Factsheet for AT2G41300.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 5
vacuole 6
plasma membrane 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70367	Canola	cytosol	62.18	89.42
CDY22517	Canola	vacuole	73.35	78.32
CDY23857	Canola	vacuole	73.1	78.05
CDX79943	Canola	vacuole	73.1	78.05
Bra004614.1-P	Field mustard	vacuole	73.1	78.05
Bra000223.1-P	Field mustard	vacuole	72.84	77.78
AT3G57010.1	Thale cress	extracellular, golgi, vacuole	57.87	60.64
AT3G57020.1	Thale cress	vacuole	55.84	59.46
KRH66809	Soybean	endoplasmic reticulum	42.39	45.01
AT3G57030.1	Thale cress	endoplasmic reticulum, extracellular, golgi	42.13	44.38
KRG95135	Soybean	endoplasmic reticulum	41.62	44.2
AT1G08470.1	Thale cress	endoplasmic reticulum, vacuole	37.82	38.21
AT5G22020.2	Thale cress	vacuole	36.29	36.2
AT2G41290.1	Thale cress	vacuole	30.96	32.45
AT1G74010.1	Thale cress	vacuole	26.65	32.31
AT1G74000.1	Thale cress	vacuole	26.9	32.22
AT1G74020.1	Thale cress	vacuole	26.65	31.34
AT3G59530.3	Thale cress	golgi, vacuole	29.95	29.28
AT3G51420.1	Thale cress	golgi, vacuole	19.8	21.08
AT3G51440.1	Thale cress	golgi, vacuole	19.8	21.02
AT3G51450.1	Thale cress	vacuole	19.54	20.75
AT3G51430.1	Thale cress	golgi, vacuole	19.54	20.75

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	EntrezGene:818729	ProteinID:AAC78542.1	ProteinID:AEC09958.1
ArrayExpress:AT2G41300	EnsemblPlantsGene:AT2G41300	RefSeq:AT2G41300	TAIR:AT2G41300	RefSeq:AT2G41300-TAIR-G	EnsemblPlants:AT2G41300.1
TAIR:AT2G41300.1	Unigene:At.42851	UniProt:F4IJZ6	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005783	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016788
GO:GO:0016844	InterPro:IPR011042	RefSeq:NP_181662.3	PFAM:PF03088	PO:PO:0000230	PO:PO:0000293
PO:PO:0007611	PO:PO:0009005	PO:PO:0009030	PO:PO:0009046	PO:PO:0020100	PO:PO:0020137
PANTHER:PTHR10426	PANTHER:PTHR10426:SF24	SUPFAM:SSF63829	Symbol:SSL1	SignalP:SignalP-noTM	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	UniParc:UPI0001505893	SEG:seg	:	:	:

Description

SSL1Protein STRICTOSIDINE SYNTHASE-LIKE 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IJZ6]

Coordinates

chr2:-:17214219..17216292

Molecular Weight (calculated)

44393.8 Da

IEP (calculated)

6.652

GRAVY (calculated)

-0.403

Length

394 amino acids

Sequence
(BLAST)

001: MESLLLIAYA FLYLFLLSHE AEYKINADQS ENSNVGRFGG NYGRLGRLSG SIHHWTGEYR GLEKRPNHSE DNPPSRGWTG EPGLDPRGEG PYVGVTDGRI
101: LKWSGEDLGW IEFAYSSPHR KNCSSHKVEP ACGRPLGLSF EKKSGDLYFC DGYLGVMKVG PKGGLAEKVV DEVEGQKVMF ANQMDIDEEE DAIYFNDSSD
201: TYHFGDVFYA FLCGEKTGRA IRYDKKTKEA KVIMDRLHFP NGLALSIDGS FVLSCEVPTQ LVHRYWAKGP NAGTRDIFAK LPGYADNIRR TETGDFWVAL
301: HSKKTPFSRL SMIHPWVGKF FIKTLKMELL VFLFEGGKPH AVAVKLSGKT GEIMEILEDS EGKNMKFISE VQERDGRLWF GSVFLPSVWV LDRQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.