Factsheet for PGSC0003DMT400056839

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 1
vacuole 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	vacuole
Plant-mPloc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	83.33	93.86
Solyc12g039070.1.1	Tomato	nucleus	91.03	85.29
PGSC0003DMT400063277	Potato	vacuole	58.33	54.82
PGSC0003DMT400063286	Potato	vacuole	56.73	52.99
PGSC0003DMT400063282	Potato	extracellular, vacuole	25.96	52.26
PGSC0003DMT400063274	Potato	vacuole	55.77	51.79
VIT_17s0000g04600.t01	Wine grape	vacuole	51.92	47.23
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	32.37	42.98
KRH54773	Soybean	vacuole	46.15	42.73
CDX73037	Canola	vacuole	44.23	42.07
Zm00001d029115_P001	Maize	extracellular, vacuole	31.41	41.88
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	41.35	41.61
CDX96505	Canola	vacuole	43.27	41.16
KRH63133	Soybean	peroxisome, vacuole	22.44	40.46
Bra008127.1-P	Field mustard	vacuole	41.99	39.94
KRH03206	Soybean	vacuole	42.63	39.58
HORVU2Hr1G013460.2	Barley	golgi, mitochondrion, vacuole	36.86	39.52
AT1G74010.1	Thale cress	vacuole	41.03	39.38
TraesCS3A01G298200.1	Wheat	cytosol	39.74	39.12
AT1G74020.1	Thale cress	vacuole	41.99	39.1
CDY47729	Canola	vacuole	40.71	39.08
CDX73039	Canola	vacuole	40.71	38.96
AT1G74000.1	Thale cress	vacuole	41.03	38.91
Bra008126.1-P	Field mustard	vacuole	40.71	38.84
CDY47728	Canola	vacuole	40.71	38.84
Bra008124.1-P	Field mustard	vacuole	40.38	38.77
CDY45863	Canola	vacuole	40.38	38.77
Bra015943.1-P	Field mustard	vacuole	40.38	38.65
CDX96507	Canola	vacuole	40.38	38.65
CDY45861	Canola	vacuole	40.38	38.18
CDX73038	Canola	vacuole	39.74	38.15
TraesCS3D01G303900.1	Wheat	cytosol	39.1	38.12
KRH56734	Soybean	vacuole	41.67	38.01
CDX96506	Canola	vacuole	39.42	37.85
Zm00001d029117_P001	Maize	vacuole	40.71	37.57
HORVU6Hr1G026020.1	Barley	cytosol	29.81	37.5
TraesCS3B01G559000.1	Wheat	cytosol	22.44	37.43
Zm00001d029111_P001	Maize	vacuole	40.38	37.28
TraesCS2A01G078000.1	Wheat	vacuole	40.71	37.03
TraesCS2B01G093000.1	Wheat	golgi, vacuole	40.71	37.03
OQU75879	Sorghum	vacuole	36.22	36.93
Zm00001d029108_P001	Maize	vacuole	37.5	36.91
TraesCS2D01G076000.1	Wheat	golgi, vacuole	40.38	36.73
Zm00001d020306_P001	Maize	endoplasmic reticulum, vacuole	40.06	36.44
KXG39404	Sorghum	golgi, vacuole	39.74	36.36
TraesCS3B01G558800.1	Wheat	cytosol	24.36	36.36
HORVU2Hr1G012970.2	Barley	mitochondrion	40.71	36.29
PGSC0003DMT400044684	Potato	vacuole	40.71	36.29
TraesCS2B01G092900.1	Wheat	golgi, vacuole	39.74	36.26
EES01763	Sorghum	vacuole	40.06	36.23
Bra003820.1-P	Field mustard	vacuole	37.5	36.22
HORVU2Hr1G064060.1	Barley	mitochondrion, vacuole	29.49	36.22
GSMUA_Achr5P05340_001	Banana	vacuole	41.67	36.21
TraesCS2D01G076200.1	Wheat	vacuole	39.74	36.15
EES01841	Sorghum	vacuole	40.06	36.02
CDY66188	Canola	vacuole	37.82	35.98
Zm00001d012249_P001	Maize	vacuole	39.74	35.94
TraesCS2D01G076400.1	Wheat	vacuole	39.42	35.86
TraesCSU01G189700.1	Wheat	vacuole	39.42	35.86
TraesCS5B01G195300.1	Wheat	endoplasmic reticulum, extracellular, vacuole	39.74	35.84
EER96671	Sorghum	endoplasmic reticulum, golgi	40.06	35.71
TraesCS5D01G202700.1	Wheat	vacuole	39.42	35.55
PGSC0003DMT400076777	Potato	vacuole	42.31	35.48
TraesCS7A01G138300.1	Wheat	cytosol	23.72	35.41
TraesCS7A01G138700.1	Wheat	cytosol	23.72	35.41
Zm00001d020308_P001	Maize	cytosol, plastid, vacuole	18.27	35.4
CDX68204	Canola	vacuole	37.18	35.37
Zm00001d012252_P001	Maize	vacuole	39.1	35.36
Zm00001d012366_P001	Maize	vacuole	39.1	35.36
Zm00001d012368_P001	Maize	golgi, vacuole	39.1	35.36
Zm00001d012371_P001	Maize	golgi, vacuole	39.1	35.36
Zm00001d012377_P001	Maize	vacuole	39.1	35.36
CDY66189	Canola	vacuole	33.65	35.35
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	39.1	35.26
TraesCS2D01G076300.1	Wheat	vacuole	39.1	35.26
TraesCS5B01G195400.1	Wheat	vacuole	41.03	35.16
TraesCS3D01G503900.1	Wheat	nucleus	34.94	35.05
TraesCS3B01G338500.1	Wheat	extracellular, golgi, vacuole	38.46	34.99
