Factsheet for TraesCS5D01G202800.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G188200.1	Wheat	vacuole	96.15	96.42
TraesCS5B01G195400.1	Wheat	vacuole	95.6	95.6
HORVU5Hr1G058940.2	Barley	vacuole	93.68	92.92
TraesCS7D01G076300.1	Wheat	vacuole	81.32	81.99
Zm00001d020308_P001	Maize	cytosol, plastid, vacuole	31.32	70.81
Os09t0374900-00	Rice	cytosol, golgi, plastid, vacuole	71.7	68.32
EER96672	Sorghum	vacuole	68.41	68.03
Zm00001d020307_P001	Maize	endoplasmic reticulum, vacuole	37.36	66.02
TraesCS5D01G202700.1	Wheat	vacuole	54.67	57.51
TraesCS7D01G076500.1	Wheat	cytosol	27.75	53.16
TraesCS7D01G076600.1	Wheat	cytosol	30.49	53.11
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	44.78	52.58
TraesCS3D01G303900.1	Wheat	cytosol	44.78	50.94
TraesCS3D01G503900.1	Wheat	nucleus	43.41	50.8
TraesCS3D01G504000.1	Wheat	vacuole	46.98	49.57
TraesCS2D01G076200.1	Wheat	vacuole	45.88	48.69
GSMUA_Achr5P05340_001	Banana	vacuole	47.8	48.47
TraesCS2D01G076000.1	Wheat	golgi, vacuole	45.6	48.4
TraesCS7D01G075900.1	Wheat	vacuole	45.33	47.83
TraesCS2D01G076400.1	Wheat	vacuole	45.05	47.81
TraesCS7D01G076000.1	Wheat	vacuole	44.23	47.21
TraesCS7D01G139900.1	Wheat	vacuole	45.05	47.13
TraesCS2D01G076300.1	Wheat	vacuole	44.78	47.11
TraesCS7D01G140000.1	Wheat	golgi, vacuole	44.78	46.84
TraesCS7D01G140500.1	Wheat	golgi, vacuole	44.23	46.67
TraesCS3D01G256900.1	Wheat	mitochondrion, plastid	45.33	46.22
TraesCS5D01G389100.1	Wheat	plastid, vacuole	44.78	45.92
VIT_10s0042g00010.t01	Wine grape	vacuole	36.81	42.54
TraesCS7D01G140600.1	Wheat	endoplasmic reticulum, plasma membrane	35.44	42.02
VIT_00s0575g00010.t01	Wine grape	vacuole	35.99	41.99
VIT_13s0074g00070.t01	Wine grape	vacuole	31.59	41.97
VIT_13s0074g00080.t01	Wine grape	vacuole	36.54	41.3
VIT_10s0042g00020.t01	Wine grape	vacuole	36.26	40.99
VIT_10s0042g00050.t01	Wine grape	vacuole	36.26	40.99
VIT_10s0071g00020.t01	Wine grape	vacuole	34.62	40.78
VIT_00s0575g00020.t01	Wine grape	vacuole	35.99	40.68
PGSC0003DMT400056839	Potato	vacuole	34.62	40.38
VIT_10s0071g00010.t01	Wine grape	vacuole	35.71	40.37
VIT_10s0042g00030.t01	Wine grape	vacuole	30.22	40.29
VIT_10s0071g00250.t01	Wine grape	vacuole	37.36	40.0
KRH07462	Soybean	vacuole	37.09	38.9
CDX96505	Canola	vacuole	34.62	38.41
KRH45407	Soybean	nucleus	36.81	38.4
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	18.68	37.57
Solyc12g039070.1.1	Tomato	nucleus	34.34	37.54
CDX73037	Canola	vacuole	33.79	37.5
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	28.02	36.82
VIT_17s0000g04600.t01	Wine grape	vacuole	34.62	36.73
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	23.35	36.17
PGSC0003DMT400063282	Potato	extracellular, vacuole	15.38	36.13
TraesCS5D01G400000.1	Wheat	golgi	39.01	35.68
Solyc03g114550.1.1	Tomato	vacuole	26.65	35.4
Solyc03g114560.2.1	Tomato	extracellular	31.59	35.17
AT1G74010.1	Thale cress	vacuole	30.77	34.46
Bra008127.1-P	Field mustard	vacuole	31.04	34.45
TraesCS5D01G139700.1	Wheat	vacuole	34.89	34.05
CDY47728	Canola	vacuole	30.49	33.95
PGSC0003DMT400063274	Potato	vacuole	31.32	33.93
PGSC0003DMT400063286	Potato	vacuole	31.04	33.83
Bra008126.1-P	Field mustard	vacuole	30.22	33.64
Solyc03g114540.1.1	Tomato	vacuole	31.04	33.63
PGSC0003DMT400063277	Potato	vacuole	30.49	33.43
KRH03206	Soybean	vacuole	30.77	33.33
CDY45861	Canola	vacuole	30.22	33.33
KRH54773	Soybean	vacuole	30.77	33.23
Solyc03g114530.2.1	Tomato	vacuole	30.22	33.13
Bra003820.1-P	Field mustard	vacuole	29.4	33.13
KRH56734	Soybean	vacuole	31.04	33.04
KRH63133	Soybean	peroxisome, vacuole	15.66	32.95
CDX96506	Canola	vacuole	29.4	32.92
Bra015943.1-P	Field mustard	vacuole	29.4	32.82
CDX96507	Canola	vacuole	29.4	32.82
CDX73038	Canola	vacuole	29.12	32.62
AT1G74000.1	Thale cress	vacuole	29.4	32.52
CDX73039	Canola	vacuole	29.12	32.52
CDY47729	Canola	vacuole	28.85	32.31
AT1G74020.1	Thale cress	vacuole	29.67	32.24
TraesCS4D01G215800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	36.54	32.2
VIT_17s0000g04610.t01	Wine grape	vacuole	32.42	32.15
CDX68204	Canola	vacuole	28.85	32.01
CDY66188	Canola	vacuole	28.85	32.01
Bra008124.1-P	Field mustard	vacuole	28.57	32.0
CDY45863	Canola	vacuole	28.3	31.69
CDY66189	Canola	vacuole	25.27	30.98
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	34.89	28.04
TraesCS2D01G177900.2	Wheat	golgi	26.37	26.3
TraesCS2D01G177700.1	Wheat	plasma membrane, vacuole	25.82	25.61
TraesCS1D01G207200.2	Wheat	extracellular, golgi, vacuole	25.55	25.34
Bra015944.1-P	Field mustard	vacuole	28.85	17.59

