Factsheet for HORVU3Hr1G109810.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
TargetP:	secretory
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G559000.1	Wheat	cytosol	48.71	90.91
TraesCS3B01G558800.1	Wheat	cytosol	54.44	90.91
TraesCS3D01G504000.1	Wheat	vacuole	89.4	90.43
TraesCS3B01G559100.1	Wheat	vacuole	88.25	89.28
TraesCS3A01G496700.1	Wheat	golgi, vacuole	88.25	89.28
TraesCS3A01G496900.1	Wheat	vacuole	88.83	88.57
TraesCS3D01G503900.1	Wheat	nucleus	75.93	85.21
HORVU5Hr1G078340.1	Barley	golgi, vacuole	54.15	77.46
HORVU2Hr1G064060.1	Barley	mitochondrion, vacuole	51.29	70.47
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	71.35	66.58
HORVU7Hr1G028580.1	Barley	golgi, vacuole	66.48	65.91
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	66.19	64.89
HORVU7Hr1G028550.2	Barley	plastid	27.22	53.37
HORVU2Hr1G013460.2	Barley	golgi, mitochondrion, vacuole	42.98	51.55
HORVU6Hr1G026020.1	Barley	cytosol	35.24	49.6
HORVU2Hr1G012970.2	Barley	mitochondrion	49.28	49.14
HORVU5Hr1G093840.1	Barley	vacuole	47.28	48.67
HORVU3Hr1G065520.3	Barley	extracellular	44.13	47.83
HORVU5Hr1G009400.2	Barley	cytosol, mitochondrion, plastid, vacuole	18.62	47.79
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	46.7	47.11
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	41.26	46.45
GSMUA_Achr5P05340_001	Banana	vacuole	46.42	45.13
HORVU5Hr1G058940.2	Barley	vacuole	46.7	44.41
VIT_13s0074g00070.t01	Wine grape	vacuole	32.66	41.61
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	21.2	40.88
VIT_10s0042g00010.t01	Wine grape	vacuole	36.68	40.63
VIT_00s0575g00010.t01	Wine grape	vacuole	36.1	40.38
VIT_00s0575g00020.t01	Wine grape	vacuole	37.25	40.37
VIT_10s0042g00030.t01	Wine grape	vacuole	31.52	40.29
VIT_10s0042g00020.t01	Wine grape	vacuole	36.68	39.75
VIT_13s0074g00080.t01	Wine grape	vacuole	36.68	39.75
VIT_10s0071g00020.t01	Wine grape	vacuole	34.67	39.16
VIT_10s0042g00050.t01	Wine grape	vacuole	36.1	39.13
VIT_10s0071g00010.t01	Wine grape	vacuole	35.82	38.82
PGSC0003DMT400063282	Potato	extracellular, vacuole	16.91	38.06
KRH07462	Soybean	vacuole	37.82	38.04
PGSC0003DMT400056839	Potato	vacuole	32.95	36.86
KRH45407	Soybean	nucleus	36.39	36.39
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	24.07	35.74
AT1G74010.1	Thale cress	vacuole	33.24	35.69
Bra003820.1-P	Field mustard	vacuole	32.95	35.6
VIT_10s0071g00250.t01	Wine grape	vacuole	34.67	35.59
Bra008127.1-P	Field mustard	vacuole	33.24	35.37
HORVU5Hr1G114800.1	Barley	extracellular	21.78	35.35
CDY45861	Canola	vacuole	33.24	35.15
VIT_17s0000g04600.t01	Wine grape	vacuole	34.38	34.99
Solyc03g114560.2.1	Tomato	extracellular	32.66	34.86
AT1G74020.1	Thale cress	vacuole	33.24	34.63
Solyc12g039070.1.1	Tomato	nucleus	32.95	34.53
KRH56734	Soybean	vacuole	33.81	34.5
CDY47729	Canola	vacuole	32.09	34.46
CDX96505	Canola	vacuole	32.38	34.45
CDX73037	Canola	vacuole	32.38	34.45
AT1G74000.1	Thale cress	vacuole	32.38	34.35
CDY66189	Canola	vacuole	29.23	34.34
Bra008126.1-P	Field mustard	vacuole	32.09	34.25
CDY47728	Canola	vacuole	32.09	34.25
Bra008124.1-P	Field mustard	vacuole	31.81	34.15
Solyc03g114550.1.1	Tomato	vacuole	26.65	33.94
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	26.93	33.94
KRH03206	Soybean	vacuole	32.66	33.93
CDY45863	Canola	vacuole	31.52	33.85
CDX68204	Canola	vacuole	31.81	33.84
KRH54773	Soybean	vacuole	32.66	33.83
PGSC0003DMT400063277	Potato	vacuole	32.09	33.73
CDX96506	Canola	vacuole	31.23	33.54
CDX73038	Canola	vacuole	31.23	33.54
CDY66188	Canola	vacuole	31.52	33.54
PGSC0003DMT400063286	Potato	vacuole	32.09	33.53
CDX96507	Canola	vacuole	31.23	33.44
Bra015943.1-P	Field mustard	vacuole	31.23	33.44
PGSC0003DMT400063274	Potato	vacuole	32.09	33.33
Solyc03g114540.1.1	Tomato	vacuole	32.09	33.33
Solyc03g114530.2.1	Tomato	vacuole	31.52	33.13
CDX73039	Canola	vacuole	30.95	33.13
HORVU5Hr1G095260.1	Barley	extracellular	37.25	32.58
HORVU5Hr1G043200.4	Barley	vacuole	34.67	32.35
VIT_17s0000g04610.t01	Wine grape	vacuole	33.24	31.61
HORVU5Hr1G114720.1	Barley	plastid	16.33	30.0
KRH63133	Soybean	peroxisome, vacuole	14.04	28.32
HORVU4Hr1G061230.2	Barley	peroxisome, vacuole	34.67	28.27
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	35.82	27.59
HORVU7Hr1G019170.1	Barley	cytosol	13.47	27.33
HORVU4Hr1G016850.1	Barley	cytosol	13.18	26.44
HORVU1Hr1G052450.8	Barley	extracellular, golgi, vacuole	27.51	26.09
HORVU6Hr1G025030.1	Barley	cytosol	7.45	23.42
Bra015944.1-P	Field mustard	vacuole	30.37	17.76

