Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- cytosol 1
- endoplasmic reticulum 4
- vacuole 3
- extracellular 2
- plasma membrane 2
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH23218 | Soybean | golgi, vacuole | 97.32 | 97.32 |
| VIT_05s0102g00880.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi | 78.54 | 79.31 |
| CDX71901 | Canola | extracellular, golgi, vacuole | 73.66 | 74.94 |
| CDY05993 | Canola | endoplasmic reticulum, golgi, vacuole | 73.17 | 74.44 |
| Bra007457.1-P | Field mustard | golgi, vacuole | 74.88 | 74.33 |
| Bra014536.1-P | Field mustard | vacuole | 74.88 | 74.15 |
| AT3G59530.3 | Thale cress | golgi, vacuole | 72.68 | 73.95 |
| CDX89027 | Canola | endoplasmic reticulum, vacuole | 72.44 | 73.51 |
| PGSC0003DMT400030927 | Potato | golgi, plasma membrane, vacuole | 70.0 | 70.52 |
| Solyc03g053130.2.1 | Tomato | extracellular | 70.24 | 69.57 |
| TraesCS4B01G215300.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 64.63 | 64.16 |
| TraesCS4D01G215800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 64.39 | 63.92 |
| TraesCS4A01G089000.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 64.39 | 63.92 |
| HORVU4Hr1G061230.2 | Barley | peroxisome, vacuole | 65.12 | 62.38 |
| Os03t0263600-01 | Rice | cytosol, golgi, mitochondrion, vacuole | 64.15 | 61.59 |
| Zm00001d047858_P001 | Maize | endoplasmic reticulum, golgi, mitochondrion, vacuole | 61.71 | 61.41 |
| EER92507 | Sorghum | cytosol, golgi, mitochondrion, vacuole | 61.71 | 61.41 |
| GSMUA_Achr11P... | Banana | golgi, vacuole | 52.2 | 55.73 |
| KRG95135 | Soybean | endoplasmic reticulum | 40.0 | 44.2 |
| KRH66809 | Soybean | endoplasmic reticulum | 39.51 | 43.67 |
| KRH22599 | Soybean | vacuole | 36.83 | 39.22 |
| KRH45407 | Soybean | nucleus | 33.17 | 38.97 |
| KRH07462 | Soybean | vacuole | 32.93 | 38.9 |
| KRH26734 | Soybean | vacuole | 34.39 | 38.63 |
| KRH56180 | Soybean | endoplasmic reticulum | 40.98 | 38.1 |
| KRH66810 | Soybean | vacuole | 32.2 | 34.55 |
| KRH54773 | Soybean | vacuole | 26.34 | 32.05 |
| KRH03206 | Soybean | vacuole | 26.1 | 31.85 |
| KRH56734 | Soybean | vacuole | 26.34 | 31.58 |
| KRH63133 | Soybean | peroxisome, vacuole | 11.71 | 27.75 |
| KRH37504 | Soybean | vacuole | 21.95 | 25.14 |
| KRH69688 | Soybean | golgi, vacuole | 22.2 | 24.8 |
| KRH07935 | Soybean | endoplasmic reticulum | 22.68 | 24.6 |
| KRH69689 | Soybean | plastid | 23.66 | 24.49 |
| KRH37503 | Soybean | vacuole | 15.61 | 20.38 |
Protein Annotations
