Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036798.1-P | Field mustard | vacuole | 98.79 | 98.79 |
| CDX73720 | Canola | golgi, vacuole | 81.64 | 90.86 |
| CDY33279 | Canola | golgi, vacuole | 69.32 | 77.36 |
| CDY16307 | Canola | golgi, vacuole | 69.08 | 77.3 |
| CDY33280 | Canola | golgi, vacuole | 68.6 | 76.76 |
| CDY16306 | Canola | golgi, vacuole | 65.7 | 76.19 |
| AT3G51430.1 | Thale cress | golgi, vacuole | 67.87 | 75.74 |
| AT3G51440.1 | Thale cress | golgi, vacuole | 67.15 | 74.93 |
| AT3G51450.1 | Thale cress | vacuole | 66.43 | 74.12 |
| AT3G51420.1 | Thale cress | golgi, vacuole | 64.73 | 72.43 |
| VIT_04s0210g00060.t01 | Wine grape | cytosol, mitochondrion | 34.06 | 52.42 |
| PGSC0003DMT400003995 | Potato | golgi, vacuole | 46.86 | 51.87 |
| Solyc02g082900.2.1 | Tomato | vacuole | 45.41 | 50.67 |
| Os10t0543500-01 | Rice | plasma membrane | 30.92 | 50.2 |
| VIT_04s0210g00120.t01 | Wine grape | vacuole | 44.93 | 49.08 |
| VIT_04s0210g00080.t01 | Wine grape | vacuole | 44.69 | 48.81 |
| VIT_04s0210g00090.t01 | Wine grape | mitochondrion, vacuole | 22.71 | 47.96 |
| KRH69688 | Soybean | golgi, vacuole | 42.51 | 47.96 |
| VIT_04s0210g00130.t01 | Wine grape | plasma membrane, vacuole | 32.85 | 47.55 |
| VIT_04s0210g00050.t01 | Wine grape | plastid | 47.58 | 47.24 |
| VIT_04s0210g00100.t01 | Wine grape | cytosol | 19.81 | 46.86 |
| KRH07935 | Soybean | endoplasmic reticulum | 42.03 | 46.03 |
| TraesCS1A01G203800.1 | Wheat | cytosol, plastid, vacuole | 26.57 | 45.08 |
| HORVU1Hr1G052450.8 | Barley | extracellular, golgi, vacuole | 39.86 | 44.84 |
| TraesCS1B01G217600.1 | Wheat | extracellular, golgi, vacuole | 39.61 | 44.69 |
| TraesCS1D01G207200.2 | Wheat | extracellular, golgi, vacuole | 39.13 | 44.14 |
| GSMUA_AchrUn_... | Banana | plastid | 26.57 | 44.0 |
| KRH69689 | Soybean | plastid | 38.41 | 40.15 |
| OQU92210 | Sorghum | golgi, plastid, vacuole | 40.34 | 37.7 |
| VIT_04s0210g00040.t01 | Wine grape | cytosol, peroxisome, vacuole | 32.13 | 35.47 |
| CDX72079 | Canola | vacuole | 20.29 | 25.45 |
| CDX92388 | Canola | vacuole | 22.46 | 25.41 |
| CDX95058 | Canola | vacuole | 22.46 | 24.87 |
| CDY23858 | Canola | vacuole | 22.22 | 24.6 |
| CDX93560 | Canola | vacuole | 23.19 | 24.43 |
| CDY22515 | Canola | vacuole | 20.53 | 24.36 |
| VIT_04s0210g00030.t01 | Wine grape | vacuole | 45.41 | 24.32 |
| CDY47729 | Canola | vacuole | 19.08 | 24.31 |
| CDY45863 | Canola | vacuole | 19.08 | 24.31 |
| CDX73039 | Canola | vacuole | 19.08 | 24.23 |
| CDY47728 | Canola | vacuole | 19.08 | 24.16 |
| CDY16615 | Canola | endoplasmic reticulum, extracellular, vacuole | 22.95 | 24.05 |
| CDY35420 | Canola | vacuole | 20.29 | 24.0 |
| CDX79944 | Canola | vacuole | 21.74 | 24.0 |
| CDY70367 | Canola | cytosol | 15.7 | 23.72 |
| CDY06143 | Canola | vacuole | 21.98 | 23.7 |
| CDX96507 | Canola | vacuole | 18.6 | 23.62 |
| CDY45861 | Canola | vacuole | 18.6 | 23.33 |
| CDX71901 | Canola | extracellular, golgi, vacuole | 22.71 | 23.33 |
| CDX73037 | Canola | vacuole | 18.12 | 22.87 |
| CDX89027 | Canola | endoplasmic reticulum, vacuole | 22.22 | 22.77 |
| CDY05993 | Canola | endoplasmic reticulum, golgi, vacuole | 21.98 | 22.58 |
| CDX96505 | Canola | vacuole | 17.87 | 22.56 |
| CDX73038 | Canola | vacuole | 17.63 | 22.46 |
| CDX96506 | Canola | vacuole | 17.63 | 22.46 |
| CDY66189 | Canola | vacuole | 15.94 | 22.22 |
| CDY22517 | Canola | vacuole | 19.57 | 21.95 |
