Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007293.1-P | Field mustard | vacuole | 99.46 | 99.46 |
| CDX72080 | Canola | endoplasmic reticulum, extracellular, golgi | 96.48 | 96.48 |
| CDY30959 | Canola | extracellular, golgi, vacuole | 86.72 | 86.49 |
| CDX67673 | Canola | vacuole | 86.18 | 85.95 |
| CDX77108 | Canola | vacuole | 86.18 | 85.95 |
| CDY54042 | Canola | vacuole | 86.18 | 85.95 |
| CDY30558 | Canola | vacuole | 86.18 | 85.25 |
| CDY39351 | Canola | extracellular, plasma membrane, vacuole | 78.32 | 82.81 |
| AT3G57020.1 | Thale cress | vacuole | 81.03 | 80.81 |
| CDX76033 | Canola | vacuole | 66.12 | 64.89 |
| CDY30963 | Canola | vacuole | 65.58 | 64.36 |
| CDX76030 | Canola | endoplasmic reticulum, golgi, vacuole | 65.31 | 64.1 |
| CDY30962 | Canola | vacuole | 65.31 | 64.1 |
| CDX79943 | Canola | vacuole | 63.14 | 63.14 |
| CDY23857 | Canola | vacuole | 62.87 | 62.87 |
| CDY22517 | Canola | vacuole | 62.6 | 62.6 |
| CDY70367 | Canola | cytosol | 46.34 | 62.41 |
| CDY47397 | Canola | vacuole | 47.15 | 59.59 |
| CDX72079 | Canola | vacuole | 38.48 | 43.03 |
| KRH66809 | Soybean | endoplasmic reticulum | 40.38 | 40.16 |
| KRG95135 | Soybean | endoplasmic reticulum | 40.38 | 40.16 |
| CDY06143 | Canola | vacuole | 41.46 | 39.84 |
| CDX95058 | Canola | vacuole | 38.21 | 37.7 |
| CDX93560 | Canola | vacuole | 39.84 | 37.4 |
| CDX92388 | Canola | vacuole | 36.59 | 36.89 |
| CDY16615 | Canola | endoplasmic reticulum, extracellular, vacuole | 38.21 | 35.7 |
| CDY22515 | Canola | vacuole | 32.79 | 34.67 |
| CDY35420 | Canola | vacuole | 31.98 | 33.71 |
| CDY47728 | Canola | vacuole | 29.0 | 32.72 |
| CDX79944 | Canola | vacuole | 33.06 | 32.53 |
| CDY23858 | Canola | vacuole | 32.79 | 32.35 |
| CDX73037 | Canola | vacuole | 28.46 | 32.01 |
| CDX96505 | Canola | vacuole | 27.64 | 31.1 |
| CDY45861 | Canola | vacuole | 27.64 | 30.91 |
| CDX96507 | Canola | vacuole | 26.56 | 30.06 |
| CDX73039 | Canola | vacuole | 26.56 | 30.06 |
| CDX89027 | Canola | endoplasmic reticulum, vacuole | 32.79 | 29.95 |
| CDX71901 | Canola | extracellular, golgi, vacuole | 32.52 | 29.78 |
| CDY66189 | Canola | vacuole | 23.85 | 29.63 |
| CDY05993 | Canola | endoplasmic reticulum, golgi, vacuole | 32.25 | 29.53 |
| CDX68204 | Canola | vacuole | 26.02 | 29.27 |
| CDY66188 | Canola | vacuole | 25.2 | 28.35 |
| CDY47729 | Canola | vacuole | 24.93 | 28.31 |
| CDY45863 | Canola | vacuole | 24.93 | 28.31 |
| CDX96506 | Canola | vacuole | 24.66 | 28.0 |
| CDX73038 | Canola | vacuole | 24.39 | 27.69 |
| CDY33279 | Canola | golgi, vacuole | 21.68 | 21.56 |
| CDX73720 | Canola | golgi, vacuole | 21.68 | 21.51 |