Zm00001d012363_P001	Maize	endoplasmic reticulum, extracellular	16.35	34.93
Os07t0543600-00	Rice	golgi, vacuole	39.1	34.86
TraesCS5A01G188200.1	Wheat	vacuole	40.38	34.71
OQU76676	Sorghum	extracellular, golgi, vacuole	38.46	34.68
Zm00001d012375_P001	Maize	vacuole	37.18	34.63
TraesCS7D01G076300.1	Wheat	vacuole	40.06	34.63
TraesCS5D01G202800.1	Wheat	golgi, vacuole	40.38	34.62
TraesCS3B01G559100.1	Wheat	vacuole	38.14	34.49
Os01t0698200-00	Rice	mitochondrion	32.05	34.48
PGSC0003DMT400044531	Potato	vacuole	41.03	34.32
TraesCS2B01G281700.1	Wheat	golgi, vacuole	37.82	34.3
OQU79673	Sorghum	vacuole	37.5	34.21
TraesCS3A01G496700.1	Wheat	golgi, vacuole	37.82	34.2
HORVU3Hr1G065520.3	Barley	extracellular	35.26	34.16
HORVU5Hr1G058940.2	Barley	vacuole	40.06	34.06
Os06t0623700-01	Rice	golgi, vacuole	38.14	34.0
TraesCS7D01G076600.1	Wheat	cytosol	22.76	33.97
TraesCS3A01G256600.1	Wheat	vacuole	36.54	33.93
TraesCS3B01G289800.1	Wheat	vacuole	36.54	33.93
TraesCS5B01G383000.1	Wheat	vacuole	36.86	33.92
TraesCS7D01G140500.1	Wheat	golgi, vacuole	37.5	33.91
TraesCS7B01G040900.1	Wheat	golgi, vacuole	37.82	33.91
OQU87434	Sorghum	golgi, vacuole	38.46	33.9
TraesCSU01G240600.1	Wheat	cytosol	20.51	33.86
TraesCSU01G255900.1	Wheat	cytosol	20.51	33.86
EES07680	Sorghum	golgi, vacuole	37.5	33.81
TraesCS5B01G382800.1	Wheat	vacuole	36.86	33.72
HORVU7Hr1G028550.2	Barley	plastid	19.23	33.71
Os08t0175000-00	Rice	golgi, mitochondrion, vacuole	38.46	33.71
HORVU5Hr1G093840.1	Barley	vacuole	36.54	33.63
TraesCS3D01G504000.1	Wheat	vacuole	37.18	33.62
EES17427	Sorghum	golgi, vacuole	36.86	33.53
EER90208	Sorghum	vacuole	37.18	33.53
EES05895	Sorghum	golgi, vacuole	37.18	33.53
TraesCS7A01G138800.1	Wheat	golgi, vacuole	32.69	33.44
TraesCS7D01G076000.1	Wheat	vacuole	36.54	33.43
Os08t0442200-01	Rice	extracellular	37.5	33.43
TraesCS3A01G496900.1	Wheat	vacuole	37.5	33.43
EER96672	Sorghum	vacuole	39.1	33.33
TraesCS1A01G026500.1	Wheat	vacuole	36.86	33.33
TraesCS7B01G040400.1	Wheat	golgi, vacuole	37.18	33.33
TraesCS7D01G139900.1	Wheat	vacuole	37.18	33.33
TraesCSU01G104000.1	Wheat	golgi, vacuole	37.18	33.33
TraesCSU01G223800.1	Wheat	vacuole	36.86	33.33
OQU85880	Sorghum	golgi, vacuole	36.86	33.24
TraesCS7D01G076500.1	Wheat	cytosol	20.19	33.16
EES05427	Sorghum	vacuole	36.54	33.14
TraesCS7D01G075900.1	Wheat	vacuole	36.54	33.04
Zm00001d020307_P001	Maize	endoplasmic reticulum, vacuole	21.79	33.01
HORVU3Hr1G109810.1	Barley	golgi, vacuole	36.86	32.95
TraesCS1A01G437900.1	Wheat	cytosol	19.55	32.8
TraesCS7D01G140000.1	Wheat	golgi, vacuole	36.54	32.76
PGSC0003DMT400007661	Potato	vacuole	39.42	32.45
HORVU7Hr1G028580.1	Barley	golgi, vacuole	36.54	32.39
PGSC0003DMT400048627	Potato	cytosol, golgi, mitochondrion, vacuole	35.26	32.26
TraesCS7D01G140600.1	Wheat	endoplasmic reticulum, plasma membrane	31.73	32.25
TraesCS5A01G188300.1	Wheat	extracellular, plasma membrane, vacuole	38.78	32.1
TraesCS5B01G330900.1	Wheat	extracellular, vacuole	18.91	31.89
TraesCS5D01G389100.1	Wheat	plastid, vacuole	36.22	31.83
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	38.14	31.82
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	36.22	31.74
TraesCS3D01G256900.1	Wheat	mitochondrion, plastid	36.22	31.65
HORVU5Hr1G078340.1	Barley	golgi, vacuole	24.68	31.56
Os09t0374900-00	Rice	cytosol, golgi, plastid, vacuole	38.46	31.41
PGSC0003DMT400044685	Potato	extracellular	26.92	31.23
TraesCS2A01G260200.1	Wheat	mitochondrion, vacuole	34.62	31.21
HORVU5Hr1G009400.2	Barley	cytosol, mitochondrion, plastid, vacuole	13.46	30.88
PGSC0003DMT400015199	Potato	vacuole	38.14	30.43
EES17425	Sorghum	extracellular	24.36	29.01
PGSC0003DMT400007732	Potato	vacuole	36.22	28.9
PGSC0003DMT400030927	Potato	golgi, plasma membrane, vacuole	35.26	27.03
HORVU4Hr1G016850.1	Barley	cytosol	14.1	25.29
PGSC0003DMT400005990	Potato	cytosol	21.47	23.18
PGSC0003DMT400003995	Potato	golgi, vacuole	25.32	21.12
Zm00001d012373_P001	Maize	vacuole	38.78	20.58
Bra015944.1-P	Field mustard	vacuole	38.78	20.27

