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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, vacuole

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES01763 Sorghum vacuole 85.31 87.54
EES01841 Sorghum vacuole 85.31 87.03
Zm00001d012252_P001 Maize vacuole 84.18 86.38
Zm00001d012249_P001 Maize vacuole 84.18 86.38
KXG39404 Sorghum golgi, vacuole 73.73 76.54
OQU75879 Sorghum vacuole 64.12 74.18
OQU79673 Sorghum vacuole 56.21 58.19
EES17427 Sorghum golgi, vacuole 52.82 54.52
EES05895 Sorghum golgi, vacuole 49.15 50.29
EER90208 Sorghum vacuole 49.15 50.29
EES07680 Sorghum golgi, vacuole 48.87 50.0
EES05427 Sorghum vacuole 48.59 50.0
OQU85880 Sorghum golgi, vacuole 48.59 49.71
OQU76676 Sorghum extracellular, golgi, vacuole 48.59 49.71
EER96671 Sorghum endoplasmic reticulum, golgi 48.59 49.14
GSMUA_Achr3P06240_001 Banana cytosol, mitochondrion, peroxisome, vacuole 42.66 48.71
EES17425 Sorghum extracellular 35.59 48.09
EER96672 Sorghum vacuole 47.18 45.63
GSMUA_Achr5P05340_001 Banana vacuole 45.2 44.57
VIT_10s0042g00010.t01 Wine grape vacuole 39.27 44.13
VIT_13s0074g00070.t01 Wine grape vacuole 33.62 43.43
VIT_10s0071g00020.t01 Wine grape vacuole 37.29 42.72
VIT_00s0575g00010.t01 Wine grape vacuole 37.57 42.63
VIT_10s0042g00020.t01 Wine grape vacuole 38.14 41.93
VIT_13s0074g00080.t01 Wine grape vacuole 38.14 41.93
VIT_10s0042g00050.t01 Wine grape vacuole 37.85 41.61
VIT_00s0575g00020.t01 Wine grape vacuole 37.85 41.61
VIT_17s0000g04580.t01 Wine grape extracellular, vacuole 20.9 40.88
VIT_10s0071g00010.t01 Wine grape vacuole 37.01 40.68
VIT_10s0071g00250.t01 Wine grape vacuole 38.7 40.29
VIT_10s0042g00030.t01 Wine grape vacuole 31.07 40.29
KRH07462 Soybean vacuole 38.7 39.48
VIT_17s0000g04600.t01 Wine grape vacuole 37.57 38.78
PGSC0003DMT400063282 Potato extracellular, vacuole 16.95 38.71
KRH45407 Soybean nucleus 38.14 38.68
PGSC0003DMT400056839 Potato vacuole 33.9 38.46
CDX73037 Canola vacuole 34.18 36.89
AT1G74010.1 Thale cress vacuole 33.33 36.31
Bra008125.1-P Field mustard cytosol, peroxisome, vacuole 24.01 36.17
Solyc03g114550.1.1 Tomato vacuole 27.97 36.13
PGSC0003DMT400001736 Potato cytosol, peroxisome, vacuole 28.25 36.1
Solyc12g039070.1.1 Tomato nucleus 33.62 35.74
CDX96505 Canola vacuole 33.05 35.67
Bra003820.1-P Field mustard vacuole 31.92 34.98
Solyc03g114560.2.1 Tomato extracellular 32.2 34.86
Bra008126.1-P Field mustard vacuole 32.2 34.86
CDY47728 Canola vacuole 32.2 34.86
Bra008127.1-P Field mustard vacuole 31.92 34.45
EER90869 Sorghum vacuole 38.7 34.42
KRH54773 Soybean vacuole 32.77 34.42
Bra015943.1-P Field mustard vacuole 31.64 34.36
CDX96507 Canola vacuole 31.64 34.36
CDY45861 Canola vacuole 31.92 34.24
KRH03206 Soybean vacuole 32.49 34.23
CDY47729 Canola vacuole 31.36 34.15
AT1G74000.1 Thale cress vacuole 31.64 34.04
Bra008124.1-P Field mustard vacuole 31.07 33.85
CDY66188 Canola vacuole 31.36 33.84
CDX73039 Canola vacuole 31.07 33.74
PGSC0003DMT400063277 Potato vacuole 31.64 33.73
CDY45863 Canola vacuole 30.79 33.54
CDX68204 Canola vacuole 31.07 33.54
Solyc03g114530.2.1 Tomato vacuole 31.36 33.43
AT1G74020.1 Thale cress vacuole 31.64 33.43
PGSC0003DMT400063274 Potato vacuole 31.64 33.33
KRH56734 Soybean vacuole 32.2 33.33
CDX96506 Canola vacuole 30.51 33.23
Solyc03g114540.1.1 Tomato vacuole 31.36 33.04
PGSC0003DMT400063286 Potato vacuole 31.07 32.93
CDX73038 Canola vacuole 30.23 32.92
EES07950 Sorghum vacuole 36.44 32.91
KXG27696 Sorghum vacuole 36.16 32.82
CDY66189 Canola vacuole 27.4 32.66
EER92507 Sorghum cytosol, golgi, mitochondrion, vacuole 37.57 32.28
VIT_17s0000g04610.t01 Wine grape vacuole 33.33 32.15
KRH63133 Soybean peroxisome, vacuole 14.69 30.06
VIT_17s0000g04590.t01 Wine grape endoplasmic reticulum, peroxisome, vacuole 38.14 29.8
KXG36676 Sorghum vacuole 24.86 24.44
KXG36678 Sorghum vacuole 23.73 22.83
OQU92210 Sorghum golgi, plastid, vacuole 27.4 21.9
Bra015944.1-P Field mustard vacuole 29.38 17.42
Protein Annotations
Gene3D:2.120.10.30MapMan:50.4.3InterPro:6-blade_b-propeller_TolB-likeEntrezGene:8059192UniProt:A0A1W0VZ88GO:GO:0003674
GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0016844InterPro:IPR011042
EnsemblPlants:OQU87434ProteinID:OQU87434ProteinID:OQU87434.1PFAM:PF03088PANTHER:PTHR10426PANTHER:PTHR10426:SF56
EnsemblPlantsGene:SORBI_3003G278900SUPFAM:SSF63829SignalP:SignalP-noTMInterPro:Strictosidine_synth_cons-regInterPro:Strictosidine_synthaseTMHMM:TMhelix
UniParc:UPI0009DC84D8SEG:seg::::
Description
hypothetical protein
Coordinates
chr3:+:61486662..61488704
Molecular Weight (calculated)
37857.1 Da
IEP (calculated)
8.119
GRAVY (calculated)
-0.074
Length
354 amino acids
Sequence
(BLAST)
001: MRRRQVNLAT WLLAAAVVVL ALFATPGAAA AQVKTTDTRW SFHLPLPGGV SGAESLAFDG KGEGPYAGVS DGRVLKWGGS AVGWTTFAHS ANYRKIPLCT
101: AGVVPSAETE SMCGRPLGLQ FHFKTGDVYI ADAYLGLMKV GPGGGEAEVL ATGAGGVPFN FVNGLDVHQA TGDVYFTDSS STYPRRFNTE IMMNADATGR
201: LLKYDAKTKS VTVLKAGLPY PNGVAVSRDG AQVVVAHTVP CQAFRYFLRG ARAGQYELLA DLPGYPDNVR RDGKGGYWVA LNQEKQRLDV TPATAPAKHL
301: VGVRLDNQGV EVEELTAAKG VTLSDVAERR GKLWLGSVEL EPQFSCHWFC QCDL
Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)
001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL
Arabidopsis Description
SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.