Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77108 | Canola | vacuole | 98.39 | 99.19 |
| Bra034344.1-P | Field mustard | vacuole | 98.12 | 98.92 |
| CDY30959 | Canola | extracellular, golgi, vacuole | 86.33 | 87.03 |
| CDY06144 | Canola | vacuole | 85.25 | 86.18 |
| CDY54042 | Canola | vacuole | 85.25 | 85.95 |
| CDX67673 | Canola | vacuole | 85.25 | 85.95 |
| AT3G57020.1 | Thale cress | vacuole | 85.25 | 85.95 |
| CDY39351 | Canola | extracellular, plasma membrane, vacuole | 79.09 | 84.53 |
| CDX72080 | Canola | endoplasmic reticulum, extracellular, golgi | 83.38 | 84.28 |
| CDX76033 | Canola | vacuole | 68.1 | 67.55 |
| CDY30962 | Canola | vacuole | 68.1 | 67.55 |
| CDX76030 | Canola | endoplasmic reticulum, golgi, vacuole | 67.83 | 67.29 |
| CDY70367 | Canola | cytosol | 49.33 | 67.15 |
| CDY30963 | Canola | vacuole | 67.56 | 67.02 |
| CDY22517 | Canola | vacuole | 65.42 | 66.12 |
| CDX79943 | Canola | vacuole | 64.08 | 64.77 |
| CDY23857 | Canola | vacuole | 63.81 | 64.5 |
| CDY47397 | Canola | vacuole | 47.19 | 60.27 |
| CDX72079 | Canola | vacuole | 38.34 | 43.33 |
| KRH66809 | Soybean | endoplasmic reticulum | 42.09 | 42.32 |
| KRG95135 | Soybean | endoplasmic reticulum | 41.55 | 41.78 |
| CDY06143 | Canola | vacuole | 41.29 | 40.1 |
| CDX95058 | Canola | vacuole | 37.8 | 37.7 |
| CDX93560 | Canola | vacuole | 39.14 | 37.15 |
| CDX92388 | Canola | vacuole | 36.19 | 36.89 |
| CDY16615 | Canola | endoplasmic reticulum, extracellular, vacuole | 38.34 | 36.2 |
| CDY22515 | Canola | vacuole | 32.98 | 35.24 |
| CDY35420 | Canola | vacuole | 32.44 | 34.57 |
| CDX73037 | Canola | vacuole | 30.03 | 34.15 |
| CDX79944 | Canola | vacuole | 34.32 | 34.13 |
| CDY23858 | Canola | vacuole | 34.05 | 33.96 |
| CDY47728 | Canola | vacuole | 28.95 | 33.03 |
| CDX96505 | Canola | vacuole | 28.95 | 32.93 |
| CDY45861 | Canola | vacuole | 27.61 | 31.21 |
| CDX96507 | Canola | vacuole | 27.08 | 30.98 |
| CDX73039 | Canola | vacuole | 27.08 | 30.98 |
| CDX89027 | Canola | endoplasmic reticulum, vacuole | 33.51 | 30.94 |
| CDY05993 | Canola | endoplasmic reticulum, golgi, vacuole | 32.98 | 30.52 |
| CDX71901 | Canola | extracellular, golgi, vacuole | 32.71 | 30.27 |
| CDX68204 | Canola | vacuole | 26.27 | 29.88 |
| CDY45863 | Canola | vacuole | 26.01 | 29.85 |
| CDY47729 | Canola | vacuole | 26.01 | 29.85 |
| CDY66189 | Canola | vacuole | 23.59 | 29.63 |
| CDY66188 | Canola | vacuole | 25.47 | 28.96 |
| CDX96506 | Canola | vacuole | 25.2 | 28.92 |
| CDX73038 | Canola | vacuole | 24.93 | 28.62 |
| CDX73720 | Canola | golgi, vacuole | 21.72 | 21.77 |
| CDY33279 | Canola | golgi, vacuole | 20.91 | 21.02 |