| EntrezGene:100808153 | Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | EMBL:ACUP02009118 | EnsemblPlantsGene:GLYMA_15G029300 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0016788 | GO:GO:0016844 | UniProt:I1MD54 | InterPro:IPR011042 | EnsemblPlants:KRH10120 |
| ProteinID:KRH10120 | ProteinID:KRH10120.1 | PFAM:PF03088 | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF21 | SUPFAM:SSF63829 |
| InterPro:Strictosidine_synth_cons-reg | InterPro:Strictosidine_synthase | TMHMM:TMhelix | UniParc:UPI00023D187C | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr15:-:2366688..2369189
Molecular Weight (calculated)
46632.5 Da
IEP (calculated)
7.271
GRAVY (calculated)
-0.230
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKIKIKLLM KDETFLQHPF VLAVVLVLGL VMMDPFHLGP VAEHEFRPVK HSIAPYHQVM KNWPRDNMSR LALHGKSEFK NQVFGPESLE FDNMGRGPYT
101: GLADGRVVRW MGEQHGWETF AVVTSNWTEK LCFRGNDSTT EKQWKHEKTC GRPLGLRFDK ESGDLYIADA YYGLLVVGPN GGLATSLATH VEGKPILFAN
201: DLDIHKNGSI FFTDTSKRYN RVAHFFILLE GEATGRLLRY DPPTKTTHVV LDGLVFPNGV QFSKDHSFLL YTETTNCRLM KLWIEGPKSG TVELLADLPG
301: FPDNVRINEK GQFWVAIDCC RTPAQEVLSH NPWLRNIYFR LPIRMSLLAR AMGMKMYTVI SLLDDKGEVL EVLEDQQGQV MKLVSEVREE QGKLWIGTVA
401: HNHIATLSYP
101: GLADGRVVRW MGEQHGWETF AVVTSNWTEK LCFRGNDSTT EKQWKHEKTC GRPLGLRFDK ESGDLYIADA YYGLLVVGPN GGLATSLATH VEGKPILFAN
201: DLDIHKNGSI FFTDTSKRYN RVAHFFILLE GEATGRLLRY DPPTKTTHVV LDGLVFPNGV QFSKDHSFLL YTETTNCRLM KLWIEGPKSG TVELLADLPG
301: FPDNVRINEK GQFWVAIDCC RTPAQEVLSH NPWLRNIYFR LPIRMSLLAR AMGMKMYTVI SLLDDKGEVL EVLEDQQGQV MKLVSEVREE QGKLWIGTVA
401: HNHIATLSYP
001: MEKKGQHGTY ESMMTHHPIL CIIALSVLFI AIDPFHMSPI GGREFKPVKH EVAPYKEVMG SWPRDNLSRL GNHGKLEFVD QVFGPESLEF DSLGRGPYTG
101: LADGRVVRWM GEAIGWETFS VVTSKWSEEA CVRGVDSTTN KQWKHEKLCG RPLGLRFHKE TGNLYIADAY YGLLVVGPEG GIATPLATHV EGKPILFAND
201: LDIHRNGSIF FTDTSKRYDR ANHFFILLEG ESTGRLLRYD PPTKTTHIVL EGLAFPNGIQ LSKDQSFLLF TETTNCRLVK YWLEGPKMGE VEVVADLPGF
301: PDNVRINEEG QFWVAIDCCR TPAQEVLTNN PWIRSIYFRL PIPMKLLAKT MGMRMYTVIS RFDEEGKVLE VLEDRQGKVM KLWIGTVAHN HIATLPYPLT
401: MNQ
101: LADGRVVRWM GEAIGWETFS VVTSKWSEEA CVRGVDSTTN KQWKHEKLCG RPLGLRFHKE TGNLYIADAY YGLLVVGPEG GIATPLATHV EGKPILFAND
201: LDIHRNGSIF FTDTSKRYDR ANHFFILLEG ESTGRLLRYD PPTKTTHIVL EGLAFPNGIQ LSKDQSFLLF TETTNCRLVK YWLEGPKMGE VEVVADLPGF
301: PDNVRINEEG QFWVAIDCCR TPAQEVLTNN PWIRSIYFRL PIPMKLLAKT MGMRMYTVIS RFDEEGKVLE VLEDRQGKVM KLWIGTVAHN HIATLPYPLT
401: MNQ
Arabidopsis Description
SSL13Protein STRICTOSIDINE SYNTHASE-LIKE 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1B4]
SUBAcon: [golgi,extracellular,vacuole]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.