Factsheet for TraesCSU01G189700.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G076400.1	Wheat	vacuole	100.0	100.0
TraesCS2B01G092900.1	Wheat	golgi, vacuole	96.21	96.49
HORVU6Hr1G026020.1	Barley	cytosol	65.31	90.32
Zm00001d029115_P001	Maize	extracellular, vacuole	52.77	77.35
Zm00001d029108_P001	Maize	vacuole	69.39	75.08
Zm00001d029117_P001	Maize	vacuole	72.89	73.96
Zm00001d029111_P001	Maize	vacuole	72.89	73.96
KXG39404	Sorghum	golgi, vacuole	72.59	73.02
OQU75879	Sorghum	vacuole	65.01	72.88
Os08t0175000-00	Rice	golgi, mitochondrion, vacuole	74.34	71.63
Os08t0442200-01	Rice	extracellular	66.18	64.86
TraesCSU01G223800.1	Wheat	vacuole	49.27	48.99
TraesCSU01G240600.1	Wheat	cytosol	26.82	48.68
TraesCSU01G104000.1	Wheat	golgi, vacuole	48.69	47.99
TraesCSU01G255900.1	Wheat	cytosol	26.24	47.62
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	42.27	46.77
VIT_10s0042g00010.t01	Wine grape	vacuole	41.98	45.71
GSMUA_Achr5P05340_001	Banana	vacuole	47.23	45.13
VIT_13s0074g00070.t01	Wine grape	vacuole	35.86	44.89
VIT_00s0575g00010.t01	Wine grape	vacuole	40.82	44.87
VIT_10s0071g00020.t01	Wine grape	vacuole	40.23	44.66
VIT_10s0042g00020.t01	Wine grape	vacuole	41.69	44.41
VIT_10s0042g00050.t01	Wine grape	vacuole	41.4	44.1
VIT_00s0575g00020.t01	Wine grape	vacuole	41.11	43.79
VIT_10s0071g00010.t01	Wine grape	vacuole	40.82	43.48
VIT_13s0074g00080.t01	Wine grape	vacuole	40.52	43.17
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	22.45	42.54
VIT_10s0042g00030.t01	Wine grape	vacuole	33.24	41.76
VIT_17s0000g04600.t01	Wine grape	vacuole	40.23	40.23
PGSC0003DMT400056839	Potato	vacuole	35.86	39.42
VIT_10s0071g00250.t01	Wine grape	vacuole	38.48	38.82
KRH07462	Soybean	vacuole	38.78	38.33
KRH45407	Soybean	nucleus	38.19	37.54
PGSC0003DMT400063282	Potato	extracellular, vacuole	16.91	37.42
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	29.45	36.46
Solyc12g039070.1.1	Tomato	nucleus	35.28	36.34
CDX73037	Canola	vacuole	34.69	36.28
PGSC0003DMT400063277	Potato	vacuole	34.69	35.84
Solyc03g114560.2.1	Tomato	extracellular	33.82	35.47
Solyc03g114550.1.1	Tomato	vacuole	28.28	35.4
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	24.2	35.32
PGSC0003DMT400063274	Potato	vacuole	34.4	35.12
CDX96505	Canola	vacuole	33.53	35.06
Solyc03g114530.2.1	Tomato	vacuole	33.82	34.94
Bra003820.1-P	Field mustard	vacuole	32.65	34.67
AT1G74010.1	Thale cress	vacuole	32.65	34.46
PGSC0003DMT400063286	Potato	vacuole	33.24	34.13
KRH54773	Soybean	vacuole	33.53	34.12
AT1G74000.1	Thale cress	vacuole	32.65	34.04
Solyc03g114540.1.1	Tomato	vacuole	33.24	33.93
VIT_17s0000g04610.t01	Wine grape	vacuole	35.57	33.24
Bra008127.1-P	Field mustard	vacuole	31.78	33.23
KRH03206	Soybean	vacuole	32.36	33.04
CDY45861	Canola	vacuole	31.78	33.03
CDY66188	Canola	vacuole	31.49	32.93
CDX68204	Canola	vacuole	31.49	32.93
CDY47728	Canola	vacuole	31.2	32.72
Bra008126.1-P	Field mustard	vacuole	31.2	32.72
CDY47729	Canola	vacuole	30.9	32.62
CDX96506	Canola	vacuole	30.9	32.62
AT1G74020.1	Thale cress	vacuole	31.78	32.54
KRH56734	Soybean	vacuole	32.36	32.46
KRH63133	Soybean	peroxisome, vacuole	16.33	32.37
CDY66189	Canola	vacuole	27.99	32.32
CDY45863	Canola	vacuole	30.61	32.31
Bra008124.1-P	Field mustard	vacuole	30.61	32.31
Bra015943.1-P	Field mustard	vacuole	30.61	32.21
CDX96507	Canola	vacuole	30.61	32.21
CDX73038	Canola	vacuole	30.32	32.0
CDX73039	Canola	vacuole	30.03	31.6
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	38.19	28.92
Bra015944.1-P	Field mustard	vacuole	30.61	17.59

Protein Annotations

EnsemblPlants:TraesCSU01G189700.1	EnsemblPlantsGene:TraesCSU01G189700	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF56	PFAM:PF03088	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF63829	TMHMM:TMhelix	MapMan:50.4.3	:	:	:

Description

No Description!

Coordinates

chrUn:-:285394667..285395787

Molecular Weight (calculated)

36838.8 Da

IEP (calculated)

7.600

GRAVY (calculated)

-0.179

Length

343 amino acids

Sequence
(BLAST)

001: MGRRRSASGW LVLLLALLAV SVAPSCSAAE VKTSPTEWSL HLPLPNGVTG AESLAFDARG QGPYTGGSDG RVLKWGGSSV GWTTFAYHAN YRKFPMCTVP
101: VAPSEETESL CGRPLGLAFH RKSGDLYIAD AYKGLMRVGS DGGEAEVLAT KAGGVRFNFV NGIDIDQVTG DVYFTDSSVT YPRRFNTEIM MNADATGRLL
201: KYDAQTKQVT VLKDGLPYPN GIAVSHDRTY VVVAHTVPCQ AHRYYLQGPK AGHYELLADL PGYPDNVRRD GKGGYWVALN QEKGRPGATT APVKHLVGVR
301: LDGGGVEVEE LTAAKGVTLS EVTERKGQLW LGSVELDYIG LVA

Best Arabidopsis Sequence Match ( AT2G41290.1 )
(BLAST)

001: MMKLLLVVAT SVALIFSVTD LSGEGPKHGG ESMLTVQIPD FRLIPTTGAL GPESFVFDFF GDGPYTGLSD GRIVKWLANE SRWIDFAVTT SAREGCEGPH
101: EHQRTEHVCG RPLGLAFDKS TGDLYIADAY MGLLKVGPTG GVATQVLPRE LNEALRFTNS LDINPRTGVV YFTDSSSVYQ RRNYIGAMMS GDKTGRLMKY
201: DNTKQVTTLL SNLAFVNGVA LSQNGDYLLV VETAMCRILR YWLNETSVKS QSHDNYEIFA EGLPGFPDNI KRSPRGGFWV GLNTKHSKLT KFAMSNAWLG
301: RAALGLPVDW MKVHSVWARY NGNGMAVRLS EDSGVILEVF EGKNENKWIS ISEVEEKDGT LWVGSVNTPF AGMYKI

Arabidopsis Description

SSL2Protein STRICTOSIDINE SYNTHASE-LIKE 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SLG8]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.