Protein Annotations

EnsemblPlants:PGSC0003DMT400056839	EnsemblPlantsGene:PGSC0003DMG400022109	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF57	PFAM:PF03088	PGSC:PGSC0003DMG400022109	SEG:seg
SUPFAM:SSF63829	UniParc:UPI0002951604	UniProt:M1BZY6	MapMan:50.4.3	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400022109]

Coordinates

chr12:+:27052037..27055035

Molecular Weight (calculated)

34073.1 Da

IEP (calculated)

9.124

GRAVY (calculated)

0.047

Length

312 amino acids

Sequence
(BLAST)

001: MVMEPLLPLK KLQLPSGTVG PEAIAFDILG NGPYTSVADG RVLKYQGPRI GFTDFATTSP LRTKEVCDGK NDPNLLIKCG RPLGLGFYYR SGDLYIADIN
101: YGLLVVGRNG GPARQLVTGI DGNPFAFTNA VDIDQLNGVV YFTDSGSIFR ATSNITLLLE SKDTTGRLFK YDIRTNQVTL LLSGLAGPAG VAVSLDGSYV
201: LVTELIANRI KRFWIRGRKA NTAEVFTNLN GYPDNIKRTI LGDYFVAVNI VNNQSMTPPK FSFAQRINVL GNVMVSLILS AQYRDSISEV QEQFGRLYIG
301: SLKEDFVGVY GV

Best Arabidopsis Sequence Match ( AT1G74000.1 )
(BLAST)

001: MMRSFVSLIS LLLLLSFSSS VLSTKKSSFQ KLPVPGNRTG PEAFAFDSTG KGFYTGVTGG KILKYLPKKG YVDFAQITNS SKSSLCDGAL GTTNVEKCGR
101: PAGIAFNTKT GDLYVADAAL GLHVIPRRGG LAKKIADSVG GKPFLFLDGL DVDPTTGVVY FTSFSSTFGP RDVLKAVATK DSTGKFFKYD PSKKVVTVLM
201: EGLSGSAGCA VSSDGSFVLV GQFTKSNIKR YWIKGSKAGT SEDFTNSVSN PDNIKRIGST GNFWVASVVN SATGPTNPSA VKVSSAGKVL QTIPLKDKFG
301: DTLVSEVNEY KGQLYIGALF GPFAGILKL

Arabidopsis Description

SSL11Protein STRICTOSIDINE SYNTHASE-LIKE 11 [Source:UniProtKB/Swiss-Prot;Acc:P92976]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.