| CDY16306 | Canola | golgi, vacuole | 20.33 | 21.01 |
| CDY16307 | Canola | golgi, vacuole | 20.6 | 20.54 |
| CDY33280 | Canola | golgi, vacuole | 20.33 | 20.27 |
| CDX78005 | Canola | vacuole | 21.41 | 19.08 |
Protein Annotations
| Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | GO:A0A078EZY2 | EnsemblPlants:CDY06144 | ProteinID:CDY06144 |
| ProteinID:CDY06144.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0016844 | EnsemblPlantsGene:GSBRNA2T00122030001 | InterPro:IPR011042 | PFAM:PF03088 | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF24 |
| SUPFAM:SSF63829 | InterPro:Strictosidine_synth_cons-reg | InterPro:Strictosidine_synthase | TMHMM:TMhelix | UniParc:UPI0004EF3967 | SEG:seg |
Description
BnaA09g36360D
Coordinates
chrLK031967:+:1001696..1003994
Molecular Weight (calculated)
41565.1 Da
IEP (calculated)
7.152
GRAVY (calculated)
-0.278
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTSQKAPTW AIAVVLAVFA VISYQILFAP DDLKGTKNIL PMAKTIPLPV DGPESIEWDP QGEGPYAAVV DGRILKWRGH DLGWVEFAHT SPYRGNCSRH
101: EVVPTCGRPL GLSFEKKTGD LYICDGYLGV MKVGPEGGLA ELVVDQAEGR KVMFANQMDI DEEEDVLYFN DSNDKYHFRE VFYVLFNGER SGRVIRFNKK
201: TKEAKVVMDN LRCNNGLALN KDRSFLITCE SATGLVHRYW IKGPKAGTRD IFSKVPGYPD NIRLTPTGDF WLGIHCKKNL IGRLIVNNKW LGKLVEKTVP
301: LNFLIQEMNG FRQQGIAVKI SGETGEVLEI LEDKEGKHMQ YVSEAYERDD GKLWFGSVFS PAVWVLDRK
101: EVVPTCGRPL GLSFEKKTGD LYICDGYLGV MKVGPEGGLA ELVVDQAEGR KVMFANQMDI DEEEDVLYFN DSNDKYHFRE VFYVLFNGER SGRVIRFNKK
201: TKEAKVVMDN LRCNNGLALN KDRSFLITCE SATGLVHRYW IKGPKAGTRD IFSKVPGYPD NIRLTPTGDF WLGIHCKKNL IGRLIVNNKW LGKLVEKTVP
301: LNFLIQEMNG FRQQGIAVKI SGETGEVLEI LEDKEGKHMQ YVSEAYERDD GKLWFGSVFS PAVWVLDRK
001: MESLLLIAYA FLYLFLLSHE AEYKINADQS ENSNVGRFGG NYGRLGRLSG SIHHWTGEYR GLEKRPNHSE DNPPSRGWTG EPGLDPRGEG PYVGVTDGRI
101: LKWSGEDLGW IEFAYSSPHR KNCSSHKVEP ACGRPLGLSF EKKSGDLYFC DGYLGVMKVG PKGGLAEKVV DEVEGQKVMF ANQMDIDEEE DAIYFNDSSD
201: TYHFGDVFYA FLCGEKTGRA IRYDKKTKEA KVIMDRLHFP NGLALSIDGS FVLSCEVPTQ LVHRYWAKGP NAGTRDIFAK LPGYADNIRR TETGDFWVAL
301: HSKKTPFSRL SMIHPWVGKF FIKTLKMELL VFLFEGGKPH AVAVKLSGKT GEIMEILEDS EGKNMKFISE VQERDGRLWF GSVFLPSVWV LDRQ
101: LKWSGEDLGW IEFAYSSPHR KNCSSHKVEP ACGRPLGLSF EKKSGDLYFC DGYLGVMKVG PKGGLAEKVV DEVEGQKVMF ANQMDIDEEE DAIYFNDSSD
201: TYHFGDVFYA FLCGEKTGRA IRYDKKTKEA KVIMDRLHFP NGLALSIDGS FVLSCEVPTQ LVHRYWAKGP NAGTRDIFAK LPGYADNIRR TETGDFWVAL
301: HSKKTPFSRL SMIHPWVGKF FIKTLKMELL VFLFEGGKPH AVAVKLSGKT GEIMEILEDS EGKNMKFISE VQERDGRLWF GSVFLPSVWV LDRQ
Arabidopsis Description
SSL1Protein STRICTOSIDINE SYNTHASE-LIKE 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IJZ6]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.