Factsheet for TraesCSU01G104000.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G138800.1	Wheat	golgi, vacuole	81.9	93.44
HORVU7Hr1G028580.1	Barley	golgi, vacuole	91.09	90.06
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	87.36	85.39
TraesCSU01G240600.1	Wheat	cytosol	39.66	73.02
TraesCSU01G255900.1	Wheat	cytosol	39.66	73.02
EES07680	Sorghum	golgi, vacuole	70.4	70.81
EES05895	Sorghum	golgi, vacuole	70.11	70.52
EER90208	Sorghum	vacuole	70.11	70.52
OQU85880	Sorghum	golgi, vacuole	69.83	70.23
EES05427	Sorghum	vacuole	69.25	70.06
TraesCSU01G223800.1	Wheat	vacuole	68.1	68.7
Os07t0543600-00	Rice	golgi, vacuole	63.51	63.14
TraesCSU01G189700.1	Wheat	vacuole	47.99	48.69
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	40.8	45.81
GSMUA_Achr5P05340_001	Banana	vacuole	43.39	42.06
PGSC0003DMT400063282	Potato	extracellular, vacuole	17.24	38.71
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	20.11	38.67
VIT_13s0074g00070.t01	Wine grape	vacuole	30.17	38.32
VIT_10s0042g00010.t01	Wine grape	vacuole	34.2	37.78
PGSC0003DMT400056839	Potato	vacuole	33.33	37.18
VIT_10s0042g00030.t01	Wine grape	vacuole	29.02	37.0
VIT_00s0575g00020.t01	Wine grape	vacuole	34.2	36.96
VIT_13s0074g00080.t01	Wine grape	vacuole	34.2	36.96
VIT_00s0575g00010.t01	Wine grape	vacuole	33.05	36.86
KRH07462	Soybean	vacuole	36.49	36.6
VIT_10s0071g00020.t01	Wine grape	vacuole	32.47	36.57
VIT_10s0042g00020.t01	Wine grape	vacuole	33.62	36.34
VIT_10s0042g00050.t01	Wine grape	vacuole	33.62	36.34
VIT_10s0071g00010.t01	Wine grape	vacuole	33.33	36.02
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	27.87	35.02
VIT_17s0000g04600.t01	Wine grape	vacuole	34.2	34.69
KRH45407	Soybean	nucleus	34.77	34.67
VIT_10s0071g00250.t01	Wine grape	vacuole	33.62	34.41
Solyc03g114560.2.1	Tomato	extracellular	32.18	34.25
Solyc12g039070.1.1	Tomato	nucleus	32.76	34.23
AT1G74010.1	Thale cress	vacuole	31.03	33.23
Solyc03g114550.1.1	Tomato	vacuole	26.15	33.21
PGSC0003DMT400063277	Potato	vacuole	31.61	33.13
CDX73037	Canola	vacuole	31.03	32.93
Bra003820.1-P	Field mustard	vacuole	30.46	32.82
PGSC0003DMT400063274	Potato	vacuole	31.61	32.74
CDX96505	Canola	vacuole	30.75	32.62
KRH03206	Soybean	vacuole	31.32	32.44
Solyc03g114540.1.1	Tomato	vacuole	31.32	32.44
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	21.84	32.34
PGSC0003DMT400063286	Potato	vacuole	31.03	32.34
CDY66189	Canola	vacuole	27.59	32.32
CDY47728	Canola	vacuole	30.17	32.11
Solyc03g114530.2.1	Tomato	vacuole	30.46	31.93
KRH56734	Soybean	vacuole	31.32	31.87
Bra008126.1-P	Field mustard	vacuole	29.89	31.8
CDY45861	Canola	vacuole	29.89	31.52
KRH54773	Soybean	vacuole	30.46	31.45
Bra008127.1-P	Field mustard	vacuole	29.6	31.4
VIT_17s0000g04610.t01	Wine grape	vacuole	33.05	31.34
AT1G74020.1	Thale cress	vacuole	29.89	31.04
CDX96507	Canola	vacuole	29.02	30.98
Bra015943.1-P	Field mustard	vacuole	29.02	30.98
CDX68204	Canola	vacuole	29.02	30.79
CDY47729	Canola	vacuole	28.74	30.77
CDX73039	Canola	vacuole	28.74	30.67
CDY66188	Canola	vacuole	28.74	30.49
Bra008124.1-P	Field mustard	vacuole	28.45	30.46
AT1G74000.1	Thale cress	vacuole	28.74	30.4
CDY45863	Canola	vacuole	28.16	30.15
CDX73038	Canola	vacuole	27.87	29.85
CDX96506	Canola	vacuole	27.87	29.85
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	34.77	26.71
KRH63133	Soybean	peroxisome, vacuole	12.64	25.43
Bra015944.1-P	Field mustard	vacuole	27.01	15.75

Protein Annotations

EnsemblPlants:TraesCSU01G104000.1	EnsemblPlantsGene:TraesCSU01G104000	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF28	PFAM:PF03088	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF63829	TMHMM:TMhelix	MapMan:50.4.3	:	:	:

Description

No Description!

Coordinates

chrUn:+:91490467..91491513

Molecular Weight (calculated)

37761.3 Da

IEP (calculated)

9.305

GRAVY (calculated)

-0.196

Length

348 amino acids

Sequence
(BLAST)

001: MASGRRDLAA ATITLAVLLV LFLPITAAAA AAAVPSIDAT RTRHLPLRHG LLRGPESVAF DAKGNGPYSG VSDGRVLKWN GDALGWTTYT YGPDYSSEAC
101: TASLLRPETA TEGHCGRPLG LRFHLKSGYL YVADAYKGLM RVAPGGGEAT VLVTEVDGVP LRFTNGVDID QVTGEVYFTD SSRNYNRSQH EMVTRTGDST
201: GRLVRYDPRT GKAVVLQADI TYPNGFAISA DRTHLIISST GPCKLLRYWI KGSKAGTMEL FADLPGYPDN VRPDKKGGYW VALHREKAEL PFGVDSHLLA
301: LRIDAEGNII EEMRGPKSVR PTEVVERKGG KLFMGSVELT YMAVVKRK

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.