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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU79673 Sorghum vacuole 80.53 61.7
EES17427 Sorghum golgi, vacuole 62.98 48.1
KXG39404 Sorghum golgi, vacuole 51.91 39.88
OQU75879 Sorghum vacuole 46.18 39.54
EES01763 Sorghum vacuole 48.09 36.52
EES01841 Sorghum vacuole 47.33 35.73
OQU87434 Sorghum golgi, vacuole 48.09 35.59
EES07680 Sorghum golgi, vacuole 43.13 32.66
EER90208 Sorghum vacuole 42.75 32.37
EES05895 Sorghum golgi, vacuole 42.75 32.37
OQU85880 Sorghum golgi, vacuole 42.37 32.08
EES05427 Sorghum vacuole 41.22 31.4
VIT_17s0000g04580.t01 Wine grape extracellular, vacuole 20.99 30.39
PGSC0003DMT400063282 Potato extracellular, vacuole 17.56 29.68
GSMUA_Achr3P06240_001 Banana cytosol, mitochondrion, peroxisome, vacuole 35.11 29.68
OQU76676 Sorghum extracellular, golgi, vacuole 38.55 29.19
VIT_13s0074g00070.t01 Wine grape vacuole 30.15 28.83
VIT_10s0071g00020.t01 Wine grape vacuole 33.97 28.8
VIT_10s0042g00010.t01 Wine grape vacuole 33.97 28.25
VIT_00s0575g00010.t01 Wine grape vacuole 33.59 28.21
VIT_10s0042g00030.t01 Wine grape vacuole 29.01 27.84
VIT_10s0042g00020.t01 Wine grape vacuole 33.97 27.64
VIT_13s0074g00080.t01 Wine grape vacuole 33.59 27.33
VIT_10s0042g00050.t01 Wine grape vacuole 33.59 27.33
EER96671 Sorghum endoplasmic reticulum, golgi 36.26 27.14
VIT_10s0071g00250.t01 Wine grape vacuole 35.11 27.06
VIT_00s0575g00020.t01 Wine grape vacuole 33.21 27.02
VIT_10s0071g00010.t01 Wine grape vacuole 32.82 26.71
VIT_17s0000g04600.t01 Wine grape vacuole 34.73 26.53
GSMUA_Achr5P05340_001 Banana vacuole 36.26 26.46
EER96672 Sorghum vacuole 35.88 25.68
CDX73037 Canola vacuole 32.06 25.61
CDY66189 Canola vacuole 29.01 25.59
KRH03206 Soybean vacuole 32.06 25.0
CDX96505 Canola vacuole 31.3 25.0
AT1G74010.1 Thale cress vacuole 30.53 24.62
KRH56734 Soybean vacuole 32.06 24.56
Bra003820.1-P Field mustard vacuole 30.15 24.46
CDX68204 Canola vacuole 30.53 24.39
PGSC0003DMT400056839 Potato vacuole 29.01 24.36
Bra008126.1-P Field mustard vacuole 30.15 24.16
CDY47728 Canola vacuole 30.15 24.16
EER90869 Sorghum vacuole 36.64 24.12
Bra008127.1-P Field mustard vacuole 30.15 24.09
KRH54773 Soybean vacuole 30.92 24.04
Bra008125.1-P Field mustard cytosol, peroxisome, vacuole 21.37 23.83
KRH45407 Soybean nucleus 31.68 23.78
CDY66188 Canola vacuole 29.77 23.78
KRH07462 Soybean vacuole 31.3 23.63
Solyc03g114530.2.1 Tomato vacuole 29.77 23.49
CDY45863 Canola vacuole 29.01 23.38
Bra008124.1-P Field mustard vacuole 29.01 23.38
CDY47729 Canola vacuole 29.01 23.38
CDY45861 Canola vacuole 29.39 23.33
AT1G74000.1 Thale cress vacuole 29.01 23.1
AT1G74020.1 Thale cress vacuole 29.39 22.99
PGSC0003DMT400063277 Potato vacuole 29.01 22.89
CDX73038 Canola vacuole 28.24 22.77
CDX96506 Canola vacuole 28.24 22.77
CDX73039 Canola vacuole 28.24 22.7
Bra015943.1-P Field mustard vacuole 28.24 22.7
CDX96507 Canola vacuole 28.24 22.7
Solyc03g114560.2.1 Tomato extracellular 28.24 22.63
Solyc12g039070.1.1 Tomato nucleus 28.63 22.52
Solyc03g114550.1.1 Tomato vacuole 23.28 22.26
EES07950 Sorghum vacuole 33.21 22.19
KXG27696 Sorghum vacuole 32.44 21.79
PGSC0003DMT400063274 Potato vacuole 27.48 21.43
Solyc03g114540.1.1 Tomato vacuole 27.48 21.43
PGSC0003DMT400063286 Potato vacuole 27.1 21.26
VIT_17s0000g04610.t01 Wine grape vacuole 29.77 21.25
PGSC0003DMT400001736 Potato cytosol, peroxisome, vacuole 21.37 20.22
EER92507 Sorghum cytosol, golgi, mitochondrion, vacuole 30.92 19.66
VIT_17s0000g04590.t01 Wine grape endoplasmic reticulum, peroxisome, vacuole 33.97 19.65
KRH63133 Soybean peroxisome, vacuole 11.83 17.92
KXG36676 Sorghum vacuole 18.7 13.61
KXG36678 Sorghum vacuole 18.7 13.32
OQU92210 Sorghum golgi, plastid, vacuole 21.76 12.87
Bra015944.1-P Field mustard vacuole 27.1 11.89
Protein Annotations
EnsemblPlants:EES17425EnsemblPlantsGene:SORBI_3008G177600Gene3D:2.120.10.30GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0016844InterPro:6-blade_b-propeller_TolB-likeInterPro:IPR011042InterPro:Strictosidine_synthase
PANTHER:PTHR10426PANTHER:PTHR10426:SF56ProteinID:EES17425ProteinID:EES17425.2SEG:segSignalP:SignalP-noTM
SUPFAM:SSF63829UniParc:UPI00081AE704UniProt:C5YSF4MapMan:50.4.3::
Description
hypothetical protein
Coordinates
chr8:-:61157303..61159576
Molecular Weight (calculated)
28361.5 Da
IEP (calculated)
9.254
GRAVY (calculated)
-0.282
Length
262 amino acids
Sequence
(BLAST)
001: MLSHILFLLC LLQIVVTAAG NIHVPKADGS SAAAAAAFDF ISLPGGVTGA ESLAFDRRGQ GPYAGVSNSR VLKWGGSARG WMTFAYSTSY AHNPSCKASP
101: ARPGDAQDVY GRLVGLQFNV RTGDLYIADA YHGLLKVGPA GGEAKSTGDV YFTDISTSYT RRHNTKIMTN RDASGSWFWI KGPKAGTHEL FADLPSYPDN
201: GEDRWRGDSG RQTHIVGVRL DSKGVQRDKM TVEDKSVTLS DVSDKDGKLW LALRSLEMRW AL
Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)
001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL
Arabidopsis Description
SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.