Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G133600.1 | Wheat | extracellular, vacuole | 97.32 | 97.06 |
| TraesCS5A01G131200.1 | Wheat | vacuole | 65.15 | 96.05 |
| HORVU5Hr1G043200.4 | Barley | vacuole | 94.91 | 94.65 |
| EES07950 | Sorghum | vacuole | 65.95 | 62.76 |
| KXG27696 | Sorghum | vacuole | 65.42 | 62.56 |
| Os12t0138800-01 | Rice | golgi, mitochondrion, plasma membrane, vacuole | 68.36 | 59.3 |
| Os11t0142400-01 | Rice | extracellular | 13.14 | 53.85 |
| Zm00001d052471_P001 | Maize | vacuole | 64.08 | 49.18 |
| VIT_08s0007g05360.t01 | Wine grape | vacuole | 43.7 | 43.12 |
| Bra000222.1-P | Field mustard | cytosol | 38.34 | 41.45 |
| CDX79944 | Canola | vacuole | 41.02 | 40.8 |
| CDY23858 | Canola | vacuole | 40.75 | 40.64 |
| Bra004613.1-P | Field mustard | vacuole | 40.75 | 40.53 |
| CDY22515 | Canola | vacuole | 37.8 | 40.4 |
| CDY35420 | Canola | vacuole | 37.0 | 39.43 |
| AT2G41290.1 | Thale cress | vacuole | 39.68 | 39.36 |
| KRH66810 | Soybean | vacuole | 40.21 | 39.27 |
| TraesCS3D01G303900.1 | Wheat | cytosol | 32.98 | 38.44 |
| TraesCS7D01G076600.1 | Wheat | cytosol | 20.91 | 37.32 |
| TraesCS3D01G503900.1 | Wheat | nucleus | 31.1 | 37.3 |
| TraesCS7D01G140500.1 | Wheat | golgi, vacuole | 33.78 | 36.52 |
| TraesCS5D01G202700.1 | Wheat | vacuole | 33.78 | 36.42 |
| TraesCS7D01G076500.1 | Wheat | cytosol | 18.5 | 36.32 |
| TraesCS3D01G504000.1 | Wheat | vacuole | 33.51 | 36.23 |
| TraesCS7D01G140000.1 | Wheat | golgi, vacuole | 33.78 | 36.21 |
| TraesCS2D01G076000.1 | Wheat | golgi, vacuole | 33.24 | 36.15 |
| TraesCS7D01G075900.1 | Wheat | vacuole | 33.24 | 35.94 |
| TraesCS7D01G139900.1 | Wheat | vacuole | 33.24 | 35.63 |
| TraesCS2D01G076200.1 | Wheat | vacuole | 32.71 | 35.57 |
| TraesCS2D01G076400.1 | Wheat | vacuole | 32.44 | 35.28 |
| PGSC0003DMT400048627 | Potato | cytosol, golgi, mitochondrion, vacuole | 32.17 | 35.19 |
| TraesCS3D01G256900.1 | Wheat | mitochondrion, plastid | 33.51 | 35.01 |
| TraesCS7D01G076300.1 | Wheat | vacuole | 33.78 | 34.9 |
| TraesCS7D01G076000.1 | Wheat | vacuole | 31.9 | 34.9 |
| TraesCS5D01G202800.1 | Wheat | golgi, vacuole | 34.05 | 34.89 |
| TraesCS7D01G140600.1 | Wheat | endoplasmic reticulum, plasma membrane | 28.69 | 34.85 |
| TraesCS2D01G076300.1 | Wheat | vacuole | 31.9 | 34.39 |
| TraesCS5D01G400000.1 | Wheat | golgi | 36.46 | 34.17 |
| TraesCS5D01G389100.1 | Wheat | plastid, vacuole | 32.44 | 34.08 |
| TraesCS4D01G215800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 35.39 | 31.96 |
| TraesCS2D01G177700.1 | Wheat | plasma membrane, vacuole | 25.2 | 25.61 |
| TraesCS2D01G177900.2 | Wheat | golgi | 24.66 | 25.21 |
| TraesCS1D01G207200.2 | Wheat | extracellular, golgi, vacuole | 22.52 | 22.89 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G139700.1 | EnsemblPlantsGene:TraesCS5D01G139700 | Gene3D:2.120.10.30 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016844 | InterPro:6-blade_b-propeller_TolB-like | InterPro:IPR011042 | InterPro:Strictosidine_synth_cons-reg |
| InterPro:Strictosidine_synthase | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF22 | PFAM:PF03088 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF63829 | TMHMM:TMhelix | MapMan:50.4.3 | : | : | : |
Description
No Description!
Coordinates
chr5D:+:223229484..223232065
Molecular Weight (calculated)
40798.1 Da
IEP (calculated)
6.945
GRAVY (calculated)
-0.068
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MTISCRLVAV AVALALAAAL LSSSPLRGDV RAVVEIRDVE LIPVDGGAAG PESVAFGVGG EGPYAGVSDG RVIRWLPEEG RWVEHSSAAA PELLDSCRGS
101: QDPMKEHECG RPLGLKFNNK TGELYVADSY FGLRVVSPGD NVSRLIGPGQ PGRPYSFANG VEIDQETGVV YFTETSTRFQ RRQFLNIVIS GDATGRLLKY
201: DPNTNEVQVL VDGLAFPNGL LMSEGGSHLL LAETTTCMIH RYWLKTPKAS TLEELVQLPG FPDNIKASPR GGFWVGLHGK RGKIAEWSTS FPWLRRLVMK
301: LPPQRVQRVM AFLSRFGSQV IALRVSEEGK VLEEVIVHDA ARKMFGSISE LEERDGRLWI GSVHLPFLGH YCL
101: QDPMKEHECG RPLGLKFNNK TGELYVADSY FGLRVVSPGD NVSRLIGPGQ PGRPYSFANG VEIDQETGVV YFTETSTRFQ RRQFLNIVIS GDATGRLLKY
201: DPNTNEVQVL VDGLAFPNGL LMSEGGSHLL LAETTTCMIH RYWLKTPKAS TLEELVQLPG FPDNIKASPR GGFWVGLHGK RGKIAEWSTS FPWLRRLVMK
301: LPPQRVQRVM AFLSRFGSQV IALRVSEEGK VLEEVIVHDA ARKMFGSISE LEERDGRLWI GSVHLPFLGH YCL
001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL
Arabidopsis Description
SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.