Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30558 | Canola | vacuole | 99.19 | 98.39 |
| Bra034344.1-P | Field mustard | vacuole | 98.11 | 98.11 |
| CDY30959 | Canola | extracellular, golgi, vacuole | 86.22 | 86.22 |
| CDY06144 | Canola | vacuole | 85.95 | 86.18 |
| CDY54042 | Canola | vacuole | 85.14 | 85.14 |
| AT3G57020.1 | Thale cress | vacuole | 85.14 | 85.14 |
| CDX67673 | Canola | vacuole | 85.14 | 85.14 |
| CDX72080 | Canola | endoplasmic reticulum, extracellular, golgi | 84.05 | 84.28 |
| CDY39351 | Canola | extracellular, plasma membrane, vacuole | 79.19 | 83.95 |
| CDX76033 | Canola | vacuole | 68.92 | 67.82 |
| CDY30963 | Canola | vacuole | 68.38 | 67.29 |
| CDY30962 | Canola | vacuole | 68.38 | 67.29 |
| CDY70367 | Canola | cytosol | 49.73 | 67.15 |
| CDX76030 | Canola | endoplasmic reticulum, golgi, vacuole | 68.11 | 67.02 |
| CDY22517 | Canola | vacuole | 65.95 | 66.12 |
| CDX79943 | Canola | vacuole | 63.78 | 63.96 |
| CDY23857 | Canola | vacuole | 63.51 | 63.69 |
| CDY47397 | Canola | vacuole | 47.3 | 59.93 |
| CDX72079 | Canola | vacuole | 38.65 | 43.33 |
| KRH66809 | Soybean | endoplasmic reticulum | 42.16 | 42.05 |
| KRG95135 | Soybean | endoplasmic reticulum | 41.62 | 41.51 |
| CDY06143 | Canola | vacuole | 41.62 | 40.1 |
| CDX95058 | Canola | vacuole | 38.11 | 37.7 |
| CDX93560 | Canola | vacuole | 39.46 | 37.15 |
| CDX92388 | Canola | vacuole | 36.49 | 36.89 |
| CDY16615 | Canola | endoplasmic reticulum, extracellular, vacuole | 38.65 | 36.2 |
| CDY22515 | Canola | vacuole | 33.51 | 35.53 |
| CDY35420 | Canola | vacuole | 32.97 | 34.86 |
| CDX79944 | Canola | vacuole | 34.86 | 34.4 |
| CDY23858 | Canola | vacuole | 34.59 | 34.22 |
| CDX73037 | Canola | vacuole | 30.0 | 33.84 |
| CDY47728 | Canola | vacuole | 28.92 | 32.72 |
| CDX96505 | Canola | vacuole | 28.92 | 32.62 |
| CDY45861 | Canola | vacuole | 27.57 | 30.91 |
| CDX89027 | Canola | endoplasmic reticulum, vacuole | 33.51 | 30.69 |
| CDX96507 | Canola | vacuole | 27.03 | 30.67 |
| CDX73039 | Canola | vacuole | 27.03 | 30.67 |
| CDY05993 | Canola | endoplasmic reticulum, golgi, vacuole | 32.97 | 30.27 |
| CDX71901 | Canola | extracellular, golgi, vacuole | 32.7 | 30.02 |
| CDX68204 | Canola | vacuole | 26.22 | 29.57 |
| CDY45863 | Canola | vacuole | 25.95 | 29.54 |
| CDY47729 | Canola | vacuole | 25.95 | 29.54 |
| CDY66189 | Canola | vacuole | 23.51 | 29.29 |
| CDY66188 | Canola | vacuole | 25.41 | 28.66 |
| CDX96506 | Canola | vacuole | 25.14 | 28.62 |
| CDX73038 | Canola | vacuole | 24.86 | 28.31 |
| CDX73720 | Canola | golgi, vacuole | 21.89 | 21.77 |
