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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 8
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER90208 Sorghum vacuole 94.77 94.22
EES07680 Sorghum golgi, vacuole 94.77 94.22
EES05895 Sorghum golgi, vacuole 94.48 93.93
OQU85880 Sorghum golgi, vacuole 94.19 93.64
TraesCS7A01G138300.1 Wheat cytosol 45.35 74.64
TraesCS7A01G138700.1 Wheat cytosol 45.06 74.16
TraesCS7D01G076600.1 Wheat cytosol 43.9 72.25
TraesCSU01G240600.1 Wheat cytosol 39.53 71.96
TraesCSU01G255900.1 Wheat cytosol 39.53 71.96
TraesCS7D01G076500.1 Wheat cytosol 38.95 70.53
TraesCS7D01G140500.1 Wheat golgi, vacuole 70.06 69.86
TraesCSU01G104000.1 Wheat golgi, vacuole 70.06 69.25
TraesCS3D01G503900.1 Wheat nucleus 62.5 69.13
TraesCS7A01G138800.1 Wheat golgi, vacuole 61.05 68.85
TraesCS7D01G139900.1 Wheat vacuole 69.48 68.68
TraesCS7D01G140000.1 Wheat golgi, vacuole 69.19 68.39
TraesCS7D01G140600.1 Wheat endoplasmic reticulum, plasma membrane 60.47 67.75
TraesCS3D01G504000.1 Wheat vacuole 67.73 67.54
TraesCS3A01G298200.1 Wheat cytosol 61.92 67.19
TraesCS3A01G496700.1 Wheat golgi, vacuole 67.15 66.96
TraesCS3D01G303900.1 Wheat cytosol 61.92 66.56
OQU76676 Sorghum extracellular, golgi, vacuole 66.86 66.47
Os07t0543600-00 Rice golgi, vacuole 67.15 66.0
TraesCS3A01G496900.1 Wheat vacuole 66.86 65.71
TraesCS7D01G075900.1 Wheat vacuole 65.41 65.22
TraesCS1A01G026500.1 Wheat vacuole 64.83 64.64
TraesCSU01G223800.1 Wheat vacuole 64.83 64.64
TraesCS5B01G330900.1 Wheat extracellular, vacuole 34.59 64.32
TraesCS7D01G076000.1 Wheat vacuole 63.66 64.22
TraesCS1A01G437900.1 Wheat cytosol 34.3 63.44
TraesCS2A01G260200.1 Wheat mitochondrion, vacuole 60.17 59.83
OQU75879 Sorghum vacuole 46.51 52.29
KXG39404 Sorghum golgi, vacuole 50.87 51.32
EES01763 Sorghum vacuole 50.58 50.43
EES01841 Sorghum vacuole 50.87 50.43
OQU79673 Sorghum vacuole 49.13 49.42
EES17427 Sorghum golgi, vacuole 48.55 48.69
OQU87434 Sorghum golgi, vacuole 50.0 48.59
GSMUA_Achr3P06240_001 Banana cytosol, mitochondrion, peroxisome, vacuole 43.31 48.06
EER96671 Sorghum endoplasmic reticulum, golgi 47.38 46.57
EER96672 Sorghum vacuole 47.38 44.54
GSMUA_Achr5P05340_001 Banana vacuole 45.35 43.45
EES17425 Sorghum extracellular 31.4 41.22
VIT_13s0074g00070.t01 Wine grape vacuole 31.98 40.15
VIT_10s0042g00010.t01 Wine grape vacuole 36.05 39.37
VIT_17s0000g04580.t01 Wine grape extracellular, vacuole 20.35 38.67
VIT_13s0074g00080.t01 Wine grape vacuole 35.76 38.2
VIT_00s0575g00010.t01 Wine grape vacuole 34.3 37.82
VIT_10s0042g00030.t01 Wine grape vacuole 29.94 37.73
VIT_10s0071g00020.t01 Wine grape vacuole 33.72 37.54
VIT_10s0042g00020.t01 Wine grape vacuole 34.88 37.27
VIT_10s0042g00050.t01 Wine grape vacuole 34.88 37.27
VIT_17s0000g04600.t01 Wine grape vacuole 36.92 37.03
Bra008125.1-P Field mustard cytosol, peroxisome, vacuole 25.29 37.02
VIT_00s0575g00020.t01 Wine grape vacuole 34.59 36.96
VIT_10s0071g00010.t01 Wine grape vacuole 34.59 36.96
PGSC0003DMT400056839 Potato vacuole 33.14 36.54
KRH07462 Soybean vacuole 36.34 36.02
VIT_10s0071g00250.t01 Wine grape vacuole 34.88 35.29
CDX96505 Canola vacuole 33.43 35.06
KRH45407 Soybean nucleus 35.47 34.96
AT1G74010.1 Thale cress vacuole 32.85 34.77
CDX73037 Canola vacuole 33.14 34.76
EER90869 Sorghum vacuole 40.12 34.67
