Subcellular Localization
min:
: max
Winner_takes_all: golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 6
- plasma membrane 5
- endoplasmic reticulum 5
- vacuole 6
- plastid 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038899.1-P | Field mustard | golgi, vacuole | 99.19 | 99.19 |
| CDY16306 | Canola | golgi, vacuole | 90.84 | 94.4 |
| CDY16307 | Canola | golgi, vacuole | 81.13 | 81.35 |
| CDY33280 | Canola | golgi, vacuole | 80.59 | 80.81 |
| CDX73720 | Canola | golgi, vacuole | 80.86 | 80.65 |
| AT3G51440.1 | Thale cress | golgi, vacuole | 78.17 | 78.17 |
| AT3G51430.1 | Thale cress | golgi, vacuole | 77.9 | 77.9 |
| AT3G51420.1 | Thale cress | golgi, vacuole | 76.55 | 76.76 |
| AT3G51450.1 | Thale cress | vacuole | 76.01 | 76.01 |
| CDX78005 | Canola | vacuole | 77.36 | 69.32 |
| VIT_04s0210g00060.t01 | Wine grape | cytosol, mitochondrion | 37.47 | 51.67 |
| PGSC0003DMT400003995 | Potato | golgi, vacuole | 52.02 | 51.6 |
| Solyc02g082900.2.1 | Tomato | vacuole | 51.21 | 51.21 |
| Os10t0543500-01 | Rice | plasma membrane | 33.96 | 49.41 |
| TraesCS1A01G203800.1 | Wheat | cytosol, plastid, vacuole | 32.08 | 48.77 |
| VIT_04s0210g00120.t01 | Wine grape | vacuole | 49.33 | 48.28 |
| KRH69688 | Soybean | golgi, vacuole | 47.71 | 48.23 |
| VIT_04s0210g00080.t01 | Wine grape | vacuole | 49.06 | 48.02 |
| VIT_04s0210g00100.t01 | Wine grape | cytosol | 22.64 | 48.0 |
| VIT_04s0210g00090.t01 | Wine grape | mitochondrion, vacuole | 24.8 | 46.94 |
| VIT_04s0210g00050.t01 | Wine grape | plastid | 52.29 | 46.52 |
| VIT_04s0210g00130.t01 | Wine grape | plasma membrane, vacuole | 35.85 | 46.5 |
| TraesCS1B01G217600.1 | Wheat | extracellular, golgi, vacuole | 45.55 | 46.05 |
| HORVU1Hr1G052450.8 | Barley | extracellular, golgi, vacuole | 45.55 | 45.92 |
| KRH07935 | Soybean | endoplasmic reticulum | 46.63 | 45.77 |
| TraesCS1D01G207200.2 | Wheat | extracellular, golgi, vacuole | 45.01 | 45.5 |
| GSMUA_AchrUn_... | Banana | plastid | 29.11 | 43.2 |
| KRH69689 | Soybean | plastid | 43.13 | 40.4 |
| OQU92210 | Sorghum | golgi, plastid, vacuole | 45.55 | 38.15 |
| VIT_04s0210g00040.t01 | Wine grape | cytosol, peroxisome, vacuole | 34.77 | 34.4 |
| CDX95058 | Canola | vacuole | 26.42 | 26.2 |
| CDX93560 | Canola | vacuole | 27.22 | 25.7 |
| CDX92388 | Canola | vacuole | 24.8 | 25.14 |
| CDX72079 | Canola | vacuole | 22.1 | 24.85 |
| CDY47728 | Canola | vacuole | 21.83 | 24.77 |
| VIT_04s0210g00030.t01 | Wine grape | vacuole | 50.94 | 24.45 |
| CDX73037 | Canola | vacuole | 21.56 | 24.39 |
| CDY23858 | Canola | vacuole | 24.53 | 24.33 |
| CDX71901 | Canola | extracellular, golgi, vacuole | 26.42 | 24.32 |
| CDX89027 | Canola | endoplasmic reticulum, vacuole | 26.42 | 24.26 |
| CDY70367 | Canola | cytosol | 17.79 | 24.09 |
| CDX96505 | Canola | vacuole | 21.29 | 24.09 |
| CDY22515 | Canola | vacuole | 22.64 | 24.07 |
| CDY16615 | Canola | endoplasmic reticulum, extracellular, vacuole | 25.61 | 24.05 |
| CDY05993 | Canola | endoplasmic reticulum, golgi, vacuole | 25.88 | 23.82 |
| CDX79944 | Canola | vacuole | 23.99 | 23.73 |
| CDY35420 | Canola | vacuole | 22.37 | 23.71 |
| CDY47729 | Canola | vacuole | 20.75 | 23.69 |
| CDY45863 | Canola | vacuole | 20.75 | 23.69 |
| CDY45861 | Canola | vacuole | 21.02 | 23.64 |
| CDX73039 | Canola | vacuole | 20.75 | 23.62 |
| CDY66189 | Canola | vacuole | 18.6 | 23.23 |
| CDY06143 | Canola | vacuole | 23.99 | 23.18 |
| CDX96507 | Canola | vacuole | 20.22 | 23.01 |
| CDX96506 | Canola | vacuole | 19.95 | 22.77 |
