Factsheet for HORVU5Hr1G093840.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 4
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
TargetP:	secretory
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G383000.1	Wheat	vacuole	95.58	95.58
TraesCS5B01G382800.1	Wheat	vacuole	94.4	93.84
TraesCS5D01G389100.1	Wheat	plastid, vacuole	95.28	90.99
HORVU3Hr1G065520.3	Barley	extracellular	85.25	89.75
Zm00001d029115_P001	Maize	extracellular, vacuole	56.05	81.2
Zm00001d029117_P001	Maize	vacuole	75.52	75.74
Zm00001d029111_P001	Maize	vacuole	75.52	75.74
Zm00001d029108_P001	Maize	vacuole	70.8	75.71
KXG39404	Sorghum	golgi, vacuole	74.34	73.9
Os01t0698200-00	Rice	mitochondrion	62.54	73.1
HORVU5Hr1G009400.2	Barley	cytosol, mitochondrion, plastid, vacuole	29.2	72.79
HORVU6Hr1G026020.1	Barley	cytosol	53.1	72.58
OQU75879	Sorghum	vacuole	65.19	72.22
HORVU2Hr1G012970.2	Barley	mitochondrion	71.68	69.43
HORVU2Hr1G013460.2	Barley	golgi, mitochondrion, vacuole	58.41	68.04
HORVU2Hr1G064060.1	Barley	mitochondrion, vacuole	39.23	52.36
HORVU5Hr1G058910.2	Barley	endoplasmic reticulum, extracellular, vacuole	49.56	48.55
GSMUA_Achr3P06240_001	Banana	cytosol, mitochondrion, peroxisome, vacuole	43.95	48.06
HORVU3Hr1G109810.1	Barley	golgi, vacuole	48.67	47.28
HORVU5Hr1G091230.1	Barley	golgi, mitochondrion, plastid, vacuole	48.97	46.63
HORVU7Hr1G028580.1	Barley	golgi, vacuole	48.08	46.31
VIT_10s0042g00010.t01	Wine grape	vacuole	42.77	46.03
VIT_00s0575g00010.t01	Wine grape	vacuole	41.3	44.87
GSMUA_Achr5P05340_001	Banana	vacuole	47.49	44.85
HORVU5Hr1G058940.2	Barley	vacuole	48.08	44.41
VIT_10s0042g00020.t01	Wine grape	vacuole	42.18	44.41
VIT_13s0074g00070.t01	Wine grape	vacuole	35.69	44.16
VIT_10s0071g00020.t01	Wine grape	vacuole	40.12	44.01
VIT_10s0042g00050.t01	Wine grape	vacuole	41.0	43.17
VIT_13s0074g00080.t01	Wine grape	vacuole	41.0	43.17
VIT_00s0575g00020.t01	Wine grape	vacuole	41.0	43.17
HORVU3Hr1G074780.3	Barley	cytosol, vacuole	47.49	43.05
VIT_10s0071g00010.t01	Wine grape	vacuole	40.41	42.55
HORVU5Hr1G078340.1	Barley	golgi, vacuole	30.38	42.21
VIT_10s0042g00030.t01	Wine grape	vacuole	33.33	41.39
HORVU7Hr1G028550.2	Barley	plastid	20.94	39.89
VIT_17s0000g04600.t01	Wine grape	vacuole	40.12	39.65
VIT_17s0000g04580.t01	Wine grape	extracellular, vacuole	20.35	38.12
KRH07462	Soybean	vacuole	38.94	38.04
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	26.25	37.87
VIT_10s0071g00250.t01	Wine grape	vacuole	37.76	37.65
KRH45407	Soybean	nucleus	38.35	37.25
HORVU5Hr1G114800.1	Barley	extracellular	23.6	37.21
AT1G74010.1	Thale cress	vacuole	35.1	36.62
PGSC0003DMT400056839	Potato	vacuole	33.63	36.54
Bra003820.1-P	Field mustard	vacuole	34.51	36.22
Solyc03g114550.1.1	Tomato	vacuole	29.2	36.13
PGSC0003DMT400063282	Potato	extracellular, vacuole	16.52	36.13
HORVU5Hr1G095260.1	Barley	extracellular	42.48	36.09
Solyc03g114560.2.1	Tomato	extracellular	34.81	36.09
PGSC0003DMT400063274	Potato	vacuole	35.4	35.71
PGSC0003DMT400063286	Potato	vacuole	35.1	35.63
Solyc03g114540.1.1	Tomato	vacuole	35.1	35.42
Bra008127.1-P	Field mustard	vacuole	34.22	35.37
HORVU5Hr1G114720.1	Barley	plastid	19.76	35.26
PGSC0003DMT400063277	Potato	vacuole	34.51	35.24
CDX73037	Canola	vacuole	33.92	35.06
CDY45861	Canola	vacuole	33.92	34.85
KRH03206	Soybean	vacuole	34.51	34.82
KRH54773	Soybean	vacuole	34.51	34.72
PGSC0003DMT400001736	Potato	cytosol, peroxisome, vacuole	28.32	34.66
Solyc03g114530.2.1	Tomato	vacuole	33.92	34.64
CDX96506	Canola	vacuole	33.04	34.46
CDY47729	Canola	vacuole	33.04	34.46
CDX68204	Canola	vacuole	33.33	34.45
CDY66188	Canola	vacuole	33.33	34.45
CDY66189	Canola	vacuole	30.09	34.34
CDY47728	Canola	vacuole	33.04	34.25
Bra008126.1-P	Field mustard	vacuole	33.04	34.25
Solyc12g039070.1.1	Tomato	nucleus	33.63	34.23
KRH56734	Soybean	vacuole	34.51	34.21
Bra008124.1-P	Field mustard	vacuole	32.74	34.15
CDY45863	Canola	vacuole	32.74	34.15
CDX73038	Canola	vacuole	32.45	33.85
CDX96505	Canola	vacuole	32.74	33.84
AT1G74020.1	Thale cress	vacuole	33.33	33.73
KRH63133	Soybean	peroxisome, vacuole	16.81	32.95
AT1G74000.1	Thale cress	vacuole	31.86	32.83
CDX96507	Canola	vacuole	31.56	32.82
Bra015943.1-P	Field mustard	vacuole	31.56	32.82
VIT_17s0000g04610.t01	Wine grape	vacuole	35.1	32.43
HORVU4Hr1G061230.2	Barley	peroxisome, vacuole	40.71	32.24
CDX73039	Canola	vacuole	30.97	32.21
HORVU5Hr1G043200.4	Barley	vacuole	35.1	31.82
VIT_17s0000g04590.t01	Wine grape	endoplasmic reticulum, peroxisome, vacuole	38.64	28.92
HORVU7Hr1G019170.1	Barley	cytosol	13.86	27.33
HORVU1Hr1G052450.8	Barley	extracellular, golgi, vacuole	28.91	26.63
HORVU4Hr1G016850.1	Barley	cytosol	13.27	25.86
HORVU6Hr1G025030.1	Barley	cytosol	6.78	20.72
Bra015944.1-P	Field mustard	vacuole	32.15	18.26

