Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 8
- plasma membrane 6
- golgi 5
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400007661 | Potato | vacuole | 95.23 | 94.72 |
Solyc10g079610.1.1 | Tomato | vacuole | 67.9 | 68.82 |
Solyc07g055740.1.1 | Tomato | vacuole | 59.68 | 64.1 |
KRH66809 | Soybean | endoplasmic reticulum | 60.21 | 61.19 |
KRG95135 | Soybean | endoplasmic reticulum | 59.95 | 60.92 |
Solyc07g055750.2.1 | Tomato | golgi, plastid, vacuole | 63.93 | 59.8 |
Solyc06g073910.2.1 | Tomato | cytosol, plasma membrane, vacuole | 37.14 | 46.05 |
Solyc11g071800.1.1 | Tomato | plastid, vacuole | 45.62 | 43.99 |
Solyc03g114560.2.1 | Tomato | extracellular | 36.07 | 41.59 |
Solyc03g114550.1.1 | Tomato | vacuole | 29.97 | 41.24 |
Solyc03g114540.1.1 | Tomato | vacuole | 35.01 | 39.29 |
Solyc03g114530.2.1 | Tomato | vacuole | 33.95 | 38.55 |
Solyc12g039070.1.1 | Tomato | nucleus | 32.89 | 37.24 |
Solyc03g053130.2.1 | Tomato | extracellular | 39.79 | 36.23 |
Solyc02g082900.2.1 | Tomato | vacuole | 25.2 | 25.61 |
Solyc05g025810.2.1 | Tomato | plasma membrane, vacuole | 23.61 | 25.14 |
Protein Annotations
Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016788 | GO:GO:0016844 | InterPro:IPR011042 |
UniProt:K4BRE7 | PFAM:PF03088 | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF22 | SUPFAM:SSF63829 | SignalP:SignalP-noTM |
EnsemblPlantsGene:Solyc04g040090.2 | EnsemblPlants:Solyc04g040090.2.1 | InterPro:Strictosidine_synth_cons-reg | InterPro:Strictosidine_synthase | UniParc:UPI00027661FF | : |
Description
No Description!
Coordinates
chr4:-:12116626..12121677
Molecular Weight (calculated)
41662.8 Da
IEP (calculated)
6.289
GRAVY (calculated)
-0.112
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MKALKFLMFS AITLALVSLI IASDSNSENN VFEPISISGS QDVLSKAEMI PLKLDAFGAE SVVFDPNGEG PYTGVADGRI IKWLQHNQTW VDFAVTSSQR
101: ENCTRASAPE MEHVCGRPLG LRFDHQTGDL YIADAYLGLQ VVGPNGGLAT PLVQHFEDQP LLFTNDLDID DHDHVIYFTD SSTIYQRRQF VNATASGDKT
201: GRLMKYDKST KQVTILLQGL SFANGVALSK DRTFVLVSET SACRITRYWL KGPNVGTHDT FAQLPGFPDN VRMNSRGEFW VALHAKASPL ARLITSNSWL
301: GKALLRKFNF QQMHNLLVGG KPHATAIKLS EDGGILEVLE DVEGKKLRFI SEVHEEENGK LWIGSVLMSS LGVYQLL
101: ENCTRASAPE MEHVCGRPLG LRFDHQTGDL YIADAYLGLQ VVGPNGGLAT PLVQHFEDQP LLFTNDLDID DHDHVIYFTD SSTIYQRRQF VNATASGDKT
201: GRLMKYDKST KQVTILLQGL SFANGVALSK DRTFVLVSET SACRITRYWL KGPNVGTHDT FAQLPGFPDN VRMNSRGEFW VALHAKASPL ARLITSNSWL
301: GKALLRKFNF QQMHNLLVGG KPHATAIKLS EDGGILEVLE DVEGKKLRFI SEVHEEENGK LWIGSVLMSS LGVYQLL
001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL
Arabidopsis Description
SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.