| CDY22517 | Canola | vacuole | 22.37 | 22.49 |
| CDX73038 | Canola | vacuole | 19.68 | 22.46 |
| CDX68204 | Canola | vacuole | 19.68 | 22.26 |
| CDX79943 | Canola | vacuole | 22.1 | 22.22 |
| CDY23857 | Canola | vacuole | 22.1 | 22.22 |
| CDX72080 | Canola | endoplasmic reticulum, extracellular, golgi | 21.83 | 21.95 |
| CDY66188 | Canola | vacuole | 19.41 | 21.95 |
| CDY06144 | Canola | vacuole | 21.56 | 21.68 |
| CDX77108 | Canola | vacuole | 21.02 | 21.08 |
| CDY30558 | Canola | vacuole | 21.02 | 20.91 |
| CDY30959 | Canola | extracellular, golgi, vacuole | 20.75 | 20.81 |
| CDX67673 | Canola | vacuole | 20.75 | 20.81 |
| CDY54042 | Canola | vacuole | 20.49 | 20.54 |
| CDY30963 | Canola | vacuole | 20.75 | 20.48 |
| CDY30962 | Canola | vacuole | 20.49 | 20.21 |
| CDY39351 | Canola | extracellular, plasma membrane, vacuole | 18.87 | 20.06 |
| CDX76033 | Canola | vacuole | 20.22 | 19.95 |
| CDX76030 | Canola | endoplasmic reticulum, golgi, vacuole | 19.95 | 19.68 |
| CDY47397 | Canola | vacuole | 15.36 | 19.52 |
Protein Annotations
| Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | GO:A0A078H6X5 | UniProt:A0A078H6X5 | EnsemblPlants:CDY33279 |
| ProteinID:CDY33279 | ProteinID:CDY33279.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0016844 | EnsemblPlantsGene:GSBRNA2T00054049001 | InterPro:IPR011042 | PFAM:PF03088 | PANTHER:PTHR10426 |
| PANTHER:PTHR10426:SF58 | SUPFAM:SSF63829 | InterPro:Strictosidine_synth_cons-reg | InterPro:Strictosidine_synthase | UniParc:UPI0004EF4723 | SEG:seg |
Description
BnaA01g19460DBnaA01g19460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H6X5]
Coordinates
chrLK032310:-:102992..104501
Molecular Weight (calculated)
41709.2 Da
IEP (calculated)
6.511
GRAVY (calculated)
-0.029
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MPLLFFSRRF LIFSTIIPFI ASITLYRLDT FDPSHLPADA LVYSTTSIPP LVNDQLLTGA EFIGVGLLNK PEDIAYDRDS GLIYTGCIDG WVKRVKALES
101: CHDSVVEDWV NTGGRPLGLA FGLHGEVIVA DAYKGLLNIS DDGRKTELLT DEAEGVRFKL TDAVAVGDNG VLYFTDASYK YDYSQASFDF LEGKPHGRLM
201: SFNPTTRTTR VLLKDLYFAN GISMSPDQTH LIFCETPVRR CSKYYINEER VEVFIQGLPG YPDNIRYDGD GHYWIAIPKG VTTLWKLSMR YPLLRKVTAM
301: VAKWGFNLMF AEDAGVLQVD LDGNPIAFYH DHKISHLTTG VKIGKYLYCG SLLHSRILRL DLLKYPAQKS L
101: CHDSVVEDWV NTGGRPLGLA FGLHGEVIVA DAYKGLLNIS DDGRKTELLT DEAEGVRFKL TDAVAVGDNG VLYFTDASYK YDYSQASFDF LEGKPHGRLM
201: SFNPTTRTTR VLLKDLYFAN GISMSPDQTH LIFCETPVRR CSKYYINEER VEVFIQGLPG YPDNIRYDGD GHYWIAIPKG VTTLWKLSMR YPLLRKVTAM
301: VAKWGFNLMF AEDAGVLQVD LDGNPIAFYH DHKISHLTTG VKIGKYLYCG SLLHSRILRL DLLKYPAQKS L
001: MPMFYSSRFL FFFTIVPLLV SIALYQLDTF DPAPVPSEAY ASSTTSIPPL ISDKYLTGAE FIGVGLLDKP EDIAYHQDSN LIYTGCIDGW VKRVSVHDSA
101: NDSVVEDWVN TGGRPLGIAF GVHGEVIVAD AYKGLLNISG DGKKTELLTD QAEGVKFKLT DVVAVADNGV LYFTDASYKY TLHQVKFDIL EGKPHGRLMS
201: FDPTTRVTRV LLKDLYFANG VSMSPDQTHL IFCETPMRRC SKYYINEERV EVFIQGLPGY PDNIRYDGDG HYWIAMVSGA STLWRLSMKY PFLRKITAIA
301: AKYGVELMFM KNAGVLQVDL DGNPIAYYHD QRLSHITTGI KIGNYLYCGN ILHSYIIRLD LLKYPAQKKK L
101: NDSVVEDWVN TGGRPLGIAF GVHGEVIVAD AYKGLLNISG DGKKTELLTD QAEGVKFKLT DVVAVADNGV LYFTDASYKY TLHQVKFDIL EGKPHGRLMS
201: FDPTTRVTRV LLKDLYFANG VSMSPDQTHL IFCETPMRRC SKYYINEERV EVFIQGLPGY PDNIRYDGDG HYWIAMVSGA STLWRLSMKY PFLRKITAIA
301: AKYGVELMFM KNAGVLQVDL DGNPIAYYHD QRLSHITTGI KIGNYLYCGN ILHSYIIRLD LLKYPAQKKK L
Arabidopsis Description
SSL5Protein STRICTOSIDINE SYNTHASE-LIKE 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAZ7]
SUBAcon: [golgi,vacuole]
SUBAcon: [golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.