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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002383.1-P Field mustard vacuole 98.09 90.89
CDY16615 Canola endoplasmic reticulum, extracellular, vacuole 96.99 89.87
AT5G22020.2 Thale cress vacuole 90.16 83.54
CDX95058 Canola vacuole 63.11 61.76
GSMUA_Achr3P30810_001 Banana endoplasmic reticulum, vacuole 63.93 60.15
EER90869 Sorghum vacuole 65.3 60.05
CDX93560 Canola vacuole 63.66 59.29
Os03t0750700-01 Rice plasma membrane 63.39 58.15
GSMUA_Achr8P04740_001 Banana endoplasmic reticulum, golgi, vacuole 65.03 57.35
HORVU5Hr1G114800.1 Barley extracellular 33.61 57.21
TraesCS5A01G390200.1 Wheat golgi 61.75 56.78
HORVU5Hr1G095260.1 Barley extracellular 61.75 56.64
TraesCS5B01G395100.1 Wheat vacuole 61.75 56.64
TraesCS5D01G400000.1 Wheat golgi 61.48 56.53
HORVU5Hr1G114720.1 Barley plastid 28.69 55.26
CDX72079 Canola vacuole 46.72 51.82
CDY06143 Canola vacuole 47.81 45.57
Zm00001d034032_P001 Maize plasma membrane 65.03 44.16
CDY70367 Canola cytosol 31.97 42.7
HORVU6Hr1G025030.1 Barley cytosol 12.57 41.44
CDX89027 Canola endoplasmic reticulum, vacuole 44.26 40.1
CDY22515 Canola vacuole 37.98 39.83
CDY05993 Canola endoplasmic reticulum, golgi, vacuole 43.72 39.7
CDY22517 Canola vacuole 39.89 39.57
CDY35420 Canola vacuole 37.43 39.14
CDX79943 Canola vacuole 39.34 39.02
CDY23857 Canola vacuole 39.34 39.02
CDX71901 Canola extracellular, golgi, vacuole 42.9 38.96
CDX67673 Canola vacuole 38.52 38.11
CDY54042 Canola vacuole 38.52 38.11
CDY30963 Canola vacuole 39.07 38.03
CDX76030 Canola endoplasmic reticulum, golgi, vacuole 38.8 37.77
CDX79944 Canola vacuole 38.52 37.6
CDY30962 Canola vacuole 38.52 37.5
CDX76033 Canola vacuole 38.52 37.5
CDX72080 Canola endoplasmic reticulum, extracellular, golgi 37.7 37.4
CDY23858 Canola vacuole 37.98 37.17
CDY30959 Canola extracellular, golgi, vacuole 37.16 36.76
CDY06144 Canola vacuole 36.89 36.59
CDX77108 Canola vacuole 36.89 36.49
CDY30558 Canola vacuole 36.89 36.19
CDY47397 Canola vacuole 28.69 35.96
CDY39351 Canola extracellular, plasma membrane, vacuole 33.88 35.53
CDX96505 Canola vacuole 30.33 33.84
CDX73037 Canola vacuole 30.33 33.84
CDY47728 Canola vacuole 29.51 33.03
CDY45861 Canola vacuole 29.23 32.42
CDX73038 Canola vacuole 28.42 32.0
CDX96506 Canola vacuole 28.42 32.0
CDY47729 Canola vacuole 27.87 31.38
CDX73039 Canola vacuole 27.87 31.29
CDY45863 Canola vacuole 27.32 30.77
CDX96507 Canola vacuole 27.32 30.67
CDY66189 Canola vacuole 24.86 30.64
CDX68204 Canola vacuole 27.32 30.49
CDY66188 Canola vacuole 27.05 30.18
CDY16307 Canola golgi, vacuole 26.78 26.49
CDY33280 Canola golgi, vacuole 26.78 26.49
CDX73720 Canola golgi, vacuole 25.68 25.27
CDY16306 Canola golgi, vacuole 24.32 24.93
CDY33279 Canola golgi, vacuole 25.14 24.8
CDX78005 Canola vacuole 25.41 22.46
Protein Annotations
Gene3D:2.120.10.30MapMan:50.4.3InterPro:6-blade_b-propeller_TolB-likeGO:A0A078DYM4EnsemblPlants:CDX92388ProteinID:CDX92388
ProteinID:CDX92388.1GO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0016844EnsemblPlantsGene:GSBRNA2T00154146001InterPro:IPR011042PFAM:PF03088PANTHER:PTHR10426PANTHER:PTHR10426:SF24
SUPFAM:SSF63829SignalP:SignalP-noTMInterPro:Strictosidine_synth_cons-regInterPro:Strictosidine_synthaseUniParc:UPI0004EF067ESEG:seg
Description
BnaA10g14270D
Coordinates
chrLK031872:+:348919..350674
Molecular Weight (calculated)
40786.4 Da
IEP (calculated)
5.265
GRAVY (calculated)
-0.193
Length
366 amino acids
Sequence
(BLAST)
001: MALFFSPLTS ALLFLTLSLA LYCSIDPFHH CAISDFPNFV AHEVVSPRPD QVPWERDSQN SLQGSKILFQ DQVQGPESVA FDPLGRGPYT GVADGRVLFW
101: NGENWTNFAY TSSKRTEICD PKPSALSYLR NEHICGRPLG LRFDKRTGDL YIADAYMGLL KVGPEGGLAT PLVTEAEGVP LGFTNDLDID DDGTVYFTDS
201: SISYQRRNFL QLVFSGDNTG RVLKYDPIAK KAAVLVSDVQ FPNGVSISKD GSFFVFCEGD IGSLRRYWLK GEKAGTSDVF AMLPGHPDNV RTNKDGEFWV
301: ALHCRRNYYS YIMARNPKLR IPEGKLVKVL EDSEGKVVRS VSEVEEKDGK LWLGSVLMNF VAVYDL
Best Arabidopsis Sequence Match ( AT5G22020.2 )
(BLAST)
001: MALFLSPKTI TLLFFSLSLA LYCSIDPFHH CAISDFPNFV SHEVISPRPD EVPWERDSQN SLQKSKILFF NQIQGPESVA FDSLGRGPYT GVADGRVLFW
101: DGEKWIDFAY TSSNRSEICD PKPSALSYLR NEHICGRPLG LRFDKRTGDL YIADAYMGLL KVGPEGGLAT PLVTEAEGVP LGFTNDLDIA DDGTVYFTDS
201: SISYQRRNFL QLVFSGDNTG RVLKYDPVAK KAVVLVSNLQ FPNGVSISRD GSFFVFCEGD IGSLRRYWLK GEKAGTTDVF AYLPGHPDNV RTNQKGEFWV
301: ALHCRRNYYS YLMARYPKLR MFILRLPITA RTHYSFQIGL RPHGLVVKYS PEGKLMHVLE DSEGKVVRSV SEVEEKDGKL WMGSVLMNFV AVYDL
Arabidopsis Description
At5g22020 [Source:UniProtKB/TrEMBL;Acc:Q9C586]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.