| CDY33279 | Canola | golgi, vacuole | 21.08 | 21.02 |
| CDY16307 | Canola | golgi, vacuole | 20.81 | 20.81 |
| CDY16306 | Canola | golgi, vacuole | 20.0 | 20.73 |
| CDY33280 | Canola | golgi, vacuole | 20.54 | 20.54 |
| CDX78005 | Canola | vacuole | 21.62 | 19.32 |
Protein Annotations
| Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | GO:A0A078CPX1 | EnsemblPlants:CDX77108 | ProteinID:CDX77108 |
| ProteinID:CDX77108.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0016844 | EnsemblPlantsGene:GSBRNA2T00127701001 | InterPro:IPR011042 | PFAM:PF03088 | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF24 |
| SUPFAM:SSF63829 | InterPro:Strictosidine_synth_cons-reg | InterPro:Strictosidine_synthase | TMHMM:TMhelix | UniParc:UPI0004EEB6E6 | SEG:seg |
Description
BnaC04g39030D
Coordinates
chrLK031809:+:1178870..1181021
Molecular Weight (calculated)
41150.5 Da
IEP (calculated)
7.496
GRAVY (calculated)
-0.249
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MPISQKIPTW AAAPTVFAIL AVVSYQTLFA PDNLEGTKNI LPMAKTIPIP VDGPESIEFD PQGEGPYAAV VDGRILKWRG DALGWVEFAH TSPHRGNCSS
101: REVVPTCGRP LGLSFEKKTG DLYICDGYQG VMKVGPQGGL AELVVDQAEG RKVMFANQMD IDEEEDVFYF NDSSDKYHFR EVFFVAANGE RSGRVIRYDK
201: KTKEAKVVMD NLRCNNGLAL NKDRSFLISC ESATGLVHRY WIKGPKAGTR DIFAKVPGYP DNIRLTPSGD FWIGIHSKKS PAGRLIVGNK WLGKLVEKTV
301: KLELLIAVMN GFKPHGIAVK ISGETGEILE ILEDKEGKTM KYVSEAYERE DGKIWFGSVF WPAVWVLDRK
101: REVVPTCGRP LGLSFEKKTG DLYICDGYQG VMKVGPQGGL AELVVDQAEG RKVMFANQMD IDEEEDVFYF NDSSDKYHFR EVFFVAANGE RSGRVIRYDK
201: KTKEAKVVMD NLRCNNGLAL NKDRSFLISC ESATGLVHRY WIKGPKAGTR DIFAKVPGYP DNIRLTPSGD FWIGIHSKKS PAGRLIVGNK WLGKLVEKTV
301: KLELLIAVMN GFKPHGIAVK ISGETGEILE ILEDKEGKTM KYVSEAYERE DGKIWFGSVF WPAVWVLDRK
001: MPINQKIPTW FAVPAVFAVL SVISYQTLIV PENLEGAKNV LTMAKTIPIP VAGPESIEFD PKGEGPYAAV VDGRILKWRG DDLGWVDFAY TSPHRGNCSK
101: TEVVPTCGRP LGLTFEKKTG DLYICDGYLG LMKVGPEGGL AELIVDEAEG RKVMFANQGD IDEEEDVFYF NDSSDKYHFR DVFFVAVSGE RSGRVIRYDK
201: KTKEAKVIMD NLVCNNGLAL NKDRSFLITC ESGTSLVHRY WIKGPKAGTR DIFAKVPGYP DNIRLTSTGD FWIGLHCKKN LIGRLIVKYK WLGKLVEKTM
301: KLEYVIAFIN GFKPHGVAVK ISGETGEVLE LLEDKEGKTM KYVSEAYERD DGKLWFGSVY WPAVWVLDRK
101: TEVVPTCGRP LGLTFEKKTG DLYICDGYLG LMKVGPEGGL AELIVDEAEG RKVMFANQGD IDEEEDVFYF NDSSDKYHFR DVFFVAVSGE RSGRVIRYDK
201: KTKEAKVIMD NLVCNNGLAL NKDRSFLITC ESGTSLVHRY WIKGPKAGTR DIFAKVPGYP DNIRLTSTGD FWIGLHCKKN LIGRLIVKYK WLGKLVEKTM
301: KLEYVIAFIN GFKPHGVAVK ISGETGEVLE LLEDKEGKTM KYVSEAYERD DGKLWFGSVY WPAVWVLDRK
Arabidopsis Description
SSL9Protein STRICTOSIDINE SYNTHASE-LIKE 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1J6]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.