Protein Annotations

EnsemblPlants:TraesCS5D01G202800.1	EnsemblPlantsGene:TraesCS5D01G202800	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF31	PFAM:PF03088	SignalP:SignalP-noTM	SUPFAM:SSF63829
TMHMM:TMhelix	MapMan:50.4.3	:	:	:	:

Description

No Description!

Coordinates

chr5D:+:308217618..308220919

Molecular Weight (calculated)

39481.0 Da

IEP (calculated)

8.139

GRAVY (calculated)

-0.177

Length

364 amino acids

Sequence
(BLAST)

001: MEEARHCRSA TLLMPFLSLA FLIWLPPMAA ATQEMKSIYA GSRVIPVRLA RPAFGPESIV FDHRGGGPYT GVSNGRVLRW RGNRRHRGWT EFAHNYKHKT
101: VAECAAKKKV VEPESACGRP LGLQFHHASG DMYIADAYLG LMRVGRCGGL AEVVATEADG LPFNFLNGVD VDQETGEVYF TDSSTVYQRS EYMLVVLTGD
201: ATGRLMRYDP RTGNVTVLRS GLAFPNGVAL SADRTHLVVA ETSSCRLLRH WLRGPAAGET EVLADLPGYP DNVRHDGGGR GGYWVGMNRD KQWAESGTTA
301: NSMSAVRVVA AGDATNGTVV EALRGFGDAT VSEVVERNGS LWIGSVDTPY VGLFKLASLP QCRG

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.