Factsheet for TraesCS7B01G040400.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G040900.1	Wheat	golgi, vacuole	97.99	97.99
TraesCS7A01G138300.1	Wheat	cytosol	58.62	97.61
TraesCS7D01G140000.1	Wheat	golgi, vacuole	96.84	96.84
TraesCS7A01G138700.1	Wheat	cytosol	57.76	96.17
TraesCS7D01G139900.1	Wheat	vacuole	95.98	95.98
HORVU7Hr1G028580.1	Barley	golgi, vacuole	94.25	93.18
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	90.8	88.76
TraesCS2B01G281700.1	Wheat	golgi, vacuole	83.33	84.3
TraesCS3B01G558800.1	Wheat	cytosol	45.98	76.56
TraesCS3B01G559000.1	Wheat	cytosol	40.8	75.94
TraesCS3B01G559100.1	Wheat	vacuole	68.97	69.57
TraesCS5B01G330900.1	Wheat	extracellular, vacuole	35.34	66.49
TraesCS3B01G338500.1	Wheat	extracellular, golgi, vacuole	64.94	65.89
TraesCS2B01G092900.1	Wheat	golgi, vacuole	49.43	50.29
TraesCS3B01G289800.1	Wheat	vacuole	48.28	50.0
TraesCS2B01G093000.1	Wheat	golgi, vacuole	48.56	49.27
TraesCS5B01G382800.1	Wheat	vacuole	47.7	48.68
TraesCS5B01G383000.1	Wheat	vacuole	47.41	48.67
TraesCS5B01G195300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	46.84	47.11
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	40.52	45.48
TraesCS5B01G195400.1	Wheat	vacuole	46.55	44.51
GSMUA_Achr5P05340_001	Banana	vacuole	42.53	41.23
VIT_13s0074g00070.t01	Wine grape	vacuole	31.61	40.15
PGSC0003DMT400063282	Potato	extracellular, vacuole	17.82	40.0
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	20.69	39.78
VIT_10s0042g00030.t01	Wine grape	vacuole	30.75	39.19
VIT_13s0074g00080.t01	Wine grape	vacuole	36.21	39.13
VIT_10s0042g00010.t01	Wine grape	vacuole	35.34	39.05
VIT_00s0575g00010.t01	Wine grape	vacuole	34.77	38.78
VIT_10s0071g00020.t01	Wine grape	vacuole	34.2	38.51
VIT_00s0575g00020.t01	Wine grape	vacuole	35.63	38.51
VIT_10s0042g00020.t01	Wine grape	vacuole	35.34	38.2
VIT_10s0042g00050.t01	Wine grape	vacuole	35.34	38.2
VIT_10s0071g00010.t01	Wine grape	vacuole	35.06	37.89
PGSC0003DMT400056839	Potato	vacuole	33.33	37.18
VIT_10s0071g00250.t01	Wine grape	vacuole	35.63	36.47
KRH07462	Soybean	vacuole	35.63	35.73
VIT_17s0000g04600.t01	Wine grape	vacuole	34.77	35.28
Solyc03g114560.2.1	Tomato	extracellular	32.47	34.56
KRH45407	Soybean	nucleus	34.48	34.38
TraesCS5B01G395100.1	Wheat	vacuole	39.37	34.34
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	27.3	34.3
Solyc12g039070.1.1	Tomato	nucleus	32.76	34.23
Solyc03g114550.1.1	Tomato	vacuole	26.72	33.94
CDX73037	Canola	vacuole	31.9	33.84
CDX96505	Canola	vacuole	31.9	33.84
AT1G74010.1	Thale cress	vacuole	31.32	33.54
PGSC0003DMT400063277	Potato	vacuole	31.9	33.43
TraesCS5B01G133600.1	Wheat	extracellular, vacuole	35.92	33.42
KRH03206	Soybean	vacuole	31.61	32.74
Bra003820.1-P	Field mustard	vacuole	30.17	32.51
Solyc03g114540.1.1	Tomato	vacuole	31.32	32.44
PGSC0003DMT400063274	Potato	vacuole	31.32	32.44
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	21.84	32.34
PGSC0003DMT400063286	Potato	vacuole	31.03	32.34
Solyc03g114530.2.1	Tomato	vacuole	30.75	32.23
KRH56734	Soybean	vacuole	31.61	32.16
KRH54773	Soybean	vacuole	31.03	32.05
CDY66189	Canola	vacuole	27.3	31.99
VIT_17s0000g04610.t01	Wine grape	vacuole	33.62	31.88
CDY47728	Canola	vacuole	29.89	31.8
TraesCS4B01G215300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	37.64	31.72
CDY45861	Canola	vacuole	29.89	31.52
Bra008126.1-P	Field mustard	vacuole	29.6	31.5
Bra008127.1-P	Field mustard	vacuole	29.6	31.4
CDY47729	Canola	vacuole	29.02	31.08
CDX96507	Canola	vacuole	29.02	30.98
Bra015943.1-P	Field mustard	vacuole	29.02	30.98
Bra008124.1-P	Field mustard	vacuole	28.74	30.77
AT1G74020.1	Thale cress	vacuole	29.6	30.75
AT1G74000.1	Thale cress	vacuole	29.02	30.7
CDX73039	Canola	vacuole	28.74	30.67
CDX68204	Canola	vacuole	28.74	30.49
CDY45863	Canola	vacuole	28.45	30.46
CDY66188	Canola	vacuole	28.45	30.18
CDX73038	Canola	vacuole	27.87	29.85
CDX96506	Canola	vacuole	27.87	29.85
TraesCS1B01G217600.1	Wheat	extracellular, golgi, vacuole	27.87	26.43
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	34.2	26.27
KRH63133	Soybean	peroxisome, vacuole	12.64	25.43
TraesCS2B01G196600.1	Wheat	golgi	26.15	24.93
TraesCS2B01G196500.1	Wheat	golgi, vacuole	25.86	24.52
Bra015944.1-P	Field mustard	vacuole	27.59	16.08

Protein Annotations

EnsemblPlants:TraesCS7B01G040400.1	EnsemblPlantsGene:TraesCS7B01G040400	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF28	PFAM:PF03088	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF63829	TMHMM:TMhelix	MapMan:50.4.3	:	:	:

Description

No Description!

Coordinates

chr7B:+:40346759..40352481

Molecular Weight (calculated)

37793.3 Da

IEP (calculated)

9.166

GRAVY (calculated)

-0.208

Length

348 amino acids

Sequence
(BLAST)

001: MASGTRGVAA ATISLAVLLL IFCFSPTTVA AAGVPSIDAT RTRHLPLPRG LLRGPESVAF DAKGQGPYSG VSDGRVLKWN GDKLGWSTYT YNPDYSSEAC
101: TASLLRPETV TEGHCGRPLG LRFHLKSGYL YIADAYKGLM RVAPGGGEAT VLVTEVDGVP LRFTNGVDID QVTGEVYFTD SSSNYNRSQH EMVTRTGDST
201: GRLLRYDPRT GKAVVLQADI TYPNGLAINA DRTHLVISST GPCKLLRYWI KGSKAGTMEL FADLPGYPDN VRPDKKGGYW VALHREKAEL PFGVDSHLLA
301: LRIDAEGKII EEMRGPKSVR PTEVVERKGG RLFMGSVELH YVSVVTRK

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.