Protein Annotations

EnsemblPlants:HORVU3Hr1G109810.1	EnsemblPlantsGene:HORVU3Hr1G109810	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF28	PFAM:PF03088	SEG:seg	SignalP:SignalP-TM
SUPFAM:SSF63829	TMHMM:TMhelix	UniParc:UPI000B4849E3	UniProt:A0A287MN92	MapMan:50.4.3	:

Description

No Description!

Coordinates

chrchr3H:+:679402684..679403917

Molecular Weight (calculated)

38107.5 Da

IEP (calculated)

9.503

GRAVY (calculated)

-0.393

Length

349 amino acids

Sequence
(BLAST)

001: KQQIAMGCSM SRLLKTTVTL LILVLLLMPG AIAATAASFD ASRTKQLPLP RGTVHGPESF AFDGNGQGPY SGVSDGRILK WNGDKQGWTT YAYGPGYDSH
101: TCTACKFSRE TENSRCGRPL GLRFNQKSGD LYVADAYKGL MRVPPGGGEA TVLVNQVDGF PLRFTNGVDV DQVTGRVYFT DSSMNYQRSQ HEMVTRTGDS
201: TGRLMSYDPH TSDVTVLQAG MTYPNGVALS ADRSHLVVAS TGPCKLLRHW INGANAGTSE PFAHLPGYPD NVRPDMKGGY WVVLHREKNE LPFGRGSHRL
301: AVRVGDDGRI VEEMRGSKMV RPTEIMERPN GKIYLGSVEL PYAGVVKRK

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.