CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92388	Canola	vacuole	89.87	96.99
AT5G22020.2	Thale cress	vacuole	90.13	90.13
CDX95058	Canola	vacuole	60.76	64.17
EER90869	Sorghum	vacuole	64.56	64.07
GSMUA_Achr3P30810_001	Banana	endoplasmic reticulum, vacuole	63.04	64.01
HORVU5Hr1G114720.1	Barley	plastid	30.63	63.68
CDX93560	Canola	vacuole	63.29	63.61
Os03t0750700-01	Rice	plasma membrane	63.04	62.41
TraesCS5A01G390200.1	Wheat	golgi	61.01	60.55
TraesCS5B01G395100.1	Wheat	vacuole	61.01	60.4
HORVU5Hr1G095260.1	Barley	extracellular	61.01	60.4
TraesCS5D01G400000.1	Wheat	golgi	60.76	60.3
GSMUA_Achr8P04740_001	Banana	endoplasmic reticulum, golgi, vacuole	62.28	59.28
HORVU5Hr1G114800.1	Barley	extracellular	30.89	56.74
CDX72079	Canola	vacuole	44.56	53.33
CDY06143	Canola	vacuole	47.34	48.7
Zm00001d034032_P001	Maize	plasma membrane	64.05	46.94
CDY70367	Canola	cytosol	31.9	45.99
CDY22517	Canola	vacuole	39.24	42.01
CDY23857	Canola	vacuole	38.73	41.46
CDX79943	Canola	vacuole	38.73	41.46
CDX89027	Canola	endoplasmic reticulum, vacuole	42.03	41.09
CDY05993	Canola	endoplasmic reticulum, golgi, vacuole	41.52	40.69
CDY30963	Canola	vacuole	38.73	40.69
CDX76030	Canola	endoplasmic reticulum, golgi, vacuole	38.48	40.43
CDY30962	Canola	vacuole	38.48	40.43
CDY22515	Canola	vacuole	35.7	40.4
CDX76033	Canola	vacuole	38.23	40.16
CDX67673	Canola	vacuole	37.47	40.0
CDY54042	Canola	vacuole	37.47	40.0
CDX79944	Canola	vacuole	37.97	40.0
CDX71901	Canola	extracellular, golgi, vacuole	40.76	39.95
CDY35420	Canola	vacuole	35.19	39.71
HORVU6Hr1G025030.1	Barley	cytosol	11.14	39.64
CDY23858	Canola	vacuole	37.47	39.57
CDX72080	Canola	endoplasmic reticulum, extracellular, golgi	36.46	39.02
CDY30959	Canola	extracellular, golgi, vacuole	36.46	38.92
CDX77108	Canola	vacuole	36.2	38.65
CDY30558	Canola	vacuole	36.2	38.34
CDY06144	Canola	vacuole	35.7	38.21
CDY39351	Canola	extracellular, plasma membrane, vacuole	33.42	37.82
CDY47397	Canola	vacuole	27.09	36.64
CDX73037	Canola	vacuole	28.61	34.45
CDX96505	Canola	vacuole	28.61	34.45
CDY47728	Canola	vacuole	28.1	33.95
CDY45861	Canola	vacuole	28.1	33.64
CDX96506	Canola	vacuole	27.09	32.92
CDX73038	Canola	vacuole	26.84	32.62
CDY47729	Canola	vacuole	26.58	32.31
CDX73039	Canola	vacuole	26.58	32.21
CDY45863	Canola	vacuole	26.08	31.69
CDX96507	Canola	vacuole	26.08	31.6
CDY66189	Canola	vacuole	23.54	31.31
CDX68204	Canola	vacuole	25.82	31.1
CDY66188	Canola	vacuole	25.57	30.79
CDY33280	Canola	golgi, vacuole	25.57	27.3
CDY16307	Canola	golgi, vacuole	25.32	27.03
CDX73720	Canola	golgi, vacuole	24.3	25.81
CDY16306	Canola	golgi, vacuole	23.29	25.77
CDY33279	Canola	golgi, vacuole	24.05	25.61
CDX78005	Canola	vacuole	24.05	22.95

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	GO:A0A078FQ87	UniProt:A0A078FQ87	EnsemblPlants:CDY16615
ProteinID:CDY16615	ProteinID:CDY16615.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0016844	EnsemblPlantsGene:GSBRNA2T00094438001	InterPro:IPR011042	PFAM:PF03088	PANTHER:PTHR10426
PANTHER:PTHR10426:SF24	SUPFAM:SSF63829	SignalP:SignalP-noTM	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	UniParc:UPI0004EE28D4
SEG:seg	:	:	:	:	:

Description

BnaC09g36580DBnaC09g36580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQ87]

Coordinates

chrLK032065:-:740329..742443

Molecular Weight (calculated)

44199.8 Da

IEP (calculated)

6.405

GRAVY (calculated)

-0.179

Length

395 amino acids

Sequence
(BLAST)

001: MALFISPPSS ALLFLTLSLA LYCSIDPFKH CAISDFPNFV AHEVVSPRPD QVPWERDSQN SLQGSKILFQ NQVQGPESVA FDPLGRGPYT GVADGRVLFW
101: NGENWTDFAY TSSNRTEICD PKPSALSYQR NEHICGRPLG LRFDKRTGDL YIADAYMGLL KVGPEGGLAT PLVTEAEGVP LGFTNDLDID DDGTVYFTDS
201: SINYQRRNFL QLVFSGDNTG RVLKYDPIAK KAVVLVSDVQ FPNGVSISKD GSFFVFCEGD IGSLRRYWLK GEKAGTSDVF AMLPGHPDNV RTNKDGEFWV
301: ALHCRRNYYS YIMARNPKLR MFILRLPITA RIHYMFQIGM KPHGLVVKYS PEGKLVKVLE DSEGKVVRSV SEVEEKDGKL WLGSVLMNFV AVYDL

Best Arabidopsis Sequence Match ( AT5G22020.2 )
(BLAST)

001: MALFLSPKTI TLLFFSLSLA LYCSIDPFHH CAISDFPNFV SHEVISPRPD EVPWERDSQN SLQKSKILFF NQIQGPESVA FDSLGRGPYT GVADGRVLFW
101: DGEKWIDFAY TSSNRSEICD PKPSALSYLR NEHICGRPLG LRFDKRTGDL YIADAYMGLL KVGPEGGLAT PLVTEAEGVP LGFTNDLDIA DDGTVYFTDS
201: SISYQRRNFL QLVFSGDNTG RVLKYDPVAK KAVVLVSNLQ FPNGVSISRD GSFFVFCEGD IGSLRRYWLK GEKAGTTDVF AYLPGHPDNV RTNQKGEFWV
301: ALHCRRNYYS YLMARYPKLR MFILRLPITA RTHYSFQIGL RPHGLVVKYS PEGKLMHVLE DSEGKVVRSV SEVEEKDGKL WMGSVLMNFV AVYDL

Arabidopsis Description

At5g22020 [Source:UniProtKB/TrEMBL;Acc:Q9C586]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.