CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 8
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG27696	Sorghum	vacuole	95.92	96.41
TraesCS5A01G131200.1	Wheat	vacuole	43.37	67.19
HORVU5Hr1G043200.4	Barley	vacuole	63.27	66.31
TraesCS5D01G139700.1	Wheat	vacuole	62.76	65.95
Os11t0142400-01	Rice	extracellular	15.31	65.93
TraesCS5B01G133600.1	Wheat	extracellular, vacuole	62.76	65.78
Zm00001d052471_P001	Maize	vacuole	76.79	61.93
Os12t0138800-01	Rice	golgi, mitochondrion, plasma membrane, vacuole	64.8	59.07
VIT_08s0007g05360.t01	Wine grape	vacuole	43.11	44.71
CDX79944	Canola	vacuole	40.05	41.87
Bra004613.1-P	Field mustard	vacuole	40.05	41.87
CDY23858	Canola	vacuole	39.54	41.44
KRH66810	Soybean	vacuole	40.31	41.36
Bra000222.1-P	Field mustard	cytosol	36.22	41.16
OQU75879	Sorghum	vacuole	31.89	40.85
AT2G41290.1	Thale cress	vacuole	38.27	39.89
CDY22515	Canola	vacuole	35.46	39.83
KXG39404	Sorghum	golgi, vacuole	34.18	39.3
EER96671	Sorghum	endoplasmic reticulum, golgi	34.95	39.14
CDY35420	Canola	vacuole	34.95	39.14
EES17427	Sorghum	golgi, vacuole	33.42	38.19
EES05895	Sorghum	golgi, vacuole	33.67	38.15
EES05427	Sorghum	vacuole	33.42	38.08
EER96672	Sorghum	vacuole	35.2	37.7
EER90208	Sorghum	vacuole	33.16	37.57
EES01841	Sorghum	vacuole	33.16	37.46
EES07680	Sorghum	golgi, vacuole	32.91	37.28
EES01763	Sorghum	vacuole	32.65	37.1
OQU85880	Sorghum	golgi, vacuole	32.65	36.99
EER90869	Sorghum	vacuole	37.5	36.93
OQU79673	Sorghum	vacuole	32.14	36.84
OQU87434	Sorghum	golgi, vacuole	32.91	36.44
OQU76676	Sorghum	extracellular, golgi, vacuole	31.89	36.13
PGSC0003DMT400048627	Potato	cytosol, golgi, mitochondrion, vacuole	31.38	36.07
EER92507	Sorghum	cytosol, golgi, mitochondrion, vacuole	36.22	34.47
EES17425	Sorghum	extracellular	22.19	33.21
KXG36678	Sorghum	vacuole	25.77	27.45
KXG36676	Sorghum	vacuole	24.49	26.67
OQU92210	Sorghum	golgi, plastid, vacuole	25.0	22.12

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	EntrezGene:8069289	UniProt:C5Y473	EnsemblPlants:EES07950
ProteinID:EES07950	ProteinID:EES07950.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016020	GO:GO:0016787	GO:GO:0016788	GO:GO:0016844	InterPro:IPR011042	PFAM:PF03088
PANTHER:PTHR10426	PANTHER:PTHR10426:SF22	EnsemblPlantsGene:SORBI_3005G029900	SUPFAM:SSF63829	SignalP:SignalP-noTM	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	TMHMM:TMhelix	UniParc:UPI0001A861C3	RefSeq:XP_002448962.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:+:2668341..2672889

Molecular Weight (calculated)

43032.4 Da

IEP (calculated)

6.728

GRAVY (calculated)

-0.172

Length

392 amino acids

Sequence
(BLAST)

001: MRARGEVALA ALLLAVAAAA AALLPSSSLD SRSDVRILEI GDGDDVLQLL PLLDGAVGPE SLVFADDDGG GPFTGVSDGR VLRWVPADRR WAEHSSSSAP
101: EDLLDSCRGS QDPGREHECG RPLGLKFNHA TGELYVADAY HGLRVVSPDD GKVSRPVAPQ WWRQGTGRPF SFANGVELDP ETGAVYFTET STRFQRREFL
201: SIVISGDTTG RLLRYDPKSG EVEVLVDGLA FPNGLAMSRD GTHLLLAETT TGRILRYWLR PPAAKAAGAM EEVARLPWFP DNIRMSPRGG FWVGIHAKRG
301: KIAEWCISYP WLRRVVLSLP PRHVQRASWL LNRLGRQVIA VRLSEEDGKV MEMISVHGDL QKVFRSVSEV EERNGSLWIG SVMSPFLGVY KL

Best Arabidopsis Sequence Match ( AT3G57030.1 )
(BLAST)

001: MTMMIITVFL TVIAAVLAIL VKNSQTGSGI FAPPEISGSR DVFPSAKVVN LTGASGPESI AFDPAGEGPY VGVSDGRILK WRGEPLGWSD FAHTSSNRQE
101: CARPFAPELE HVCGRPLGLR FDKKTGDLYI ADAYFGLLVV GPAGGLAKPL VTEAEGQPFR FTNDLDIDEQ EDVIYFTDTS ARFQRRQFLA AVLNVDKTGR
201: FIKYDRSSKK ATVLLQGLAF ANGVALSKDR SFVLVVETTT CKILRLWLSG PNAGTHQVFA ELPGFPDNIR RNSNGEFWVA LHSKKGLFAK LSLTQTWFRD
301: LVLRLPISPQ RLHSLFTGGI PHATAIKLSE SGKVLEVLED KEGKTLRFIS EVEEKDGKLW IGSVLVPFLG VYDL

Arabidopsis Description

SSL10Protein STRICTOSIDINE SYNTHASE-LIKE 10 [Source:UniProtKB/Swiss-Prot;Acc:Q4V3D9]
SUBAcon: [endoplasmic reticulum,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.