Factsheet for TraesCS3B01G338500.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G298200.1	Wheat	cytosol	87.46	94.64
TraesCS3D01G303900.1	Wheat	cytosol	86.88	93.12
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	88.92	81.55
TraesCS3B01G558800.1	Wheat	cytosol	46.36	76.08
TraesCS3B01G559000.1	Wheat	cytosol	41.11	75.4
TraesCS3B01G559100.1	Wheat	vacuole	72.59	72.17
TraesCS2B01G281700.1	Wheat	golgi, vacuole	66.47	66.28
TraesCS7B01G040400.1	Wheat	golgi, vacuole	65.89	64.94
TraesCS7B01G040900.1	Wheat	golgi, vacuole	65.89	64.94
TraesCS5B01G330900.1	Wheat	extracellular, vacuole	34.69	64.32
TraesCS3B01G289800.1	Wheat	vacuole	48.98	50.0
TraesCS2B01G092900.1	Wheat	golgi, vacuole	49.27	49.42
TraesCS2B01G093000.1	Wheat	golgi, vacuole	47.81	47.81
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	42.86	47.42
TraesCS5B01G195300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	47.81	47.4
TraesCS5B01G383000.1	Wheat	vacuole	46.65	47.2
TraesCS5B01G382800.1	Wheat	vacuole	45.77	46.04
TraesCS5B01G195400.1	Wheat	vacuole	48.69	45.88
GSMUA_Achr5P05340_001	Banana	vacuole	45.19	43.18
VIT_13s0074g00070.t01	Wine grape	vacuole	32.36	40.51
VIT_10s0042g00010.t01	Wine grape	vacuole	37.03	40.32
VIT_10s0071g00020.t01	Wine grape	vacuole	35.57	39.48
VIT_10s0042g00030.t01	Wine grape	vacuole	31.2	39.19
VIT_10s0042g00020.t01	Wine grape	vacuole	36.73	39.13
VIT_13s0074g00080.t01	Wine grape	vacuole	36.73	39.13
VIT_00s0575g00010.t01	Wine grape	vacuole	35.57	39.1
VIT_00s0575g00020.t01	Wine grape	vacuole	36.44	38.82
VIT_10s0042g00050.t01	Wine grape	vacuole	36.15	38.51
PGSC0003DMT400056839	Potato	vacuole	34.99	38.46
VIT_10s0071g00010.t01	Wine grape	vacuole	35.86	38.2
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	19.53	37.02
KRH07462	Soybean	vacuole	37.03	36.6
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	24.78	36.17
AT1G74010.1	Thale cress	vacuole	34.11	36.0
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	28.86	35.74
KRH03206	Soybean	vacuole	34.99	35.71
KRH56734	Soybean	vacuole	35.57	35.67
Solyc12g039070.1.1	Tomato	nucleus	34.4	35.44
KRH45407	Soybean	nucleus	35.57	34.96
PGSC0003DMT400063282	Potato	extracellular, vacuole	15.74	34.84
VIT_10s0071g00250.t01	Wine grape	vacuole	34.4	34.71
TraesCS5B01G133600.1	Wheat	extracellular, vacuole	37.03	33.96
Bra008127.1-P	Field mustard	vacuole	32.36	33.84
Solyc03g114560.2.1	Tomato	extracellular	32.07	33.64
CDY47728	Canola	vacuole	32.07	33.64
Bra008126.1-P	Field mustard	vacuole	32.07	33.64
CDX73038	Canola	vacuole	31.78	33.54
KRH54773	Soybean	vacuole	32.94	33.53
VIT_17s0000g04600.t01	Wine grape	vacuole	33.53	33.53
Bra003820.1-P	Field mustard	vacuole	31.49	33.44
AT1G74020.1	Thale cress	vacuole	32.65	33.43
CDY45861	Canola	vacuole	32.07	33.33
VIT_17s0000g04610.t01	Wine grape	vacuole	35.57	33.24
PGSC0003DMT400063286	Potato	vacuole	32.36	33.23
CDX96506	Canola	vacuole	31.49	33.23
AT1G74000.1	Thale cress	vacuole	31.78	33.13
Solyc03g114540.1.1	Tomato	vacuole	32.36	33.04
PGSC0003DMT400063274	Potato	vacuole	32.36	33.04
CDX96505	Canola	vacuole	31.49	32.93
CDY66188	Canola	vacuole	31.2	32.62
CDX68204	Canola	vacuole	31.2	32.62
CDX73037	Canola	vacuole	31.2	32.62
Bra008124.1-P	Field mustard	vacuole	30.9	32.62
CDY47729	Canola	vacuole	30.9	32.62
Solyc03g114550.1.1	Tomato	vacuole	25.95	32.48
CDY66189	Canola	vacuole	27.99	32.32
CDY45863	Canola	vacuole	30.61	32.31
PGSC0003DMT400063277	Potato	vacuole	31.2	32.23
CDX96507	Canola	vacuole	30.61	32.21
Bra015943.1-P	Field mustard	vacuole	30.61	32.21
TraesCS5B01G395100.1	Wheat	vacuole	37.32	32.08
Solyc03g114530.2.1	Tomato	vacuole	30.61	31.63
CDX73039	Canola	vacuole	30.03	31.6
TraesCS4B01G215300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	36.73	30.51
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	37.9	28.7
TraesCS1B01G217600.1	Wheat	extracellular, golgi, vacuole	30.32	28.34
KRH63133	Soybean	peroxisome, vacuole	14.29	28.32
TraesCS2B01G196500.1	Wheat	golgi, vacuole	27.99	26.16
TraesCS2B01G196600.1	Wheat	golgi	26.82	25.21
Bra015944.1-P	Field mustard	vacuole	30.32	17.42

Protein Annotations

EnsemblPlants:TraesCS3B01G338500.1	EnsemblPlantsGene:TraesCS3B01G338500	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF28	PFAM:PF03088	SignalP:SignalP-TM	SUPFAM:SSF63829
TMHMM:TMhelix	MapMan:50.4.3	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:544923627..544924658

Molecular Weight (calculated)

37337.5 Da

IEP (calculated)

7.603

GRAVY (calculated)

-0.301

Length

343 amino acids

Sequence
(BLAST)

001: MGCSMSRFVK ATVAVVLLVM IFMSGAMAAT SLDATRIQQL PLADGLLQGP ESVAFDAQGH GPYSGVSDGR ILRWDGDKTG WTTYAYGPGY DEDMCTASIF
101: RPATSMESQC GRPLGLQFHH KSGDLYVADA YRGLMRVGPG GGEATVLVNA VDDKPLRFTN GIDVDQVTGQ VYFTDSSMNY DRTRHEMVTR SGDSTGRLMR
201: YDPRTGDVAV LQTRLAYANG VAISTDRTHL IVASTGPCKL IRHWIEGAKA GTSEPFTDLP GYPDNVRPDR RGGYWVALHG EKNELPSRPN SHLLAVRVGA
301: DGKILEEMRG SKRVKPAEVV ERDNGKLYIG SIDLPYVGVI TRK

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.