Factsheet for Solyc12g039070.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 5
vacuole 7
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	vacuole

nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400056839	Potato	vacuole	85.29	91.03
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	70.87	85.2
Solyc03g114530.2.1	Tomato	vacuole	55.86	56.02
Solyc03g114540.1.1	Tomato	vacuole	54.05	53.57
Solyc03g114560.2.1	Tomato	extracellular	51.65	52.6
Solyc03g114550.1.1	Tomato	vacuole	42.34	51.46
VIT_17s0000g04600.t01	Wine grape	vacuole	47.45	46.06
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	29.73	42.13
Zm00001d029115_P001	Maize	extracellular, vacuole	29.43	41.88
KRH54773	Soybean	vacuole	41.74	41.25
CDX73037	Canola	vacuole	40.24	40.85
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	37.84	40.65
CDX96505	Canola	vacuole	39.34	39.94
Bra008127.1-P	Field mustard	vacuole	39.04	39.63
KRH03206	Soybean	vacuole	39.94	39.58
HORVU2Hr1G013460.2	Barley	golgi, mitochondrion, vacuole	34.23	39.18
AT1G74010.1	Thale cress	vacuole	38.14	39.08
KRH63133	Soybean	peroxisome, vacuole	20.12	38.73
AT1G74020.1	Thale cress	vacuole	38.74	38.51
TraesCS3A01G298200.1	Wheat	cytosol	36.64	38.49
AT1G74000.1	Thale cress	vacuole	37.84	38.3
CDY45861	Canola	vacuole	37.84	38.18
Solyc07g055740.1.1	Tomato	vacuole	40.24	38.18
CDX73038	Canola	vacuole	37.24	38.15
CDY47729	Canola	vacuole	37.24	38.15
KRH56734	Soybean	vacuole	39.04	38.01
TraesCS3B01G559000.1	Wheat	cytosol	21.32	37.97
Bra008126.1-P	Field mustard	vacuole	37.24	37.92
CDY47728	Canola	vacuole	37.24	37.92
Bra008124.1-P	Field mustard	vacuole	36.94	37.85
CDY45863	Canola	vacuole	36.94	37.85
Bra015943.1-P	Field mustard	vacuole	36.94	37.73
CDX96507	Canola	vacuole	36.94	37.73
CDX96506	Canola	vacuole	36.64	37.54
HORVU6Hr1G026020.1	Barley	cytosol	27.93	37.5
TraesCS3D01G303900.1	Wheat	cytosol	36.04	37.5
Zm00001d029117_P001	Maize	vacuole	37.84	37.28
OQU75879	Sorghum	vacuole	34.23	37.25
CDX73039	Canola	vacuole	36.34	37.12
Solyc10g079610.1.1	Tomato	vacuole	41.44	37.1
Zm00001d020306_P001	Maize	endoplasmic reticulum, vacuole	38.14	37.03
Zm00001d029111_P001	Maize	vacuole	37.54	36.98
EER96671	Sorghum	endoplasmic reticulum, golgi	38.74	36.86
Zm00001d029108_P001	Maize	vacuole	34.83	36.59
TraesCS2A01G078000.1	Wheat	vacuole	37.54	36.44
TraesCS2B01G093000.1	Wheat	golgi, vacuole	37.54	36.44
TraesCS3B01G558800.1	Wheat	cytosol	22.82	36.36
EES01841	Sorghum	vacuole	37.84	36.31
EES01763	Sorghum	vacuole	37.54	36.23
Zm00001d012249_P001	Maize	vacuole	37.54	36.23
HORVU2Hr1G064060.1	Barley	mitochondrion, vacuole	27.63	36.22
TraesCS2D01G076000.1	Wheat	golgi, vacuole	37.24	36.15
KXG39404	Sorghum	golgi, vacuole	36.94	36.07
TraesCS2B01G092900.1	Wheat	golgi, vacuole	36.94	35.96
GSMUA_Achr5P05340_001	Banana	vacuole	38.74	35.93
HORVU2Hr1G012970.2	Barley	mitochondrion	37.54	35.71
Zm00001d012252_P001	Maize	vacuole	36.94	35.65
Zm00001d012366_P001	Maize	vacuole	36.94	35.65
Zm00001d012368_P001	Maize	golgi, vacuole	36.94	35.65
Zm00001d012371_P001	Maize	golgi, vacuole	36.94	35.65
Zm00001d012377_P001	Maize	vacuole	36.94	35.65
TraesCS2D01G076200.1	Wheat	vacuole	36.64	35.57
Zm00001d020308_P001	Maize	cytosol, plastid, vacuole	17.12	35.4
Bra003820.1-P	Field mustard	vacuole	34.23	35.29
TraesCS2D01G076400.1	Wheat	vacuole	36.34	35.28
TraesCSU01G189700.1	Wheat	vacuole	36.34	35.28
TraesCS5D01G202700.1	Wheat	vacuole	36.64	35.26
CDY66188	Canola	vacuole	34.53	35.06
TraesCS5B01G195300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	36.34	34.97
TraesCS7A01G138300.1	Wheat	cytosol	21.92	34.93
TraesCS7A01G138700.1	Wheat	cytosol	21.92	34.93
Zm00001d012375_P001	Maize	vacuole	35.14	34.93
TraesCS5B01G195400.1	Wheat	vacuole	38.14	34.89
TraesCS3B01G559100.1	Wheat	vacuole	36.04	34.78
TraesCS3D01G503900.1	Wheat	nucleus	32.43	34.73
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	36.04	34.68
TraesCS2D01G076300.1	Wheat	vacuole	36.04	34.68
