Factsheet for Os03t0263600-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, vacuole, cytosol

Predictor Summary:

plastid 1
vacuole 2
mitochondrion 2
cytosol 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G089000.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	81.73	84.5
TraesCS4D01G215800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	81.5	84.26
TraesCS4B01G215300.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	81.03	83.78
Zm00001d047858_P001	Maize	endoplasmic reticulum, golgi, mitochondrion, vacuole	79.63	82.52
EER92507	Sorghum	cytosol, golgi, mitochondrion, vacuole	78.92	81.8
HORVU4Hr1G061230.2	Barley	peroxisome, vacuole	81.26	81.07
VIT_05s0102g00880.t01	Wine grape	endoplasmic reticulum, extracellular, golgi	61.12	64.29
KRH10120	Soybean	endoplasmic reticulum	61.59	64.15
AT3G59530.3	Thale cress	golgi, vacuole	60.42	64.02
Bra007457.1-P	Field mustard	golgi, vacuole	61.59	63.68
KRH23218	Soybean	golgi, vacuole	61.12	63.66
CDX71901	Canola	extracellular, golgi, vacuole	59.72	63.28
Bra014536.1-P	Field mustard	vacuole	61.12	63.04
CDX89027	Canola	endoplasmic reticulum, vacuole	59.25	62.62
CDY05993	Canola	endoplasmic reticulum, golgi, vacuole	59.02	62.53
PGSC0003DMT400030927	Potato	golgi, plasma membrane, vacuole	59.02	61.92
Solyc03g053130.2.1	Tomato	extracellular	59.25	61.11
GSMUA_Achr11P...	Banana	golgi, vacuole	50.12	55.73
Os03t0750700-01	Rice	plasma membrane	39.81	42.61
Os07t0543600-00	Rice	golgi, vacuole	32.55	39.71
Os08t0175000-00	Rice	golgi, mitochondrion, vacuole	32.79	39.33
Os01t0698200-00	Rice	mitochondrion	26.0	38.28
Os08t0442200-01	Rice	extracellular	30.91	37.71
Os06t0623700-01	Rice	golgi, vacuole	30.21	36.86
Os09t0374900-00	Rice	cytosol, golgi, plastid, vacuole	32.55	36.39
Os12t0138800-01	Rice	golgi, mitochondrion, plasma membrane, vacuole	31.85	31.63
Os11t0142400-01	Rice	extracellular	6.56	30.77
Os10t0543500-01	Rice	plasma membrane	18.03	30.2
Os07t0614000-02	Rice	vacuole	25.53	29.7
Os11t0142300-00	Rice	extracellular, plasma membrane	7.03	26.79

Protein Annotations

Gene3D:2.120.10.30	EntrezGene:4332335	MapMan:50.4.3	InterPro:6-blade_b-propeller_TolB-like	ProteinID:AAP06859.1	ProteinID:ABF95112.1
EMBL:AK100452	ProteinID:BAF11549.1	ProteinID:BAS83382.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009555	GO:GO:0009653	GO:GO:0009987	GO:GO:0010584
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016787	GO:GO:0016788	GO:GO:0016844
InterPro:IPR011042	EnsemblPlantsGene:Os03g0263600	EnsemblPlants:Os03t0263600-01	PFAM:PF03088	PANTHER:PTHR10426	PANTHER:PTHR10426:SF21
UniProt:Q84Q89	SUPFAM:SSF63829	InterPro:Strictosidine_synth_cons-reg	InterPro:Strictosidine_synthase	TMHMM:TMhelix	UniParc:UPI000018DC01
RefSeq:XP_015630238.1	SEG:seg	:	:	:	:

Description

Six-bladed beta-propeller, TolB-like domain containing protein. (Os03t0263600-01)

Coordinates

chr3:-:8664268..8666146

Molecular Weight (calculated)

47804.1 Da

IEP (calculated)

6.707

GRAVY (calculated)

-0.347

Length

427 amino acids

Sequence
(BLAST)

001: MEEKKQQQQR PQRGRDGILQ YPHLFFAALA LALLLTDPFH LGPLAGVDYR PVRHELAPYR EVMARWPRDN GSRLRHGRLE FVGEVFGPES IEFDRHGRGP
101: YAGLADGRVV RWMGEDAGWE TFAVMSPDWS EKVCANGVES TTKKQHEMER RCGRPLGLRF HGETGELYVA DAYYGLMSVG PNGGVATSLA REVGGSPVNF
201: ANDLDIHRNG SVFFTDTSTR YNRKDHLNVL LEGEGTGRLL RYDPETKAAH VVLSGLVFPN GVQISDDQQF LLFSETTNCR IMRYWLEGPR AGQVEVFADL
301: PGFPDNVRLS SGGGGGRFWV AIDCCRTAAQ EVFAKRPWLR TLYFKLPLTM RTLGKMVSMR MHTLVALLDG EGDVVEVLED RGGEVMRLVS EVREVGRKLW
401: IGTVAHNHIA TIPYPLEEQS SSNVLGD

Best Arabidopsis Sequence Match ( AT3G59530.1 )
(BLAST)

001: MEKKGQHGTY ESMMTHHPIL CIIALSVLFI AIDPFHMSPI GGREFKPVKH EVAPYKEVMG SWPRDNLSRL GNHGKLEFVD QVFGPESLEF DSLGRGPYTG
101: LADGRVVRWM GEAIGWETFS VVTSKWSEEA CVRGVDSTTN KQWKHEKLCG RPLGLRFHKE TGNLYIADAY YGLLVVGPEG GIATPLATHV EGKPILFAND
201: LDIHRNGSIF FTDTSKRYDR ANHFFILLEG ESTGRLLRYD PPTKTTHIVL EGLAFPNGIQ LSKDQSFLLF TETTNCRLVK YWLEGPKMGE VEVVADLPGF
301: PDNVRINEEG QFWVAIDCCR TPAQEVLTNN PWIRSIYFRL PIPMKLLAKT MGMRMYTVIS RFDEEGKVLE VLEDRQGKVM KLWIGTVAHN HIATLPYPLT
401: MNQ

Arabidopsis Description

SSL13Protein STRICTOSIDINE SYNTHASE-LIKE 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1B4]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.