Factsheet for TraesCS7D01G139900.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G138300.1	Wheat	cytosol	58.91	98.09
TraesCS7D01G140000.1	Wheat	golgi, vacuole	97.41	97.41
TraesCS7B01G040400.1	Wheat	golgi, vacuole	95.98	95.98
TraesCS7B01G040900.1	Wheat	golgi, vacuole	95.69	95.69
TraesCS7D01G140500.1	Wheat	golgi, vacuole	93.39	94.2
HORVU7Hr1G028580.1	Barley	golgi, vacuole	94.25	93.18
TraesCS7D01G140600.1	Wheat	endoplasmic reticulum, plasma membrane	80.75	91.53
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	90.8	88.76
TraesCS7D01G076600.1	Wheat	cytosol	45.4	75.6
TraesCS7D01G076500.1	Wheat	cytosol	39.08	71.58
TraesCS3D01G504000.1	Wheat	vacuole	69.83	70.43
TraesCS3D01G503900.1	Wheat	nucleus	62.93	70.42
EES05895	Sorghum	golgi, vacuole	69.83	70.23
EES07680	Sorghum	golgi, vacuole	69.54	69.94
TraesCS3D01G303900.1	Wheat	cytosol	64.08	69.69
EER90208	Sorghum	vacuole	69.25	69.65
EES05427	Sorghum	vacuole	68.68	69.48
OQU85880	Sorghum	golgi, vacuole	68.97	69.36
TraesCS7D01G075900.1	Wheat	vacuole	68.39	68.99
TraesCS7D01G076000.1	Wheat	vacuole	64.94	66.28
Os07t0543600-00	Rice	golgi, vacuole	63.79	63.43
TraesCS2D01G076000.1	Wheat	golgi, vacuole	50.0	50.73
TraesCS2D01G076400.1	Wheat	vacuole	49.14	49.85
TraesCS2D01G076200.1	Wheat	vacuole	49.14	49.85
TraesCS2D01G076300.1	Wheat	vacuole	47.99	48.27
TraesCS3D01G256900.1	Wheat	mitochondrion, plastid	48.85	47.62
TraesCS5D01G202700.1	Wheat	vacuole	47.13	47.4
TraesCS5D01G389100.1	Wheat	plastid, vacuole	48.28	47.32
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	40.8	45.81
TraesCS5D01G202800.1	Wheat	golgi, vacuole	47.13	45.05
TraesCS7D01G076300.1	Wheat	vacuole	46.55	44.88
GSMUA_Achr5P05340_001	Banana	vacuole	43.1	41.78
VIT_13s0074g00070.t01	Wine grape	vacuole	31.32	39.78
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	20.69	39.78
VIT_10s0042g00010.t01	Wine grape	vacuole	35.63	39.37
PGSC0003DMT400063282	Potato	extracellular, vacuole	17.53	39.35
VIT_10s0042g00030.t01	Wine grape	vacuole	30.46	38.83
VIT_13s0074g00080.t01	Wine grape	vacuole	35.92	38.82
VIT_00s0575g00010.t01	Wine grape	vacuole	34.48	38.46
VIT_00s0575g00020.t01	Wine grape	vacuole	35.34	38.2
VIT_10s0071g00020.t01	Wine grape	vacuole	33.91	38.19
VIT_10s0042g00050.t01	Wine grape	vacuole	35.06	37.89
VIT_10s0042g00020.t01	Wine grape	vacuole	35.06	37.89
VIT_10s0071g00010.t01	Wine grape	vacuole	34.77	37.58
PGSC0003DMT400056839	Potato	vacuole	33.33	37.18
KRH07462	Soybean	vacuole	36.49	36.6
VIT_10s0071g00250.t01	Wine grape	vacuole	35.34	36.18
VIT_17s0000g04600.t01	Wine grape	vacuole	35.06	35.57
KRH45407	Soybean	nucleus	35.06	34.96
CDX73037	Canola	vacuole	32.76	34.76
TraesCS5D01G400000.1	Wheat	golgi	39.66	34.67
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	27.59	34.66
Solyc03g114560.2.1	Tomato	extracellular	32.47	34.56
Solyc12g039070.1.1	Tomato	nucleus	33.05	34.53
CDX96505	Canola	vacuole	32.47	34.45
KRH03206	Soybean	vacuole	32.76	33.93
AT1G74010.1	Thale cress	vacuole	31.61	33.85
PGSC0003DMT400063277	Potato	vacuole	32.18	33.73
TraesCS5D01G139700.1	Wheat	vacuole	35.63	33.24
Solyc03g114550.1.1	Tomato	vacuole	26.15	33.21
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	22.41	33.19
KRH56734	Soybean	vacuole	32.47	33.04
KRH54773	Soybean	vacuole	31.9	32.94
PGSC0003DMT400063274	Potato	vacuole	31.61	32.74
Solyc03g114530.2.1	Tomato	vacuole	31.03	32.53
Bra003820.1-P	Field mustard	vacuole	30.17	32.51
Solyc03g114540.1.1	Tomato	vacuole	31.32	32.44
VIT_17s0000g04610.t01	Wine grape	vacuole	34.2	32.43
PGSC0003DMT400063286	Potato	vacuole	31.03	32.34
CDY47728	Canola	vacuole	30.17	32.11
CDY66189	Canola	vacuole	27.3	31.99
CDY45861	Canola	vacuole	30.17	31.82
Bra008126.1-P	Field mustard	vacuole	29.89	31.8
Bra008127.1-P	Field mustard	vacuole	29.89	31.71
CDY47729	Canola	vacuole	29.6	31.69
TraesCS4D01G215800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	37.36	31.48
Bra008124.1-P	Field mustard	vacuole	29.31	31.38
CDY45863	Canola	vacuole	29.02	31.08
AT1G74020.1	Thale cress	vacuole	29.89	31.04
AT1G74000.1	Thale cress	vacuole	29.31	31.0
CDX96507	Canola	vacuole	29.02	30.98
Bra015943.1-P	Field mustard	vacuole	29.02	30.98
CDX73039	Canola	vacuole	28.74	30.67
CDX68204	Canola	vacuole	28.74	30.49
CDX73038	Canola	vacuole	28.45	30.46
CDX96506	Canola	vacuole	28.45	30.46
CDY66188	Canola	vacuole	28.45	30.18
TraesCS1D01G207200.2	Wheat	extracellular, golgi, vacuole	29.02	27.52
TraesCS2D01G177900.2	Wheat	golgi	28.16	26.85
KRH63133	Soybean	peroxisome, vacuole	13.22	26.59
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	34.48	26.49
TraesCS2D01G177700.1	Wheat	plasma membrane, vacuole	27.87	26.43
Bra015944.1-P	Field mustard	vacuole	28.16	16.42