TraesCS3A01G496700.1	Wheat	golgi, vacuole	35.74	34.49
CDX68204	Canola	vacuole	33.93	34.45
TraesCS5A01G188200.1	Wheat	vacuole	37.54	34.44
EES17427	Sorghum	golgi, vacuole	35.44	34.4
TraesCS3B01G338500.1	Wheat	extracellular, golgi, vacuole	35.44	34.4
CDY66189	Canola	vacuole	30.63	34.34
TraesCS5D01G202800.1	Wheat	golgi, vacuole	37.54	34.34
HORVU7Hr1G028550.2	Barley	plastid	18.32	34.27
Os01t0698200-00	Rice	mitochondrion	29.73	34.14
TraesCS7D01G076300.1	Wheat	vacuole	36.94	34.07
TraesCS2B01G281700.1	Wheat	golgi, vacuole	35.14	34.01
TraesCS7D01G076600.1	Wheat	cytosol	21.32	33.97
OQU79673	Sorghum	vacuole	34.83	33.92
TraesCS3D01G504000.1	Wheat	vacuole	35.14	33.91
TraesCSU01G240600.1	Wheat	cytosol	19.22	33.86
TraesCSU01G255900.1	Wheat	cytosol	19.22	33.86
HORVU3Hr1G065520.3	Barley	extracellular	32.73	33.85
OQU76676	Sorghum	extracellular, golgi, vacuole	35.14	33.81
TraesCS3A01G496900.1	Wheat	vacuole	35.44	33.71
TraesCS3B01G289800.1	Wheat	vacuole	33.93	33.63
HORVU5Hr1G093840.1	Barley	vacuole	34.23	33.63
TraesCS5B01G383000.1	Wheat	vacuole	34.23	33.63
TraesCS7D01G140500.1	Wheat	golgi, vacuole	34.83	33.62
OQU87434	Sorghum	golgi, vacuole	35.74	33.62
EER96672	Sorghum	vacuole	36.94	33.61
Zm00001d012363_P001	Maize	endoplasmic reticulum, extracellular	14.71	33.56
HORVU5Hr1G058940.2	Barley	vacuole	36.94	33.52
TraesCS5B01G382800.1	Wheat	vacuole	34.23	33.43
TraesCS7D01G076000.1	Wheat	vacuole	34.23	33.43
Os07t0543600-00	Rice	golgi, vacuole	35.14	33.43
Os08t0175000-00	Rice	golgi, mitochondrion, vacuole	35.74	33.43
TraesCS1A01G026500.1	Wheat	vacuole	34.53	33.33
TraesCS1A01G437900.1	Wheat	cytosol	18.62	33.33
TraesCS3A01G256600.1	Wheat	vacuole	33.63	33.33
TraesCS7B01G040900.1	Wheat	golgi, vacuole	34.83	33.33
TraesCSU01G223800.1	Wheat	vacuole	34.53	33.33
TraesCS7D01G076500.1	Wheat	cytosol	18.92	33.16
Os06t0623700-01	Rice	golgi, vacuole	34.83	33.14
Os08t0442200-01	Rice	extracellular	34.83	33.14
TraesCS7D01G139900.1	Wheat	vacuole	34.53	33.05
TraesCS7D01G075900.1	Wheat	vacuole	34.23	33.04
Zm00001d020307_P001	Maize	endoplasmic reticulum, vacuole	20.42	33.01
HORVU3Hr1G109810.1	Barley	golgi, vacuole	34.53	32.95
EES05895	Sorghum	golgi, vacuole	34.23	32.95
EES07680	Sorghum	golgi, vacuole	34.23	32.95
Solyc04g040090.2.1	Tomato	vacuole	37.24	32.89
TraesCS7A01G138800.1	Wheat	golgi, vacuole	30.03	32.79
TraesCS7B01G040400.1	Wheat	golgi, vacuole	34.23	32.76
TraesCSU01G104000.1	Wheat	golgi, vacuole	34.23	32.76
EER90208	Sorghum	vacuole	33.93	32.66
TraesCS7D01G140000.1	Wheat	golgi, vacuole	33.93	32.47
TraesCS5B01G330900.1	Wheat	extracellular, vacuole	18.02	32.43
OQU85880	Sorghum	golgi, vacuole	33.63	32.37
HORVU7Hr1G028580.1	Barley	golgi, vacuole	33.93	32.1
HORVU5Hr1G078340.1	Barley	golgi, vacuole	23.42	31.97
TraesCS5D01G389100.1	Wheat	plastid, vacuole	33.93	31.83
Solyc07g055750.2.1	Tomato	golgi, plastid, vacuole	38.44	31.76
EES05427	Sorghum	vacuole	32.73	31.69
TraesCS5A01G188300.1	Wheat	extracellular, plasma membrane, vacuole	35.74	31.57
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	33.63	31.46
TraesCS3D01G256900.1	Wheat	mitochondrion, plastid	33.63	31.37
Os09t0374900-00	Rice	cytosol, golgi, plastid, vacuole	35.74	31.15
TraesCS7D01G140600.1	Wheat	endoplasmic reticulum, plasma membrane	28.53	30.94
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	34.53	30.75
TraesCS2A01G260200.1	Wheat	mitochondrion, vacuole	31.83	30.64
Solyc06g073910.2.1	Tomato	cytosol, plasma membrane, vacuole	27.33	29.93
HORVU5Hr1G009400.2	Barley	cytosol, mitochondrion, plastid, vacuole	12.01	29.41
EES17425	Sorghum	extracellular	22.52	28.63
Solyc11g071800.1.1	Tomato	plastid, vacuole	33.33	28.39
Solyc03g053130.2.1	Tomato	extracellular	32.73	26.33
HORVU4Hr1G016850.1	Barley	cytosol	13.21	25.29
Solyc02g082900.2.1	Tomato	vacuole	23.12	20.75
Zm00001d012373_P001	Maize	vacuole	36.64	20.75
Bra015944.1-P	Field mustard	vacuole	36.04	20.1
Solyc05g025810.2.1	Tomato	plasma membrane, vacuole	21.32	20.06

