042g00050.t01	Wine grape	vacuole	39.31	42.24
VIT_10s0071g00010.t01	Wine grape	vacuole	39.31	42.24
VIT_10s0042g00030.t01	Wine grape	vacuole	33.24	42.12
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	21.68	41.44
VIT_17s0000g04600.t01	Wine grape	vacuole	40.75	41.11
PGSC0003DMT400056839	Potato	vacuole	35.84	39.74
CDY47729	Canola	vacuole	37.28	39.69
Bra008124.1-P	Field mustard	vacuole	36.99	39.38
PGSC0003DMT400063282	Potato	extracellular, vacuole	17.63	39.35
AT1G74010.1	Thale cress	vacuole	36.71	39.08
CDY45863	Canola	vacuole	36.71	39.08
CDX96505	Canola	vacuole	36.71	38.72
CDX73037	Canola	vacuole	36.71	38.72
KRH07462	Soybean	vacuole	38.44	38.33
Solyc03g114550.1.1	Tomato	vacuole	30.35	38.32
VIT_10s0071g00250.t01	Wine grape	vacuole	37.57	38.24
AT1G74000.1	Thale cress	vacuole	35.84	37.69
CDX96506	Canola	vacuole	34.97	37.23
CDX73038	Canola	vacuole	34.97	37.23
KRH54773	Soybean	vacuole	36.13	37.09
KRH45407	Soybean	nucleus	37.28	36.96
Bra008127.1-P	Field mustard	vacuole	34.97	36.89
TraesCS5B01G395100.1	Wheat	vacuole	42.2	36.59
Bra003820.1-P	Field mustard	vacuole	34.1	36.53
Bra008126.1-P	Field mustard	vacuole	34.39	36.39
CDY47728	Canola	vacuole	34.39	36.39
Solyc12g039070.1.1	Tomato	nucleus	34.97	36.34
AT1G74020.1	Thale cress	vacuole	34.97	36.12
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	28.9	36.1
CDY45861	Canola	vacuole	34.39	36.06
KRH03206	Soybean	vacuole	34.97	36.01
CDX96507	Canola	vacuole	33.81	35.89
CDX73039	Canola	vacuole	33.81	35.89
Bra015943.1-P	Field mustard	vacuole	33.81	35.89
KRH56734	Soybean	vacuole	35.26	35.67
PGSC0003DMT400063274	Potato	vacuole	34.39	35.42
CDY66188	Canola	vacuole	33.53	35.37
CDY66189	Canola	vacuole	30.35	35.35
Solyc03g114560.2.1	Tomato	extracellular	33.24	35.17
CDX68204	Canola	vacuole	33.24	35.06
PGSC0003DMT400063277	Potato	vacuole	33.53	34.94
Solyc03g114540.1.1	Tomato	vacuole	33.81	34.82
PGSC0003DMT400063286	Potato	vacuole	33.24	34.43
KRH63133	Soybean	peroxisome, vacuole	17.05	34.1
Solyc03g114530.2.1	Tomato	vacuole	32.66	34.04
TraesCS5B01G133600.1	Wheat	extracellular, vacuole	36.13	33.42
VIT_17s0000g04610.t01	Wine grape	vacuole	35.26	33.24
TraesCS4B01G215300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	38.15	31.96
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	39.88	30.46
TraesCS1B01G217600.1	Wheat	extracellular, golgi, vacuole	28.03	26.43
TraesCS2B01G196500.1	Wheat	golgi, vacuole	25.72	24.25
TraesCS2B01G196600.1	Wheat	golgi	25.14	23.84
Bra015944.1-P	Field mustard	vacuole	34.39	19.93

Protein Annotations

EnsemblPlants:TraesCS5B01G195300.1	EnsemblPlantsGene:TraesCS5B01G195300	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF60	PFAM:PF03088	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF63829	TMHMM:TMhelix	MapMan:50.4.3	:	:	:

Description

No Description!

Coordinates

chr5B:+:352577370..352578992

Molecular Weight (calculated)

37095.1 Da

IEP (calculated)

8.062

GRAVY (calculated)

-0.103

Length

346 amino acids

Sequence
(BLAST)

001: MAYSCLPLYA PSFLVVLLVL PLMAVASAAA PAAETSYETK SLDPGLALMT LPQPVSGPES LAFDRRGGGP YAGVSDGRVF KWRGRRLGWT EFAYNSRHKS
101: VGMCAAKKKL VVPESVCGRP LGLQFHHKSG DLYVADAYLG LMRVPARGGL AQVVATEAGG VPFNFLNGLD VDQKTGDVYF TDSSSTYRRS EYLLVVALGD
201: ETGRLLRYNP RTRRVTVLHA DLSYPNGVAV SADGSHVVVS HTALSELRRY WVRGPKAGTN ETFAELPGFP DNVRSDGRGG YWVALTHGGD DGVAAPTVAV
301: RVGRDGAVEE ALGGFSFETV SEVGERNGTL WVGSVDTPYA GELKRY

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.