| CDY16307 | Canola | golgi, vacuole | 20.64 | 20.81 |
| CDY16306 | Canola | golgi, vacuole | 19.84 | 20.73 |
| CDY33280 | Canola | golgi, vacuole | 20.38 | 20.54 |
| CDX78005 | Canola | vacuole | 21.45 | 19.32 |
Protein Annotations
| Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | GO:A0A078H1A7 | UniProt:A0A078H1A7 | EnsemblPlants:CDY30558 |
| ProteinID:CDY30558 | ProteinID:CDY30558.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016844 | EnsemblPlantsGene:GSBRNA2T00045290001 |
| InterPro:IPR011042 | PFAM:PF03088 | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF24 | SUPFAM:SSF63829 | InterPro:Strictosidine_synth_cons-reg |
| InterPro:Strictosidine_synthase | TMHMM:TMhelix | UniParc:UPI0004EF3A49 | SEG:seg | : | : |
Description
BnaA04g15750DBnaA04g15750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1A7]
Coordinates
chrLK032254:-:409847..416171
Molecular Weight (calculated)
41529.0 Da
IEP (calculated)
7.166
GRAVY (calculated)
-0.228
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MPISQKIPTW AAVPTVFAIL AVVSYQTLFA PDNLEGTKNV LPMAKTIPIP VDGPESIEFD PQGEGPYAAV VDGRILKWRG DALGWVEFAH TSPHRGNCSS
101: REVVPTCGRP LGLSFEKKTG DLYICDGYLG VMKVGPQGGL AELVVDQAEG RKVMFANQMD IDEEEDIEHV FYFNDSSDKY HFREVFFVAA NGERSGRVIR
201: YDKKTKEAKV VMDNLRCNNG LALNKDRSFL ISCESATGLV HRYWIKGPKA GTRDIFAKVP GYPDNIRLTP SGDFWIGIHS KKSPAGRLIV GNKWLGKLVE
301: KTVKLELLIA VMNGFKPHGI AVKISGETGE ILEILEDKEG KTMKYVSEAY EREDGKIWFG SVFWPAVWVL DRK
101: REVVPTCGRP LGLSFEKKTG DLYICDGYLG VMKVGPQGGL AELVVDQAEG RKVMFANQMD IDEEEDIEHV FYFNDSSDKY HFREVFFVAA NGERSGRVIR
201: YDKKTKEAKV VMDNLRCNNG LALNKDRSFL ISCESATGLV HRYWIKGPKA GTRDIFAKVP GYPDNIRLTP SGDFWIGIHS KKSPAGRLIV GNKWLGKLVE
301: KTVKLELLIA VMNGFKPHGI AVKISGETGE ILEILEDKEG KTMKYVSEAY EREDGKIWFG SVFWPAVWVL DRK
001: MPINQKIPTW FAVPAVFAVL SVISYQTLIV PENLEGAKNV LTMAKTIPIP VAGPESIEFD PKGEGPYAAV VDGRILKWRG DDLGWVDFAY TSPHRGNCSK
101: TEVVPTCGRP LGLTFEKKTG DLYICDGYLG LMKVGPEGGL AELIVDEAEG RKVMFANQGD IDEEEDVFYF NDSSDKYHFR DVFFVAVSGE RSGRVIRYDK
201: KTKEAKVIMD NLVCNNGLAL NKDRSFLITC ESGTSLVHRY WIKGPKAGTR DIFAKVPGYP DNIRLTSTGD FWIGLHCKKN LIGRLIVKYK WLGKLVEKTM
301: KLEYVIAFIN GFKPHGVAVK ISGETGEVLE LLEDKEGKTM KYVSEAYERD DGKLWFGSVY WPAVWVLDRK
101: TEVVPTCGRP LGLTFEKKTG DLYICDGYLG LMKVGPEGGL AELIVDEAEG RKVMFANQGD IDEEEDVFYF NDSSDKYHFR DVFFVAVSGE RSGRVIRYDK
201: KTKEAKVIMD NLVCNNGLAL NKDRSFLITC ESGTSLVHRY WIKGPKAGTR DIFAKVPGYP DNIRLTSTGD FWIGLHCKKN LIGRLIVKYK WLGKLVEKTM
301: KLEYVIAFIN GFKPHGVAVK ISGETGEVLE LLEDKEGKTM KYVSEAYERD DGKLWFGSVY WPAVWVLDRK
Arabidopsis Description
SSL9Protein STRICTOSIDINE SYNTHASE-LIKE 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J6]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.