Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G558800.1 | Wheat | cytosol | 98.4 | 88.04 |
| TraesCS5B01G330900.1 | Wheat | extracellular, vacuole | 74.33 | 75.14 |
| TraesCS3D01G503900.1 | Wheat | nucleus | 95.72 | 57.56 |
| TraesCS3B01G559100.1 | Wheat | vacuole | 98.93 | 53.62 |
| TraesCS3A01G496700.1 | Wheat | golgi, vacuole | 94.65 | 51.3 |
| TraesCS3A01G496900.1 | Wheat | vacuole | 95.19 | 50.86 |
| HORVU3Hr1G109810.1 | Barley | golgi, vacuole | 90.91 | 48.71 |
| TraesCS7B01G040900.1 | Wheat | golgi, vacuole | 77.01 | 41.38 |
| TraesCS3B01G338500.1 | Wheat | extracellular, golgi, vacuole | 75.4 | 41.11 |
| TraesCS7B01G040400.1 | Wheat | golgi, vacuole | 75.94 | 40.8 |
| TraesCS2B01G281700.1 | Wheat | golgi, vacuole | 73.8 | 40.12 |
| HORVU5Hr1G078340.1 | Barley | golgi, vacuole | 41.18 | 31.56 |
| GSMUA_Achr3P06240_001 | Banana | cytosol, mitochondrion, peroxisome, vacuole | 49.73 | 30.0 |
| TraesCS3B01G289800.1 | Wheat | vacuole | 52.94 | 29.46 |
| TraesCS5B01G383000.1 | Wheat | vacuole | 52.41 | 28.91 |
| TraesCS5B01G382800.1 | Wheat | vacuole | 52.41 | 28.74 |
| TraesCS2B01G093000.1 | Wheat | golgi, vacuole | 50.8 | 27.7 |
| TraesCS2B01G092900.1 | Wheat | golgi, vacuole | 50.27 | 27.49 |
| TraesCS5B01G195400.1 | Wheat | vacuole | 52.41 | 26.92 |
| GSMUA_Achr5P05340_001 | Banana | vacuole | 51.34 | 26.74 |
| KRH63133 | Soybean | peroxisome, vacuole | 24.6 | 26.59 |
| TraesCS5B01G195300.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 49.2 | 26.59 |
| Bra008125.1-P | Field mustard | cytosol, peroxisome, vacuole | 30.48 | 24.26 |
| PGSC0003DMT400001736 | Potato | cytosol, peroxisome, vacuole | 35.29 | 23.83 |
| VIT_10s0042g00010.t01 | Wine grape | vacuole | 39.04 | 23.17 |
| VIT_10s0042g00020.t01 | Wine grape | vacuole | 39.04 | 22.67 |
| PGSC0003DMT400056839 | Potato | vacuole | 37.43 | 22.44 |
| VIT_13s0074g00080.t01 | Wine grape | vacuole | 38.5 | 22.36 |
| VIT_00s0575g00010.t01 | Wine grape | vacuole | 36.9 | 22.12 |
| VIT_00s0575g00020.t01 | Wine grape | vacuole | 37.97 | 22.05 |
| VIT_10s0071g00010.t01 | Wine grape | vacuole | 37.43 | 21.74 |
| VIT_10s0042g00050.t01 | Wine grape | vacuole | 37.43 | 21.74 |
| Solyc12g039070.1.1 | Tomato | nucleus | 37.97 | 21.32 |
| VIT_10s0071g00020.t01 | Wine grape | vacuole | 34.76 | 21.04 |
| VIT_13s0074g00070.t01 | Wine grape | vacuole | 30.48 | 20.8 |
| KRH07462 | Soybean | vacuole | 38.5 | 20.75 |
| PGSC0003DMT400063277 | Potato | vacuole | 36.36 | 20.48 |
| Solyc03g114560.2.1 | Tomato | extracellular | 35.29 | 20.18 |
| VIT_10s0042g00030.t01 | Wine grape | vacuole | 29.41 | 20.15 |
| AT1G74010.1 | Thale cress | vacuole | 34.76 | 20.0 |
| Bra003820.1-P | Field mustard | vacuole | 34.22 | 19.81 |
| Solyc03g114530.2.1 | Tomato | vacuole | 34.76 | 19.58 |
| KRH45407 | Soybean | nucleus | 36.36 | 19.48 |
| VIT_17s0000g04600.t01 | Wine grape | vacuole | 35.29 | 19.24 |
| PGSC0003DMT400063286 | Potato | vacuole | 34.22 | 19.16 |
| CDY45861 | Canola | vacuole | 33.69 | 19.09 |
| TraesCS5B01G395100.1 | Wheat | vacuole | 40.64 | 19.05 |
| Solyc03g114540.1.1 | Tomato | vacuole | 34.22 | 19.05 |
