Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 8
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH26734 | Soybean | vacuole | 72.73 | 76.71 |
| VIT_06s0009g00850.t01 | Wine grape | cytosol | 59.74 | 65.53 |
| Solyc11g071800.1.1 | Tomato | plastid, vacuole | 62.08 | 61.13 |
| PGSC0003DMT400007732 | Potato | vacuole | 61.82 | 60.87 |
| PGSC0003DMT400015199 | Potato | vacuole | 61.82 | 60.87 |
| Solyc06g073910.2.1 | Tomato | cytosol, plasma membrane, vacuole | 47.27 | 59.87 |
| KRH56180 | Soybean | endoplasmic reticulum | 67.79 | 59.18 |
| AT1G08470.1 | Thale cress | endoplasmic reticulum, vacuole | 59.22 | 58.46 |
| Bra018623.1-P | Field mustard | cytosol | 53.25 | 58.4 |
| CDX95058 | Canola | vacuole | 56.1 | 57.75 |
| CDX93560 | Canola | vacuole | 58.44 | 57.25 |
| GSMUA_Achr3P30810_001 | Banana | endoplasmic reticulum, vacuole | 56.62 | 56.04 |
| EER90869 | Sorghum | vacuole | 55.84 | 54.02 |
| HORVU5Hr1G114720.1 | Barley | plastid | 25.97 | 52.63 |
| TraesCS5B01G395100.1 | Wheat | vacuole | 54.29 | 52.38 |
| TraesCS5D01G400000.1 | Wheat | golgi | 54.03 | 52.26 |
| TraesCS5A01G390200.1 | Wheat | golgi | 53.77 | 52.01 |
| GSMUA_Achr8P04740_001 | Banana | endoplasmic reticulum, golgi, vacuole | 55.84 | 51.81 |
| HORVU5Hr1G095260.1 | Barley | extracellular | 53.51 | 51.63 |
| HORVU5Hr1G114800.1 | Barley | extracellular | 28.31 | 50.7 |
| Os03t0750700-01 | Rice | plasma membrane | 51.43 | 49.62 |
| Zm00001d034032_P001 | Maize | plasma membrane | 58.7 | 41.93 |
| KRG95135 | Soybean | endoplasmic reticulum | 38.96 | 40.43 |
| KRH66809 | Soybean | endoplasmic reticulum | 38.18 | 39.62 |
| KRH10120 | Soybean | endoplasmic reticulum | 39.22 | 36.83 |
| KRH23218 | Soybean | golgi, vacuole | 38.7 | 36.34 |
| KRH45407 | Soybean | nucleus | 31.17 | 34.38 |
| KRH07462 | Soybean | vacuole | 30.91 | 34.29 |
| HORVU6Hr1G025030.1 | Barley | cytosol | 9.61 | 33.33 |
| KRH56734 | Soybean | vacuole | 28.05 | 31.58 |
| KRH66810 | Soybean | vacuole | 31.17 | 31.41 |
| KRH03206 | Soybean | vacuole | 27.01 | 30.95 |
| KRH54773 | Soybean | vacuole | 27.01 | 30.86 |
| KRH37504 | Soybean | vacuole | 24.42 | 26.26 |
| KRH63133 | Soybean | peroxisome, vacuole | 11.69 | 26.01 |
| KRH07935 | Soybean | endoplasmic reticulum | 24.42 | 24.87 |
| KRH69688 | Soybean | golgi, vacuole | 23.12 | 24.25 |
| KRH69689 | Soybean | plastid | 24.68 | 23.99 |
| KRH37503 | Soybean | vacuole | 19.48 | 23.89 |
Protein Annotations
| Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | EMBL:ACUP02008423 | EnsemblPlantsGene:GLYMA_13G311100 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0005774 | GO:GO:0005783 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0016788 | GO:GO:0016844 | InterPro:IPR011042 | UniProt:K7M2Y1 | EnsemblPlants:KRH22599 |
| ProteinID:KRH22599 | ProteinID:KRH22599.1 | PFAM:PF03088 | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF24 | SUPFAM:SSF63829 |
| SignalP:SignalP-noTM | InterPro:Strictosidine_synth_cons-reg | InterPro:Strictosidine_synthase | UniParc:UPI0002955AE6 | : | : |
Description
hypothetical protein
Coordinates
chr13:-:40644662..40647897
Molecular Weight (calculated)
42876.9 Da
IEP (calculated)
8.345
GRAVY (calculated)
-0.098
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MMLPRGFSIE FLLLALYCAL DPFGHSPIAG FPHFEVHKID MPAWSEVPTD RDKDNSLQKS EVLIVNQVQG PESIAFDPLG RGPYTGVADG RILFWNGQSE
101: LCNPKESASP MSYVETEHIC GRPLGLRFDK NTGDLYIADA YYGLMKVGPQ GGLATSLATE AEGVPLRFTN DVDIDTEGNL YFTDSSTNFQ RSLKHPHFAM
201: LNIYAFRMKG IVLPSVKNDE FHSVGTLVLS GEASGRVLKY NLATKETTVL MRNVQFPNGI SLSKDASLFV FSEGMNGRLR KYWLKGVKAG TSEILAILPG
301: FPDNVRVNGN GDFWVAIHCR RCVYSYLNAL YPKMRKVILK IPIPTRIQCM FHIGGRFHAV VVKYSPEGKL LRILEDSEGK VVRTV
101: LCNPKESASP MSYVETEHIC GRPLGLRFDK NTGDLYIADA YYGLMKVGPQ GGLATSLATE AEGVPLRFTN DVDIDTEGNL YFTDSSTNFQ RSLKHPHFAM
201: LNIYAFRMKG IVLPSVKNDE FHSVGTLVLS GEASGRVLKY NLATKETTVL MRNVQFPNGI SLSKDASLFV FSEGMNGRLR KYWLKGVKAG TSEILAILPG
301: FPDNVRVNGN GDFWVAIHCR RCVYSYLNAL YPKMRKVILK IPIPTRIQCM FHIGGRFHAV VVKYSPEGKL LRILEDSEGK VVRTV
001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP
Arabidopsis Description
SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.