Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 5
- vacuole 6
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G51440.1 | Thale cress | golgi, vacuole | 80.59 | 80.59 |
| AT3G51430.1 | Thale cress | golgi, vacuole | 80.05 | 80.05 |
| Bra038899.1-P | Field mustard | golgi, vacuole | 76.55 | 76.55 |
| CDX73720 | Canola | golgi, vacuole | 76.28 | 76.08 |
| CDY33279 | Canola | golgi, vacuole | 76.01 | 76.01 |
| AT3G51420.1 | Thale cress | golgi, vacuole | 75.2 | 75.41 |
| CDY16307 | Canola | golgi, vacuole | 74.93 | 75.14 |
| CDY16306 | Canola | golgi, vacuole | 72.24 | 75.07 |
| CDY33280 | Canola | golgi, vacuole | 74.66 | 74.86 |
| Bra038898.1-P | Field mustard | golgi, vacuole | 72.51 | 67.76 |
| Bra036798.1-P | Field mustard | vacuole | 74.93 | 67.15 |
| CDX78005 | Canola | vacuole | 74.12 | 66.43 |
| VIT_04s0210g00060.t01 | Wine grape | cytosol, mitochondrion | 38.54 | 53.16 |
| PGSC0003DMT400003995 | Potato | golgi, vacuole | 52.29 | 51.87 |
| Solyc02g082900.2.1 | Tomato | vacuole | 51.75 | 51.75 |
| VIT_04s0210g00120.t01 | Wine grape | vacuole | 51.48 | 50.4 |
| VIT_04s0210g00100.t01 | Wine grape | cytosol | 23.72 | 50.29 |
| Os10t0543500-01 | Rice | plasma membrane | 34.5 | 50.2 |
| VIT_04s0210g00080.t01 | Wine grape | vacuole | 51.21 | 50.13 |
| VIT_04s0210g00130.t01 | Wine grape | plasma membrane, vacuole | 38.54 | 50.0 |
| TraesCS1A01G203800.1 | Wheat | cytosol, plastid, vacuole | 32.88 | 50.0 |
| VIT_04s0210g00090.t01 | Wine grape | mitochondrion, vacuole | 26.42 | 50.0 |
| VIT_04s0210g00050.t01 | Wine grape | plastid | 54.45 | 48.44 |
| KRH69688 | Soybean | golgi, vacuole | 47.17 | 47.68 |
| TraesCS1B01G217600.1 | Wheat | extracellular, golgi, vacuole | 46.63 | 47.14 |
| HORVU1Hr1G052450.8 | Barley | extracellular, golgi, vacuole | 46.63 | 47.01 |
| TraesCS1D01G207200.2 | Wheat | extracellular, golgi, vacuole | 45.82 | 46.32 |
| KRH07935 | Soybean | endoplasmic reticulum | 46.09 | 45.24 |
| GSMUA_AchrUn_... | Banana | plastid | 30.46 | 45.2 |
| KRH69689 | Soybean | plastid | 44.47 | 41.67 |
| OQU92210 | Sorghum | golgi, plastid, vacuole | 44.74 | 37.47 |
| VIT_04s0210g00040.t01 | Wine grape | cytosol, peroxisome, vacuole | 35.58 | 35.2 |
| VIT_04s0210g00030.t01 | Wine grape | vacuole | 52.29 | 25.1 |
| AT3G57030.1 | Thale cress | endoplasmic reticulum, extracellular, golgi | 24.53 | 24.33 |
| AT1G74010.1 | Thale cress | vacuole | 21.29 | 24.31 |
| AT1G08470.1 | Thale cress | endoplasmic reticulum, vacuole | 25.34 | 24.1 |
| AT5G22020.2 | Thale cress | vacuole | 25.34 | 23.8 |
| AT1G74020.1 | Thale cress | vacuole | 21.29 | 23.58 |
| AT3G59530.3 | Thale cress | golgi, vacuole | 24.8 | 22.83 |
| AT3G57020.1 | Thale cress | vacuole | 22.37 | 22.43 |
| AT1G74000.1 | Thale cress | vacuole | 19.41 | 21.88 |
| AT2G41290.1 | Thale cress | vacuole | 21.83 | 21.54 |
| AT3G57010.1 | Thale cress | extracellular, golgi, vacuole | 19.95 | 19.68 |
| AT2G41300.1 | Thale cress | vacuole | 20.75 | 19.54 |
Protein Annotations
| Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | EntrezGene:824308 | UniProt:A0A178V7T5 | ProteinID:AEE78794.1 |
| EMBL:AK175245 | EMBL:AK175564 | ArrayExpress:AT3G51450 | EnsemblPlantsGene:AT3G51450 | RefSeq:AT3G51450 | TAIR:AT3G51450 |
| RefSeq:AT3G51450-TAIR-G | EnsemblPlants:AT3G51450.1 | TAIR:AT3G51450.1 | EMBL:AY075676 | EMBL:AY087851 | EMBL:AY143926 |
| Unigene:At.35389 | ProteinID:CAB63009.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005783 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009611 | GO:GO:0009615 |
| GO:GO:0009620 | GO:GO:0009719 | GO:GO:0009723 | GO:GO:0009751 | GO:GO:0009753 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0016788 | GO:GO:0016844 | InterPro:IPR011042 | RefSeq:NP_190713.1 | ProteinID:OAP02277.1 |
| PFAM:PF03088 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF58 | UniProt:Q9SD04 | SUPFAM:SSF63829 | InterPro:Strictosidine_synth_cons-reg |
| InterPro:Strictosidine_synthase | UniParc:UPI00000AC3E0 | SEG:seg | : | : | : |
Description
SSL7Protein STRICTOSIDINE SYNTHASE-LIKE 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SD04]
Coordinates
chr3:+:19090947..19092511
Molecular Weight (calculated)
41126.6 Da
IEP (calculated)
5.396
GRAVY (calculated)
0.070
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVLFSSRSL ILSIIVPLLI SIALYKLDTF DPAIVPSDAF TSSATSLPPL INDEFLTGAE FIGVGLLNIP EDIAYHKESN LIYTGCVDGW VKRVKVADSV
101: NDSVVEDWVN TGGRPLGIAF GIHGEVIVAD VHKGLLNISG DGKKTELLTD EADGVKFKLT DAVTVADNGV LYFTDASYKY TLNQLSLDML EGKPFGRLLS
201: FDPTTRVTKV LLKDLYFANG ITISPDQTHL IFCETPMKRC SKYYISEERV EVFTQSLPGY PDNIRYDGDG HYWIALPSGV TTLWNISLKY PFLRKLTAMV
301: AKYGVDLMFM ENAGVLQVDL DGNPIAYYHD PKLSHIATCD KIGKYLYCGS LSQSHILRLD LLKYPAQNKK L
101: NDSVVEDWVN TGGRPLGIAF GIHGEVIVAD VHKGLLNISG DGKKTELLTD EADGVKFKLT DAVTVADNGV LYFTDASYKY TLNQLSLDML EGKPFGRLLS
201: FDPTTRVTKV LLKDLYFANG ITISPDQTHL IFCETPMKRC SKYYISEERV EVFTQSLPGY PDNIRYDGDG HYWIALPSGV TTLWNISLKY PFLRKLTAMV
301: AKYGVDLMFM ENAGVLQVDL DGNPIAYYHD PKLSHIATCD KIGKYLYCGS LSQSHILRLD LLKYPAQNKK L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.