Factsheet for Bra007457.1-P

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

plastid 1
mitochondrion 1
vacuole 4
extracellular 2
golgi 3
plasma membrane 2
endoplasmic reticulum 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05993	Canola	endoplasmic reticulum, golgi, vacuole	94.67	97.02
CDX71901	Canola	extracellular, golgi, vacuole	93.22	95.53
Bra014536.1-P	Field mustard	vacuole	91.53	91.3
AT3G59530.3	Thale cress	golgi, vacuole	86.68	88.83
VIT_05s0102g00880.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	74.09	75.37
KRH10120	Soybean	endoplasmic reticulum	74.33	74.88
KRH23218	Soybean	golgi, vacuole	74.09	74.63
PGSC0003DMT400030927	Potato	golgi, plasma membrane, vacuole	69.73	70.76
Solyc03g053130.2.1	Tomato	extracellular	70.22	70.05
TraesCS4B01G215300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	64.65	64.65
TraesCS4A01G089000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	64.16	64.16
TraesCS4D01G215800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	64.16	64.16
HORVU4Hr1G061230.2	Barley	peroxisome, vacuole	65.38	63.08
EER92507	Sorghum	cytosol, golgi, mitochondrion, vacuole	62.23	62.38
Zm00001d047858_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, vacuole	61.5	61.65
Os03t0263600-01	Rice	cytosol, golgi, mitochondrion, vacuole	63.68	61.59
GSMUA_Achr11P...	Banana	golgi, vacuole	53.03	57.03
Bra018623.1-P	Field mustard	cytosol	39.95	47.01
Bra002383.1-P	Field mustard	vacuole	41.89	43.8
Bra007294.1-P	Field mustard	vacuole	37.05	40.91
Bra000223.1-P	Field mustard	vacuole	34.87	39.02
Bra004614.1-P	Field mustard	vacuole	34.14	38.21
Bra000222.1-P	Field mustard	cytosol	30.99	37.1
Bra034344.1-P	Field mustard	vacuole	31.96	35.68
Bra014655.1-P	Field mustard	endoplasmic reticulum, golgi	32.69	35.43
Bra014652.1-P	Field mustard	extracellular, golgi, vacuole	30.99	34.59
Bra007293.1-P	Field mustard	vacuole	30.75	34.42
Bra003263.1-P	Field mustard	vacuole	30.51	34.05
Bra004613.1-P	Field mustard	vacuole	30.75	33.87
Bra008125.1-P	Field mustard	cytosol, peroxisome, vacuole	18.89	33.19
Bra008126.1-P	Field mustard	vacuole	24.21	30.58
Bra008127.1-P	Field mustard	vacuole	23.73	29.88
Bra015943.1-P	Field mustard	vacuole	23.0	29.14
Bra008124.1-P	Field mustard	vacuole	22.76	28.92
Bra003820.1-P	Field mustard	vacuole	22.03	28.17
Bra038899.1-P	Field mustard	golgi, vacuole	24.21	26.95
Bra038898.1-P	Field mustard	golgi, vacuole	22.52	23.43
Bra036798.1-P	Field mustard	vacuole	22.52	22.46
Bra015944.1-P	Field mustard	vacuole	22.28	15.41

Protein Annotations

Gene3D:2.120.10.30	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	EnsemblPlantsGene:Bra007457	EnsemblPlants:Bra007457.1	EnsemblPlants:Bra007457.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016020	GO:GO:0016021	GO:GO:0016844	InterPro:IPR011042	UniProt:M4CTB4	PFAM:PF03088
PANTHER:PTHR10426	PANTHER:PTHR10426:SF21	SUPFAM:SSF63829	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TMHMM:TMhelix
UniParc:UPI0002542ED1	SEG:seg	:	:	:	:

Description

AT3G59530 (E=4e-204) | strictosidine synthase family protein

Coordinates

chrA09:+:29303949..29305448

Molecular Weight (calculated)

46527.2 Da

IEP (calculated)

7.233

GRAVY (calculated)

-0.213

Length

413 amino acids

Sequence
(BLAST)

001: MEKKGQNGTH DSLLTHYPVL CIIALSIIFI AIDPFHISPV GGREFKPVKH EVAPYKQVMD NWPRDNLSQL GHHGKLEFVD EVFGPESLEF DSLGRGPYTG
101: LADGRVVRWM GEAIGWETFS VVTSKWSEKI CARGVHSTTN KQRKHEKLCG RPLGLRFDKE SGNLYIADAY YGLLMVGPEG GVATPLATHV EGKPILFAND
201: LDIHRNGSIF FTDTSKRYDR ANHFFILLEG ESTGRLLRYD PPTKTTHVVL DGLAFPNGIQ LSKDQSFLLF TETTNCRLVK YWLEGSKRGE IEVVADLPGF
301: PDNVRMNEKG EFWVAIDCCR TPVQEVLANN PWIKSIYFRL PIPMKLLATA MGMKMYTVIS RFDEDGKVLE VLEDRHGKVM KLVSEVREVQ GKLWIGTVAH
401: NHIATLPYPL AVN

Best Arabidopsis Sequence Match ( AT3G59530.1 )
(BLAST)

001: MEKKGQHGTY ESMMTHHPIL CIIALSVLFI AIDPFHMSPI GGREFKPVKH EVAPYKEVMG SWPRDNLSRL GNHGKLEFVD QVFGPESLEF DSLGRGPYTG
101: LADGRVVRWM GEAIGWETFS VVTSKWSEEA CVRGVDSTTN KQWKHEKLCG RPLGLRFHKE TGNLYIADAY YGLLVVGPEG GIATPLATHV EGKPILFAND
201: LDIHRNGSIF FTDTSKRYDR ANHFFILLEG ESTGRLLRYD PPTKTTHIVL EGLAFPNGIQ LSKDQSFLLF TETTNCRLVK YWLEGPKMGE VEVVADLPGF
301: PDNVRINEEG QFWVAIDCCR TPAQEVLTNN PWIRSIYFRL PIPMKLLAKT MGMRMYTVIS RFDEEGKVLE VLEDRQGKVM KLWIGTVAHN HIATLPYPLT
401: MNQ

Arabidopsis Description

SSL13Protein STRICTOSIDINE SYNTHASE-LIKE 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1B4]
SUBAcon: [extracellular,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.