Protein Annotations

EnsemblPlants:HORVU5Hr1G093840.1	EnsemblPlantsGene:HORVU5Hr1G093840	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016844	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:Strictosidine_synth_cons-reg
InterPro:Strictosidine_synthase	PANTHER:PTHR10426	PANTHER:PTHR10426:SF56	PFAM:PF03088	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF63829	TMHMM:TMhelix	UniParc:UPI000B463417	UniProt:A0A287SAM4	MapMan:50.4.3	:

Description

No Description!

Coordinates

chrchr5H:-:593141517..593142880

Molecular Weight (calculated)

36656.7 Da

IEP (calculated)

7.934

GRAVY (calculated)

-0.090

Length

339 amino acids

Sequence
(BLAST)

001: TTMGRNLAAI VLVVLACLVS LAAAEQIKTT NRRWSYRLPL PDGVSGAESL AFSGKDGVYT GVSDGRVLRW GGSAAGWSTF AYNANYRKIP LCSDTGVPSE
101: QKESICGRPL GVRFYRKTGE LIIADAYMGL MKVGPDGGEA QVLATEADGV RFHFLNGLDV DQATGDVYFT DSSANYPRRF NTEIIMNADA TGRLLKYDAR
201: TKVVTVLKAE LPYPNGVALS RDMTHVVVAH TVPCQAFRYW LKGPKAGRYE LLADLPGYPD NVRRDGQGGF WVALNQEKAR LNSTAAAPVK HLVGVRLSAD
301: GVEVEELTAA RGVTLSEVAE NGNKLWLGSV ELDYIGVFA

Best Arabidopsis Sequence Match ( AT1G08470.1 )
(BLAST)

001: MAMSILAKIF LVFAIYCAID PFSHSSISKF PDFKTYKIDM PPLSSLPKER DRQNLLQNSE IRFLNEVQGP ESIAFDPQGR GPYTGVADGR ILFWNGTRWT
101: DFAYTSNNRS ELCDPKPSLL DYLKDEDICG RPLGLRFDKK NGDLYIADAY LGIMKVGPEG GLATSVTNEA DGVPLRFTND LDIDDEGNVY FTDSSSFFQR
201: RKFMLLIVSG EDSGRVLKYN PKTKETTTLV RNLQFPNGLS LGKDGSFFIF CEGSIGRLRK YWLKGEKAGT SEVVALLHGF PDNIRTNKDG DFWVAVHCHR
301: NIFTHLMAHY PRVRKFFLKL PISVKFQYLL QVGGWPHAVA VKYSEEGKVL KVLEDSKGKV VKAVSEVEEK DGKLWMGSVL MSFIAVYDLP

Arabidopsis Description

SSL3SSL3 [Source:UniProtKB/TrEMBL;Acc:A0A178WK70]
SUBAcon: [endoplasmic reticulum,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.