| PGSC0003DMT400063274 | Potato | vacuole | 34.22 | 19.05 |
| KRH54773 | Soybean | vacuole | 34.22 | 18.99 |
| CDY66188 | Canola | vacuole | 33.16 | 18.9 |
| Bra008127.1-P | Field mustard | vacuole | 33.16 | 18.9 |
| CDX68204 | Canola | vacuole | 32.62 | 18.6 |
| VIT_10s0071g00250.t01 | Wine grape | vacuole | 33.69 | 18.53 |
| CDX73038 | Canola | vacuole | 32.09 | 18.46 |
| CDX96506 | Canola | vacuole | 32.09 | 18.46 |
| CDX96505 | Canola | vacuole | 32.09 | 18.29 |
| AT1G74000.1 | Thale cress | vacuole | 32.09 | 18.24 |
| AT1G74020.1 | Thale cress | vacuole | 32.62 | 18.21 |
| TraesCS5B01G133600.1 | Wheat | extracellular, vacuole | 36.36 | 18.18 |
| CDX73039 | Canola | vacuole | 31.55 | 18.1 |
| Bra008126.1-P | Field mustard | vacuole | 31.55 | 18.04 |
| CDY47728 | Canola | vacuole | 31.55 | 18.04 |
| CDX73037 | Canola | vacuole | 31.55 | 17.99 |
| VIT_17s0000g04610.t01 | Wine grape | vacuole | 35.29 | 17.98 |
| CDY47729 | Canola | vacuole | 31.02 | 17.85 |
| KRH56734 | Soybean | vacuole | 32.62 | 17.84 |
| Bra015943.1-P | Field mustard | vacuole | 31.02 | 17.79 |
| CDX96507 | Canola | vacuole | 31.02 | 17.79 |
| Bra008124.1-P | Field mustard | vacuole | 30.48 | 17.54 |
| CDY66189 | Canola | vacuole | 27.81 | 17.51 |
| KRH03206 | Soybean | vacuole | 31.02 | 17.26 |
| CDY45863 | Canola | vacuole | 29.95 | 17.23 |
| Solyc03g114550.1.1 | Tomato | vacuole | 24.06 | 16.42 |
| TraesCS1B01G217600.1 | Wheat | extracellular, golgi, vacuole | 31.55 | 16.08 |
| TraesCS4B01G215300.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 33.69 | 15.25 |
| TraesCS2B01G196500.1 | Wheat | golgi, vacuole | 29.41 | 14.99 |
| VIT_17s0000g04590.t01 | Wine grape | endoplasmic reticulum, peroxisome, vacuole | 35.83 | 14.79 |
| TraesCS2B01G196600.1 | Wheat | golgi | 27.81 | 14.25 |
| VIT_17s0000g04580.t01 | Wine grape | extracellular, vacuole | 12.83 | 13.26 |
| Bra015944.1-P | Field mustard | vacuole | 31.02 | 9.72 |
| PGSC0003DMT400063282 | Potato | extracellular, vacuole | 6.95 | 8.39 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G559000.1 | EnsemblPlantsGene:TraesCS3B01G559000 | Gene3D:2.120.10.30 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016844 | InterPro:6-blade_b-propeller_TolB-like | InterPro:IPR011042 | InterPro:Strictosidine_synth_cons-reg |
| InterPro:Strictosidine_synthase | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF28 | PFAM:PF03088 | SUPFAM:SSF63829 | MapMan:50.4.3 |
Description
No Description!
Coordinates
chr3B:+:793045532..793046161
Molecular Weight (calculated)
20602.4 Da
IEP (calculated)
9.191
GRAVY (calculated)
-0.574
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVAPGGGEA TVLVNQVDGY PLRFTNGVDV DQVTGKVYFT DSSMNYQRSQ HEMVTRTGDS TGRLMSYDPR TSDVTLLQAG MTYPNGVALS GVNAGTSEPF
101: ADLPGYPDNV RPDTKGGYWV ALHREKNELP FGRDSHRLAV RVGNDGKIVE EMRGPKKVRP TEIMERSNGK IYFGSVELPY VGVVKRK
101: ADLPGYPDNV RPDTKGGYWV ALHREKNELP FGRDSHRLAV RVGNDGKIVE EMRGPKKVRP TEIMERSNGK IYFGSVELPY VGVVKRK
001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL
Arabidopsis Description
SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.