Factsheet for PGSC0003DMT400007661

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 8
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g040090.2.1	Tomato	vacuole	94.72	95.23
PGSC0003DMT400044531	Potato	vacuole	66.75	67.83
PGSC0003DMT400076777	Potato	vacuole	66.23	67.47
PGSC0003DMT400044684	Potato	vacuole	59.89	64.86
PGSC0003DMT400044685	Potato	extracellular	45.91	64.68
KRH66809	Soybean	endoplasmic reticulum	60.69	61.99
KRG95135	Soybean	endoplasmic reticulum	59.63	60.92
PGSC0003DMT400007732	Potato	vacuole	44.59	43.22
PGSC0003DMT400015199	Potato	vacuole	44.59	43.22
PGSC0003DMT400063282	Potato	extracellular, vacuole	17.15	41.94
PGSC0003DMT400048627	Potato	cytosol, golgi, mitochondrion, vacuole	36.15	40.18
PGSC0003DMT400063286	Potato	vacuole	34.83	39.52
PGSC0003DMT400056839	Potato	vacuole	32.45	39.42
PGSC0003DMT400063274	Potato	vacuole	34.3	38.69
PGSC0003DMT400063277	Potato	vacuole	33.77	38.55
PGSC0003DMT400030927	Potato	golgi, plasma membrane, vacuole	39.05	36.36
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	26.39	36.1
PGSC0003DMT400005990	Potato	cytosol	20.84	27.34
PGSC0003DMT400003995	Potato	golgi, vacuole	25.33	25.67

Protein Annotations

EnsemblPlants:PGSC0003DMT400007661	EnsemblPlantsGene:PGSC0003DMG400002959	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF22	PFAM:PF03088	PGSC:PGSC0003DMG400002959	SignalP:SignalP-noTM
SUPFAM:SSF63829	UniParc:UPI000296A1F9	UniProt:M0ZTC7	MapMan:50.4.3	:	:

Description

Strictosidine synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400002959]

Coordinates

chr4:-:24861613..24864585

Molecular Weight (calculated)

41840.0 Da

IEP (calculated)

5.775

GRAVY (calculated)

-0.087

Length

379 amino acids

Sequence
(BLAST)

001: MKALKFLMFS AITLALVSLI FASESDSDSE NNVFEPISIA GSQDVLSKAE MIPLKLGAFG AESVVFDPNG EGPYTGVADG RIIKWLQHNQ TWVDFAVTSS
101: QRENCSRTSA PEMEHVCGRP LGLRFDQETG DLYIADAYLG LQVVGPTGGL ATPLVQHFED HPLLFTNDLD INDHDHVIYF TDSSTIYQRR QFVNATASGD
201: KTGRLMKYDK STKQVTILLQ GLSFANGVAL SKDRTFVLVA ETSACRITRY WLKGPNVGTH DIFAQLPGFP DNIRMNSKGE FWVALHAKAS PLARLITSNS
301: WLGKALLRKF NFQQMHNLLV GGQPHATAIK LSEEGGILEV LEDVEGKKLR FISEVHEEED GKLWIGSVLM SSLGVYQLL

Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)

001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL

Arabidopsis Description

SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.