Protein Annotations

EnsemblPlants:TraesCS7D01G139900.1	EnsemblPlantsGene:TraesCS7D01G139900	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF28	PFAM:PF03088	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF63829	TMHMM:TMhelix	MapMan:50.4.3	:	:	:

Description

No Description!

Coordinates

chr7D:+:89486437..89487483

Molecular Weight (calculated)

37823.2 Da

IEP (calculated)

9.170

GRAVY (calculated)

-0.211

Length

348 amino acids

Sequence
(BLAST)

001: MASGTRGVAA ATISLAVLLL VFCFSPSTAA AAAVPSIDAT WTRHLPLPRG LLRGPESVAF DAKGQGPYSG VSDGRVLKWN GDTLGWSTYT YNPDYSSEAC
101: TASLLRPETA TEGHCGRPLG LRFHLKSGYL YIADAYKGLM RVAPGGGEAT VLVTEVDGVP LRFTNGVDID QVTGEVYFTD SSRNYNRSQH EMVTRTGDST
201: GRLLRYDPRT GKAVVLQADV TYPNGLAISA DRTHLIISST GPCKLLRYWI KGSKAGTMEL FADLPGYPDN VRPDKKGRYW VALHREKAEL PFGVDSHLLA
301: LRIDADGKII EEMRGPKGVR PTEVVERKGG RLFMGSVELH YVSVVTRK

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.