Factsheet for Bra014536.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

plastid 1
mitochondrion 2
vacuole 3
cytosol 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	cytosol, vacuole
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX89027	Canola	endoplasmic reticulum, vacuole	96.86	99.26
AT3G59530.3	Thale cress	golgi, vacuole	89.13	91.56
Bra007457.1-P	Field mustard	golgi, vacuole	91.3	91.53
VIT_05s0102g00880.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	74.88	76.35
KRH10120	Soybean	endoplasmic reticulum	74.15	74.88
KRH23218	Soybean	golgi, vacuole	73.91	74.63
PGSC0003DMT400030927	Potato	golgi, plasma membrane, vacuole	68.84	70.02
Solyc03g053130.2.1	Tomato	extracellular	69.32	69.32
TraesCS4B01G215300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	63.53	63.68
TraesCS4D01G215800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	63.04	63.2
TraesCS4A01G089000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	63.04	63.2
EER92507	Sorghum	cytosol, golgi, mitochondrion, vacuole	62.32	62.62
HORVU4Hr1G061230.2	Barley	peroxisome, vacuole	64.25	62.15
Zm00001d047858_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, vacuole	60.87	61.16
Os03t0263600-01	Rice	cytosol, golgi, mitochondrion, vacuole	63.04	61.12
GSMUA_Achr11P...	Banana	golgi, vacuole	51.69	55.73
Bra018623.1-P	Field mustard	cytosol	39.86	47.01
Bra002383.1-P	Field mustard	vacuole	42.03	44.05
Bra007294.1-P	Field mustard	vacuole	36.72	40.64
Bra000223.1-P	Field mustard	vacuole	34.54	38.75
Bra004614.1-P	Field mustard	vacuole	33.82	37.94
Bra000222.1-P	Field mustard	cytosol	30.68	36.81
Bra014655.1-P	Field mustard	endoplasmic reticulum, golgi	32.37	35.17
Bra034344.1-P	Field mustard	vacuole	31.4	35.14
Bra014652.1-P	Field mustard	extracellular, golgi, vacuole	30.92	34.59
Bra007293.1-P	Field mustard	vacuole	30.68	34.42
Bra004613.1-P	Field mustard	vacuole	31.16	34.4
Bra003263.1-P	Field mustard	vacuole	30.43	34.05
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	19.32	34.04
Bra008127.1-P	Field mustard	vacuole	24.64	31.1
Bra008126.1-P	Field mustard	vacuole	24.4	30.89
Bra015943.1-P	Field mustard	vacuole	23.43	29.75
Bra008124.1-P	Field mustard	vacuole	22.95	29.23
Bra003820.1-P	Field mustard	vacuole	22.46	28.79
Bra038899.1-P	Field mustard	golgi, vacuole	24.15	26.95
Bra038898.1-P	Field mustard	golgi, vacuole	22.46	23.43
Bra036798.1-P	Field mustard	vacuole	22.22	22.22
Bra015944.1-P	Field mustard	vacuole	22.71	15.75

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	EnsemblPlantsGene:Bra014536	EnsemblPlants:Bra014536.1	EnsemblPlants:Bra014536.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016020	GO:GO:0016021	GO:GO:0016844	InterPro:IPR011042	UniProt:M4DDG8	PFAM:PF03088
PANTHER:PTHR10426	PANTHER:PTHR10426:SF21	SUPFAM:SSF63829	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TMHMM:TMhelix
UniParc:UPI0002543FDA	SEG:seg	:	:	:	:

Description

AT3G59530 (E=1e-204) | strictosidine synthase family protein

Coordinates

chrA04:-:1274523..1275992

Molecular Weight (calculated)

46654.1 Da

IEP (calculated)

6.754

GRAVY (calculated)

-0.263

Length

414 amino acids

Sequence
(BLAST)

001: MEKKGQQHST HDSFLTHHPV LSIIALSVIF IAIDPFHMSP IGGREFKPVK HEVAPYKQVM ENWPRDNLSQ LGQHGKLEFV DQVFGPESLE FDGLGRGPYT
101: GLADGRVVRW MGEATGWETF SVVTSKWSEE ACARGVDSTT NKQWKHEKLC GRPLGLRFDK ETGNLYIADA YYGLLVVGPE GGVATPLATH VEGKPILFAN
201: DLDIHRNGSI FFTDTSKRYD RANHFFILLE GESTGRLLRY DPPTKTTHIV LEGLAFPNGI QLSKDQSFLL FTETTNCRLV KYWLEGAKTG EVEVVADLPG
301: FPDNVRMNEK GEFWVAIDCC RTRPQEVLTN NPWIKSIYFR LPIPMKLLAK AMGMKMYTVI SRFDADGEVL EVLEDRQGKV MKLVSEVREV QGKLWIGTVA
401: HNHIASVPYP LTMN

Best Arabidopsis Sequence Match ( AT3G59530.1 )
(BLAST)

001: MEKKGQHGTY ESMMTHHPIL CIIALSVLFI AIDPFHMSPI GGREFKPVKH EVAPYKEVMG SWPRDNLSRL GNHGKLEFVD QVFGPESLEF DSLGRGPYTG
101: LADGRVVRWM GEAIGWETFS VVTSKWSEEA CVRGVDSTTN KQWKHEKLCG RPLGLRFHKE TGNLYIADAY YGLLVVGPEG GIATPLATHV EGKPILFAND
201: LDIHRNGSIF FTDTSKRYDR ANHFFILLEG ESTGRLLRYD PPTKTTHIVL EGLAFPNGIQ LSKDQSFLLF TETTNCRLVK YWLEGPKMGE VEVVADLPGF
301: PDNVRINEEG QFWVAIDCCR TPAQEVLTNN PWIRSIYFRL PIPMKLLAKT MGMRMYTVIS RFDEEGKVLE VLEDRQGKVM KLWIGTVAHN HIATLPYPLT
401: MNQ

Arabidopsis Description

SSL13Protein STRICTOSIDINE SYNTHASE-LIKE 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1B4]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.