KRH03206 Soybean vacuole 33.43 34.23
PGSC0003DMT400063282 Potato extracellular, vacuole 15.41 34.19
KRH54773 Soybean vacuole 33.43 34.12
CDY47729 Canola vacuole 31.98 33.85
KRH56734 Soybean vacuole 33.43 33.63
Bra008124.1-P Field mustard vacuole 31.69 33.54
Bra003820.1-P Field mustard vacuole 31.4 33.44
EES07950 Sorghum vacuole 38.08 33.42
KXG27696 Sorghum vacuole 37.79 33.33
CDX96506 Canola vacuole 31.4 33.23
CDY45863 Canola vacuole 31.4 33.23
PGSC0003DMT400001736 Potato cytosol, peroxisome, vacuole 26.74 33.21
Solyc03g114550.1.1 Tomato vacuole 26.45 33.21
AT1G74000.1 Thale cress vacuole 31.69 33.13
Bra008126.1-P Field mustard vacuole 31.4 33.03
CDY47728 Canola vacuole 31.4 33.03
CDX73038 Canola vacuole 31.1 32.92
PGSC0003DMT400063277 Potato vacuole 31.69 32.83
Bra015943.1-P Field mustard vacuole 31.1 32.82
CDX96507 Canola vacuole 31.1 32.82
Solyc12g039070.1.1 Tomato nucleus 31.69 32.73
VIT_17s0000g04610.t01 Wine grape vacuole 34.88 32.7
CDY66189 Canola vacuole 28.2 32.66
Bra008127.1-P Field mustard vacuole 31.1 32.62
CDX68204 Canola vacuole 31.1 32.62
Solyc03g114530.2.1 Tomato vacuole 31.4 32.53
Solyc03g114560.2.1 Tomato extracellular 30.81 32.42
CDX73039 Canola vacuole 30.52 32.21
CDY45861 Canola vacuole 30.81 32.12
EER92507 Sorghum cytosol, golgi, mitochondrion, vacuole 38.37 32.04
CDY66188 Canola vacuole 30.52 32.01
AT1G74020.1 Thale cress vacuole 30.81 31.64
PGSC0003DMT400063274 Potato vacuole 30.81 31.55
Solyc03g114540.1.1 Tomato vacuole 30.81 31.55
PGSC0003DMT400063286 Potato vacuole 30.52 31.44
KRH63133 Soybean peroxisome, vacuole 14.24 28.32
VIT_17s0000g04590.t01 Wine grape endoplasmic reticulum, peroxisome, vacuole 37.21 28.26
HORVU4Hr1G016850.1 Barley cytosol 14.24 28.16
KXG36678 Sorghum vacuole 26.45 24.73
KXG36676 Sorghum vacuole 25.29 24.17
OQU92210 Sorghum golgi, plastid, vacuole 27.91 21.67
Bra015944.1-P Field mustard vacuole 30.52 17.59
Protein Annotations
Gene3D:2.120.10.30MapMan:50.4.3InterPro:6-blade_b-propeller_TolB-likeEntrezGene:8059687UniProt:C5XXN9EnsemblPlants:EES05427
ProteinID:EES05427ProteinID:EES05427.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005783GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0016020GO:GO:0016787GO:GO:0016788GO:GO:0016844InterPro:IPR011042PFAM:PF03088
PANTHER:PTHR10426PANTHER:PTHR10426:SF28EnsemblPlantsGene:SORBI_3004G215400SUPFAM:SSF63829SignalP:SignalP-noTMInterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthaseUniParc:UPI0001A85342RefSeq:XP_002452451.1SEG:seg::
Description
hypothetical protein
Coordinates
chr4:+:56536262..56537411
Molecular Weight (calculated)
36677.0 Da
IEP (calculated)
9.069
GRAVY (calculated)
-0.108
Length
344 amino acids
Sequence
(BLAST)
001: MAIKLARALA IWCLAVLLLL LPCTARPISE TSTIDGSRSK HLPLRGSLLR GPESVAFDGA GAGPYSGVSD GRVLKWNGFA RGWSTYAYGP GYDAAACTAS
101: RARPAELTES KCGRPLGLRF HHASGNLYIA DAYKGLMRVG PGGGEATVLA AEADGVPLRF TNGVDVDQVT GDVFFTDSSM NYPRSQHERV TATGDSSGRI
201: MKYDPKTGQV RVLLAGVTYP NGLAISADRT HLVVALTGPC KLLRYWIEGP KAGTAEHLAD LPGYPDNVRA DGRGGFWVAL HREKMELPFG PDSHLLAVRV
301: GADGQVVQVM RGPKSVRPTE VVERGGGKLY MGSVELPYVA VVRE
Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)
001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP
Arabidopsis Description
SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.