Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 8
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000222.1-P | Field mustard | cytosol | 47.12 | 52.17 |
| VIT_08s0007g05360.t01 | Wine grape | vacuole | 51.05 | 51.59 |
| CDY22515 | Canola | vacuole | 45.03 | 49.28 |
| CDY35420 | Canola | vacuole | 44.76 | 48.86 |
| AT2G41290.1 | Thale cress | vacuole | 47.64 | 48.4 |
| CDY23858 | Canola | vacuole | 46.86 | 47.86 |
| Bra004613.1-P | Field mustard | vacuole | 46.6 | 47.47 |
| CDX79944 | Canola | vacuole | 46.6 | 47.47 |
| KRG95135 | Soybean | endoplasmic reticulum | 40.31 | 41.51 |
| PGSC0003DMT400048627 | Potato | cytosol, golgi, mitochondrion, vacuole | 36.91 | 41.35 |
| KRH66809 | Soybean | endoplasmic reticulum | 40.05 | 41.24 |
| KRH07462 | Soybean | vacuole | 36.91 | 40.63 |
| KRH45407 | Soybean | nucleus | 36.91 | 40.4 |
| HORVU5Hr1G043200.4 | Barley | vacuole | 39.53 | 40.37 |
| EES07950 | Sorghum | vacuole | 41.36 | 40.31 |
| TraesCS5D01G139700.1 | Wheat | vacuole | 39.27 | 40.21 |
| TraesCS5B01G133600.1 | Wheat | extracellular, vacuole | 39.27 | 40.11 |
| KXG27696 | Sorghum | vacuole | 40.84 | 40.0 |
| TraesCS5A01G131200.1 | Wheat | vacuole | 25.39 | 38.34 |
| Os12t0138800-01 | Rice | golgi, mitochondrion, plasma membrane, vacuole | 41.36 | 36.74 |
| KRH54773 | Soybean | vacuole | 30.89 | 35.01 |
| KRH03206 | Soybean | vacuole | 30.63 | 34.82 |
| KRH56734 | Soybean | vacuole | 31.15 | 34.8 |
| KRH63133 | Soybean | peroxisome, vacuole | 15.71 | 34.68 |
| KRH26734 | Soybean | vacuole | 32.46 | 33.97 |
| KRH56180 | Soybean | endoplasmic reticulum | 37.7 | 32.65 |
| KRH10120 | Soybean | endoplasmic reticulum | 34.55 | 32.2 |
| KRH23218 | Soybean | golgi, vacuole | 33.77 | 31.46 |
| KRH22599 | Soybean | vacuole | 31.41 | 31.17 |
| Zm00001d052471_P001 | Maize | vacuole | 39.53 | 31.07 |
| Os11t0142400-01 | Rice | extracellular | 7.07 | 29.67 |
| Os11t0142300-00 | Rice | extracellular, plasma membrane | 7.85 | 26.79 |
| KRH69688 | Soybean | golgi, vacuole | 23.82 | 24.8 |
| KRH07935 | Soybean | endoplasmic reticulum | 23.56 | 23.81 |
| KRH37504 | Soybean | vacuole | 21.99 | 23.46 |
| KRH69689 | Soybean | plastid | 23.3 | 22.47 |
| KRH37503 | Soybean | vacuole | 17.54 | 21.34 |
Protein Annotations
| EntrezGene:100789150 | Gene3D:2.120.10.30 | MapMan:50.4.3 | InterPro:6-blade_b-propeller_TolB-like | EMBL:ACUP02002012 | EnsemblPlantsGene:GLYMA_03G130200 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016020 | GO:GO:0016787 |
| GO:GO:0016788 | GO:GO:0016844 | UniProt:I1JN76 | InterPro:IPR011042 | EnsemblPlants:KRH66810 | ProteinID:KRH66810 |
| ProteinID:KRH66810.1 | PFAM:PF03088 | PANTHER:PTHR10426 | PANTHER:PTHR10426:SF29 | SUPFAM:SSF63829 | SignalP:SignalP-noTM |
| InterPro:Strictosidine_synth_cons-reg | InterPro:Strictosidine_synthase | TMHMM:TMhelix | UniParc:UPI0002339EA9 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr3:+:34499166..34504224
Molecular Weight (calculated)
42578.0 Da
IEP (calculated)
8.638
GRAVY (calculated)
-0.236
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MRRQQLHFAA VVAAIVVTAW VAHMRGGVGQ SEAKGWQFEA VPIDGAVGPE SFSFDPRGEG PYTGVSDGRI IKWHQTQNRW LNFSAIASSS HWDEECGGPC
101: DEHSKKEHVC GRPLGLCFST LSNDLYIADS YKGLVVVGPH GGTTRRLVST IEGEPLAFTN GLDVDQRTGA VYFTSSSSKY PRRNYMSLIL SRDKTGMLMK
201: YEPQSEQVSV LLKNLSYANG VALSKDGEYI LIIETTTCRV LRYWLETPKT GTLEVFADLP GFPDNIKRSP RGGFWVGIYS RREKIIQWIL SYPWIGKVLL
301: RLPLDIPKAY SYLAKLKRSN GMAIRLSEQG DILEIVNEKN GSIGRSISEV EERDGILWVG SIDAPFVGKY NIHVVEGQVK RI
101: DEHSKKEHVC GRPLGLCFST LSNDLYIADS YKGLVVVGPH GGTTRRLVST IEGEPLAFTN GLDVDQRTGA VYFTSSSSKY PRRNYMSLIL SRDKTGMLMK
201: YEPQSEQVSV LLKNLSYANG VALSKDGEYI LIIETTTCRV LRYWLETPKT GTLEVFADLP GFPDNIKRSP RGGFWVGIYS RREKIIQWIL SYPWIGKVLL
301: RLPLDIPKAY SYLAKLKRSN GMAIRLSEQG DILEIVNEKN GSIGRSISEV EERDGILWVG SIDAPFVGKY NIHVVEGQVK RI
001: MMKLLLVVAT SVALIFSVTD LSGEGPKHGG ESMLTVQIPD FRLIPTTGAL GPESFVFDFF GDGPYTGLSD GRIVKWLANE SRWIDFAVTT SAREGCEGPH
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI
Arabidopsis Description
SSL2Protein STRICTOSIDINE SYNTHASE-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLG8]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.