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016020	GO:GO:0016787	GO:GO:0016788	GO:GO:0016844	InterPro:IPR011042
UniProt:K4DEQ3	PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF57	SUPFAM:SSF63829	EnsemblPlantsGene:Solyc12g039070.1
EnsemblPlants:Solyc12g039070.1.1	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TMHMM:TMhelix	UniParc:UPI000276A664	SEG:seg

Description

No Description!

Coordinates

chr12:+:45667802..45671515

Molecular Weight (calculated)

36766.6 Da

IEP (calculated)

9.773

GRAVY (calculated)

0.060

Length

333 amino acids

Sequence
(BLAST)

001: MASMKRPIIF IIFCFPIAYS QMVMKPLFPF KKLQLPSGTV GPEAIAFDLL GNGPYTSVAD GRVLKYQGPR IGFIDFATTS PLRTKEVCNG KNDPNLLITC
101: GRPLGLGFYY RSGDLYIADI NYGLLVVGRN GGPARQLVTG IDGKPFAFTN AVDIDQLNGV VYFTDSGPLF RATRNITLIL ESKDTTGRLF KYDIRTNKVT
201: LLLSGLAGPV GVAVSLDGSY VLVTELIANR IKRFWVRGTR ANTSQEFTNL NGYPDNIKRT ILGDYWVAVN IVNNQSMTPP KFSFAQKINV LGNVFVSLNL
301: STQYRNSISE VQEKFGRLYI GSLEEDFVGV YGV

Best Arabidopsis Sequence Match ( AT1G74000.1 )
(BLAST)

001: MMRSFVSLIS LLLLLSFSSS VLSTKKSSFQ KLPVPGNRTG PEAFAFDSTG KGFYTGVTGG KILKYLPKKG YVDFAQITNS SKSSLCDGAL GTTNVEKCGR
101: PAGIAFNTKT GDLYVADAAL GLHVIPRRGG LAKKIADSVG GKPFLFLDGL DVDPTTGVVY FTSFSSTFGP RDVLKAVATK DSTGKFFKYD PSKKVVTVLM
201: EGLSGSAGCA VSSDGSFVLV GQFTKSNIKR YWIKGSKAGT SEDFTNSVSN PDNIKRIGST GNFWVASVVN SATGPTNPSA VKVSSAGKVL QTIPLKDKFG
301: DTLVSEVNEY KGQLYIGALF GPFAGILKL

Arabidopsis Description

SSL11Protein STRICTOSIDINE SYNTHASE-LIKE 11 [Source:UniProtKB/Swiss-Prot;Acc:P92976]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.