Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- vacuole 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G095260.1 | Barley | extracellular | 100.0 | 47.62 |
| TraesCS5D01G400000.1 | Wheat | golgi | 99.47 | 47.49 |
| TraesCS5A01G390200.1 | Wheat | golgi | 98.95 | 47.24 |
| TraesCS5B01G395100.1 | Wheat | vacuole | 98.42 | 46.87 |
| EER90869 | Sorghum | vacuole | 91.58 | 43.72 |
| Os03t0750700-01 | Rice | plasma membrane | 90.0 | 42.86 |
| Solyc06g073910.2.1 | Tomato | cytosol, plasma membrane, vacuole | 66.32 | 41.45 |
| VIT_06s0009g00850.t01 | Wine grape | cytosol | 70.0 | 37.89 |
| GSMUA_Achr3P30810_001 | Banana | endoplasmic reticulum, vacuole | 73.68 | 35.99 |
| HORVU5Hr1G009400.2 | Barley | cytosol, mitochondrion, plastid, vacuole | 25.26 | 35.29 |
| Bra018623.1-P | Field mustard | cytosol | 61.58 | 33.33 |
| PGSC0003DMT400015199 | Potato | vacuole | 67.37 | 32.74 |
| Zm00001d034032_P001 | Maize | plasma membrane | 92.63 | 32.65 |
| Solyc11g071800.1.1 | Tomato | plastid, vacuole | 66.32 | 32.23 |
| PGSC0003DMT400007732 | Potato | vacuole | 66.32 | 32.23 |
| AT1G08470.1 | Thale cress | endoplasmic reticulum, vacuole | 65.26 | 31.79 |
| AT5G22020.2 | Thale cress | vacuole | 65.26 | 31.39 |
| Bra002383.1-P | Field mustard | vacuole | 63.68 | 30.63 |
| CDY16615 | Canola | endoplasmic reticulum, extracellular, vacuole | 63.68 | 30.63 |
| CDX93560 | Canola | vacuole | 62.11 | 30.03 |
| KRH56180 | Soybean | endoplasmic reticulum | 67.89 | 29.25 |
| CDX95058 | Canola | vacuole | 56.84 | 28.88 |
| CDX92388 | Canola | vacuole | 55.26 | 28.69 |
| KRH26734 | Soybean | vacuole | 51.05 | 26.58 |
| KRH22599 | Soybean | vacuole | 52.63 | 25.97 |
| HORVU6Hr1G026020.1 | Barley | cytosol | 30.0 | 22.98 |
| HORVU2Hr1G064060.1 | Barley | mitochondrion, vacuole | 29.47 | 22.05 |
| HORVU5Hr1G093840.1 | Barley | vacuole | 35.26 | 19.76 |
| HORVU5Hr1G043200.4 | Barley | vacuole | 36.84 | 18.72 |
| HORVU5Hr1G058910.2 | Barley | endoplasmic reticulum, extracellular, vacuole | 33.68 | 18.5 |
| HORVU4Hr1G061230.2 | Barley | peroxisome, vacuole | 41.05 | 18.22 |
| HORVU3Hr1G065520.3 | Barley | extracellular | 30.53 | 18.01 |
| HORVU2Hr1G012970.2 | Barley | mitochondrion | 32.63 | 17.71 |
| HORVU5Hr1G058940.2 | Barley | vacuole | 33.16 | 17.17 |
| HORVU7Hr1G028580.1 | Barley | golgi, vacuole | 30.53 | 16.48 |
| HORVU3Hr1G109810.1 | Barley | golgi, vacuole | 30.0 | 16.33 |
| HORVU1Hr1G052450.8 | Barley | extracellular, golgi, vacuole | 31.58 | 16.3 |
| HORVU5Hr1G091230.1 | Barley | golgi, mitochondrion, plastid, vacuole | 29.47 | 15.73 |
| HORVU2Hr1G013460.2 | Barley | golgi, mitochondrion, vacuole | 23.68 | 15.46 |
| HORVU3Hr1G074780.3 | Barley | cytosol, vacuole | 27.89 | 14.17 |
| HORVU7Hr1G028550.2 | Barley | plastid | 9.47 | 10.11 |
| HORVU5Hr1G078340.1 | Barley | golgi, vacuole | 10.53 | 8.2 |
| HORVU5Hr1G114800.1 | Barley | extracellular | 1.58 | 1.4 |
| HORVU7Hr1G019170.1 | Barley | cytosol | 0.53 | 0.58 |
| HORVU4Hr1G016850.1 | Barley | cytosol | 0.53 | 0.57 |
| HORVU6Hr1G025030.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G114720.1 | EnsemblPlantsGene:HORVU5Hr1G114720 | Gene3D:2.120.10.30 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016844 | InterPro:6-blade_b-propeller_TolB-like | InterPro:IPR011042 | InterPro:Strictosidine_synth_cons-reg |
| InterPro:Strictosidine_synthase | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF24 | PFAM:PF03088 | SUPFAM:SSF63829 | UniParc:UPI000B45F922 |
| UniProt:A0A287STM9 | MapMan:50.4.3 | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:644501422..644502387
Molecular Weight (calculated)
21480.0 Da
IEP (calculated)
9.555
GRAVY (calculated)
-0.142
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MQLVFSGDAS GRLLKYNPQT KETTVLHRNL QFPNGVSLSK DGSFFVFCEG SRGRLSRYWL KGEKAGTVDL FAILPGFPDN VRTNDKGEFW VAIHCRRSAY
101: ARLLSHRVQL RKFLLSLPIP AKYHYLMQIG GNLHALIIKY SPEGEVLDIL EDTKGQVVRA VSEVEEKDGK LWIGSVLMPF IAVFDYAKES
101: ARLLSHRVQL RKFLLSLPIP AKYHYLMQIG GNLHALIIKY SPEGEVLDIL EDTKGQVVRA VSEVEEKDGK LWIGSVLMPF IAVFDYAKES
001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP
Arabidopsis Description
SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.