| CDX72080 | Canola | endoplasmic reticulum, extracellular, golgi | 19.57 | 21.95 |
| CDX79943 | Canola | vacuole | 19.32 | 21.68 |
| CDY23857 | Canola | vacuole | 19.32 | 21.68 |
| CDX68204 | Canola | vacuole | 17.15 | 21.65 |
| CDX77108 | Canola | vacuole | 19.32 | 21.62 |
| CDY30558 | Canola | vacuole | 19.32 | 21.45 |
| CDY06144 | Canola | vacuole | 19.08 | 21.41 |
| CDY66188 | Canola | vacuole | 16.91 | 21.34 |
| CDX67673 | Canola | vacuole | 18.84 | 21.08 |
| CDY54042 | Canola | vacuole | 18.6 | 20.81 |
| CDY30959 | Canola | extracellular, golgi, vacuole | 18.6 | 20.81 |
| CDY30962 | Canola | vacuole | 18.36 | 20.21 |
| CDY47397 | Canola | vacuole | 14.25 | 20.21 |
| CDY39351 | Canola | extracellular, plasma membrane, vacuole | 16.91 | 20.06 |
| CDY30963 | Canola | vacuole | 18.12 | 19.95 |
| CDX76030 | Canola | endoplasmic reticulum, golgi, vacuole | 17.87 | 19.68 |
| CDX76033 | Canola | vacuole | 17.87 | 19.68 |
Protein Annotations
| EnsemblPlants:CDX78005 | EnsemblPlantsGene:GSBRNA2T00129277001 | Gene3D:2.120.10.30 | GO:A0A078CM77 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016844 | InterPro:6-blade_b-propeller_TolB-like | InterPro:IPR011042 |
| InterPro:Strictosidine_synth_cons-reg | InterPro:Strictosidine_synthase | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF58 | PFAM:PF03088 | ProteinID:CDX78005 |
| ProteinID:CDX78005.1 | SUPFAM:SSF63829 | UniParc:UPI0004EE3016 | MapMan:50.4.3 | : | : |
Description
BnaA09g32000D
Coordinates
chrLK031814:+:582333..584506
Molecular Weight (calculated)
45536.0 Da
IEP (calculated)
7.186
GRAVY (calculated)
0.104
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLLSFSRRF LIFSTVIPFL ASIALYRLDS FDPALLPPNA LDYSTTSLPP LSNDKLLTGA ELIGVGLLNS PEDIAYHRES NFIYTGCVDG WVKRVKVTES
101: VNDSVVEDWV NTGGRPLGVA FGLHGEVIVA DAYKGLLNIS GDGKKTELLT DEADGVKFKL ADAVAVADNG VLYFTDASYK YNMRQFAFDI LEGKPHGRLM
201: SFDPTTRTTR VLLKGLYFAN GVSMSPDQTH LVFCETPMRR CSKYYINEER VEVFTQGLPG YPDNIRYDGE GHYWIAMPSG VTVLWKLAFR YPFLRKLTAI
301: AANYGLDPLI FMANAGVLGV DLDGKPIALY HDHKLSHMTT GVKIGRYLYL KDTLLVGPPQ VVISGRVGLA STYGFGLWAS FKELFGAPFL VGCCVSGAGK
401: YLKRGFAAIE CCTS
101: VNDSVVEDWV NTGGRPLGVA FGLHGEVIVA DAYKGLLNIS GDGKKTELLT DEADGVKFKL ADAVAVADNG VLYFTDASYK YNMRQFAFDI LEGKPHGRLM
201: SFDPTTRTTR VLLKGLYFAN GVSMSPDQTH LVFCETPMRR CSKYYINEER VEVFTQGLPG YPDNIRYDGE GHYWIAMPSG VTVLWKLAFR YPFLRKLTAI
301: AANYGLDPLI FMANAGVLGV DLDGKPIALY HDHKLSHMTT GVKIGRYLYL KDTLLVGPPQ VVISGRVGLA STYGFGLWAS FKELFGAPFL VGCCVSGAGK
401: YLKRGFAAIE CCTS
001: MPMFYSSRFL FFFTIVPLLV SIALYQLDTF DPAPVPSEAY ASSTTSIPPL ISDKYLTGAE FIGVGLLDKP EDIAYHQDSN LIYTGCIDGW VKRVSVHDSA
101: NDSVVEDWVN TGGRPLGIAF GVHGEVIVAD AYKGLLNISG DGKKTELLTD QAEGVKFKLT DVVAVADNGV LYFTDASYKY TLHQVKFDIL EGKPHGRLMS
201: FDPTTRVTRV LLKDLYFANG VSMSPDQTHL IFCETPMRRC SKYYINEERV EVFIQGLPGY PDNIRYDGDG HYWIAMVSGA STLWRLSMKY PFLRKITAIA
301: AKYGVELMFM KNAGVLQVDL DGNPIAYYHD QRLSHITTGI KIGNYLYCGN ILHSYIIRLD LLKYPAQKKK L
101: NDSVVEDWVN TGGRPLGIAF GVHGEVIVAD AYKGLLNISG DGKKTELLTD QAEGVKFKLT DVVAVADNGV LYFTDASYKY TLHQVKFDIL EGKPHGRLMS
201: FDPTTRVTRV LLKDLYFANG VSMSPDQTHL IFCETPMRRC SKYYINEERV EVFIQGLPGY PDNIRYDGDG HYWIAMVSGA STLWRLSMKY PFLRKITAIA
301: AKYGVELMFM KNAGVLQVDL DGNPIAYYHD QRLSHITTGI KIGNYLYCGN ILHSYIIRLD LLKYPAQKKK L
Arabidopsis Description
SSL5Protein STRICTOSIDINE SYNTHASE-LIKE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAZ7]
SUBAcon: [golgi,vacuole]
SUBAcon: [golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.