CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH37504	Soybean	vacuole	80.89	70.95
VIT_11s0016g00860.t01	Wine grape	golgi, vacuole	60.19	51.78
VIT_11s0016g00880.t01	Wine grape	plastid	59.55	50.82
PGSC0003DMT400005990	Potato	cytosol	46.5	50.52
Solyc05g025810.2.1	Tomato	plasma membrane, vacuole	52.87	46.89
GSMUA_Achr11P...	Banana	golgi, vacuole	46.5	40.67
TraesCS2A01G170300.1	Wheat	cytosol	39.81	39.06
VIT_11s0016g00870.t01	Wine grape	plasma membrane, vacuole	57.01	38.83
TraesCS2D01G177900.2	Wheat	golgi	42.68	36.71
TraesCS2B01G196600.1	Wheat	golgi	42.36	36.44
KXG36676	Sorghum	vacuole	41.08	35.83
TraesCS2B01G196500.1	Wheat	golgi, vacuole	41.4	35.42
TraesCS2D01G177700.1	Wheat	plasma membrane, vacuole	40.76	34.88
Zm00001d006853_P001	Maize	vacuole	40.76	34.88
KXG36678	Sorghum	vacuole	39.81	33.97
Os07t0614000-02	Rice	vacuole	39.49	33.79
TraesCS2A01G170200.1	Wheat	plasma membrane, vacuole	40.76	32.32
KRH07935	Soybean	endoplasmic reticulum	27.39	22.75
KRH69688	Soybean	golgi, vacuole	26.43	22.62
KRH63133	Soybean	peroxisome, vacuole	12.1	21.97
KRH66809	Soybean	endoplasmic reticulum	23.89	20.22
KRG95135	Soybean	endoplasmic reticulum	23.57	19.95
KRH22599	Soybean	vacuole	23.89	19.48
KRH69689	Soybean	plastid	23.57	18.69
KRH26734	Soybean	vacuole	20.7	17.81
KRH66810	Soybean	vacuole	21.34	17.54
KRH54773	Soybean	vacuole	18.79	17.51
KRH56180	Soybean	endoplasmic reticulum	24.52	17.46
KRH07462	Soybean	vacuole	18.79	17.0
KRH45407	Soybean	nucleus	18.79	16.91
KRH56734	Soybean	vacuole	18.15	16.67
KRH23218	Soybean	golgi, vacuole	20.7	15.85
KRH03206	Soybean	vacuole	16.88	15.77
KRH10120	Soybean	endoplasmic reticulum	20.38	15.61

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	UniProt:A0A0R0IEQ8	EMBL:ACUP02005457	EnsemblPlantsGene:GLYMA_09G070400
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016788	GO:GO:0016844	InterPro:IPR011042	EnsemblPlants:KRH37503	ProteinID:KRH37503
ProteinID:KRH37503.1	PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF35	SUPFAM:SSF63829	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	TMHMM:TMhelix	UniParc:UPI0006ED889E	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:+:7185690..7188915

Molecular Weight (calculated)

35304.6 Da

IEP (calculated)

5.671

GRAVY (calculated)

0.064

Length

314 amino acids

Sequence
(BLAST)

001: MASNLIRVSS SLVLVVLVAL TVQIFYFSPI DPVLLDIKPA SLTIDNKLRE SEDVCVDKEG TLYTATRDGW IKRLRRNKGN WENWKHMDSD TLIGITTAKE
101: VGIIVCDVTK GLFKVTEKDG FSVLISQLNG CQLSVLNTKF DMQNWYLDVL EASSHGQVLK YNPTSNETVI FLNNVVAFAN GVALSKDEDY LVACEIWKYR
201: CIRHWLKGAN KGITDVLIEN LPGAPDNINL APDGSFWIPL ILLTSKGLEF VHKYKTTKHL VDSFPRLIVV NVATDGKIIR EFDDADWKVI TFVTSALEFE
301: DHLYLGNLNC NFLG

Best Arabidopsis Sequence Match ( AT3G51420.1 )
(BLAST)

001: MVLFFSTRFL FFSIFFPCLI SITLYQLDSF EPASLPADSL ITSPTSIPPL LNDRFLTGAE FIGVGLLNNP EDIAYHKDSN LIYTGCVDGW VKRVSVHDSA
101: NDSIVEDWVN TGGRPLGIAF GLHGEVIVAD ANKGLLSISD GGKKTELLTD EADGVRFKLT DAVTVADNGV LYFTDASSKY DFYQFIFDFL EGKPHGRVMS
201: FDPTTRATRV LLKDLYFANG ISMSPDQTHF VFCETIMRRC SKYYISEERV EVFIQGLPGY PDNIRYDGDG HYWIALISEV TTSWKLSMKY LFLRKLIYMA
301: AKYGVELLSI KNAAVLQVDL DGNPIAMYHD HPFSHITSGV KIGNHLYFGS LLHSYITRLD LLKYPAQKKL

Arabidopsis Description

SSL4SSL4 [Source:UniProtKB/TrEMBL;Acc:A0A178VDG6]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.