Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- vacuole 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g025810.2.1 | Tomato | plasma membrane, vacuole | 93.77 | 76.55 |
| VIT_11s0016g00880.t01 | Wine grape | plastid | 69.9 | 54.89 |
| VIT_11s0016g00860.t01 | Wine grape | golgi, vacuole | 66.44 | 52.6 |
| TraesCS2A01G170300.1 | Wheat | cytosol | 53.63 | 48.44 |
| KRH37504 | Soybean | vacuole | 59.86 | 48.32 |
| KRH37503 | Soybean | vacuole | 50.52 | 46.5 |
| GSMUA_Achr11P... | Banana | golgi, vacuole | 57.44 | 46.24 |
| VIT_11s0016g00870.t01 | Wine grape | plasma membrane, vacuole | 68.86 | 43.17 |
| TraesCS2B01G196600.1 | Wheat | golgi | 53.98 | 42.74 |
| TraesCS2D01G177900.2 | Wheat | golgi | 52.25 | 41.37 |
| KXG36678 | Sorghum | vacuole | 51.9 | 40.76 |
| TraesCS2B01G196500.1 | Wheat | golgi, vacuole | 51.56 | 40.6 |
| KXG36676 | Sorghum | vacuole | 50.17 | 40.28 |
| Zm00001d006853_P001 | Maize | vacuole | 50.17 | 39.51 |
| Os07t0614000-02 | Rice | vacuole | 49.83 | 39.24 |
| TraesCS2D01G177700.1 | Wheat | plasma membrane, vacuole | 49.83 | 39.24 |
| TraesCS2A01G170200.1 | Wheat | plasma membrane, vacuole | 49.83 | 36.36 |
| PGSC0003DMT400003995 | Potato | golgi, vacuole | 36.68 | 28.34 |
| PGSC0003DMT400015199 | Potato | vacuole | 31.83 | 23.53 |
| PGSC0003DMT400076777 | Potato | vacuole | 29.76 | 23.12 |
| PGSC0003DMT400007732 | Potato | vacuole | 31.14 | 23.02 |
| PGSC0003DMT400063286 | Potato | vacuole | 26.3 | 22.75 |
| PGSC0003DMT400044531 | Potato | vacuole | 29.07 | 22.52 |
| PGSC0003DMT400063274 | Potato | vacuole | 25.26 | 21.73 |
| PGSC0003DMT400044684 | Potato | vacuole | 26.3 | 21.71 |
| PGSC0003DMT400056839 | Potato | vacuole | 23.18 | 21.47 |
| PGSC0003DMT400048627 | Potato | cytosol, golgi, mitochondrion, vacuole | 25.26 | 21.41 |
| PGSC0003DMT400063277 | Potato | vacuole | 24.57 | 21.39 |
| PGSC0003DMT400001736 | Potato | cytosol, peroxisome, vacuole | 20.07 | 20.94 |
| PGSC0003DMT400030927 | Potato | golgi, plasma membrane, vacuole | 29.41 | 20.88 |
| PGSC0003DMT400007661 | Potato | vacuole | 27.34 | 20.84 |
| PGSC0003DMT400044685 | Potato | extracellular | 16.61 | 17.84 |
| PGSC0003DMT400063282 | Potato | extracellular, vacuole | 7.27 | 13.55 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400005990 | EnsemblPlantsGene:PGSC0003DMG400002328 | Gene3D:2.120.10.30 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016844 | InterPro:6-blade_b-propeller_TolB-like | InterPro:IPR011042 | InterPro:Strictosidine_synth_cons-reg |
| InterPro:Strictosidine_synthase | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF35 | PFAM:PF03088 | PGSC:PGSC0003DMG400002328 | SUPFAM:SSF63829 |
| UniParc:UPI000296D82F | UniProt:M0ZQN6 | MapMan:50.4.3 | : | : | : |
Description
Adipocyte plasma membrane-associated protein [Source:PGSC_GENE;Acc:PGSC0003DMG400002328]
Coordinates
chr5:-:25089505..25093037
Molecular Weight (calculated)
32151.8 Da
IEP (calculated)
6.947
GRAVY (calculated)
0.005
Length
289 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIVYTATRD GWIKRRHKNG TWQSWKYIGR DTLLGLKVSS AGHILVCDAQ EGLLKVTEDG VTVLASHVNG KKIRLADDVV EASDGSVYFS VASTKFGLHE
101: WFLDVLEAKP HGQLLKYSPS LNQISVILDN LAFANGVALS ADQDYLVVCE SWKFRCLKYW LKEEMKGQTE MFIDNLVGAP DNIKLAPDGS FWIALIQITA
201: PRLNFIHKSR AIEHLLATFP KLMKWVMGAY DKAMVVNVAA DGKITKGFDD PTGKVMSFVT SVLEYDDHLY LGSLNCDFIG KLPLTTSTD
101: WFLDVLEAKP HGQLLKYSPS LNQISVILDN LAFANGVALS ADQDYLVVCE SWKFRCLKYW LKEEMKGQTE MFIDNLVGAP DNIKLAPDGS FWIALIQITA
201: PRLNFIHKSR AIEHLLATFP KLMKWVMGAY DKAMVVNVAA DGKITKGFDD PTGKVMSFVT SVLEYDDHLY LGSLNCDFIG KLPLTTSTD
001: MPMFYSSRFL FFFTIVPLLV SIALYQLDTF DPAPVPSEAY ASSTTSIPPL ISDKYLTGAE FIGVGLLDKP EDIAYHQDSN LIYTGCIDGW VKRVSVHDSA
101: NDSVVEDWVN TGGRPLGIAF GVHGEVIVAD AYKGLLNISG DGKKTELLTD QAEGVKFKLT DVVAVADNGV LYFTDASYKY TLHQVKFDIL EGKPHGRLMS
201: FDPTTRVTRV LLKDLYFANG VSMSPDQTHL IFCETPMRRC SKYYINEERV EVFIQGLPGY PDNIRYDGDG HYWIAMGAST LWRLSMKYPF LRKITAIAAK
301: YGVELMFMKN AGVLQVDLDG NPIAYYHDQR LSHITTGIKI GNYLYCGNIL HSYIIRLDLL KYPAQKKKL
101: NDSVVEDWVN TGGRPLGIAF GVHGEVIVAD AYKGLLNISG DGKKTELLTD QAEGVKFKLT DVVAVADNGV LYFTDASYKY TLHQVKFDIL EGKPHGRLMS
201: FDPTTRVTRV LLKDLYFANG VSMSPDQTHL IFCETPMRRC SKYYINEERV EVFIQGLPGY PDNIRYDGDG HYWIAMGAST LWRLSMKYPF LRKITAIAAK
301: YGVELMFMKN AGVLQVDLDG NPIAYYHDQR LSHITTGIKI GNYLYCGNIL HSYIIRLDLL KYPAQKKKL
Arabidopsis Description
SSL5Protein STRICTOSIDINE SYNTHASE-LIKE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAZ7]
SUBAcon: [golgi,vacuole]
SUBAcon: [golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.