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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:cytosol, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX92652 Canola endoplasmic reticulum, extracellular 99.01 99.01
CDY08948 Canola endoplasmic reticulum, extracellular 94.83 94.83
CDY03419 Canola endoplasmic reticulum, extracellular 94.33 94.33
CDY24847 Canola endoplasmic reticulum, extracellular 94.33 94.33
CDY34310 Canola endoplasmic reticulum, vacuole 94.33 94.33
AT4G24780.1 Thale cress endoplasmic reticulum, extracellular 93.84 93.38
Bra019209.1-P Field mustard endoplasmic reticulum, extracellular 93.35 91.11
KRH03893 Soybean nucleus 84.24 84.24
KRH57176 Soybean nucleus 84.24 84.24
PGSC0003DMT400039385 Potato extracellular 83.25 83.87
Solyc03g111690.2.1 Tomato nucleus 83.0 83.62
KRH63675 Soybean endoplasmic reticulum, extracellular, vacuole 81.28 80.88
CDY18330 Canola cytosol 29.06 80.82
KRH54276 Soybean endoplasmic reticulum, golgi, vacuole 80.54 80.15
PGSC0003DMT400069632 Potato vacuole 79.31 79.51
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 80.05 78.69
Solyc06g071840.1.1 Tomato vacuole 68.72 77.72
CDY56520 Canola extracellular 77.83 77.64
CDY28857 Canola extracellular 77.34 77.15
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 76.85 76.85
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 76.85 76.85
CDY12666 Canola extracellular 76.6 76.6
CDY32557 Canola extracellular 76.35 76.35
CDY70583 Canola cytosol 45.32 75.72
CDY48132 Canola endoplasmic reticulum, golgi 79.31 75.23
CDY16732 Canola endoplasmic reticulum, golgi 79.06 75.0
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 73.89 72.82
CDY65626 Canola golgi 80.3 71.81
CDY20049 Canola plastid, vacuole 72.17 71.12
CDY00156 Canola extracellular, plastid 71.92 70.87
CDY03964 Canola extracellular 71.43 70.39
CDY19932 Canola extracellular 71.67 69.62
CDY56668 Canola extracellular 71.43 69.38
CDY34149 Canola extracellular 60.84 68.8
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 70.44 68.75
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 70.2 68.51
CDY05655 Canola extracellular 69.7 67.87
CDY33938 Canola extracellular 69.7 67.87
CDY01119 Canola endoplasmic reticulum, extracellular 71.18 66.44
CDY47327 Canola endoplasmic reticulum, extracellular 70.69 66.28
CDY46471 Canola endoplasmic reticulum, extracellular 69.7 64.46
CDX89799 Canola extracellular 67.24 63.34
CDY61137 Canola extracellular 66.75 62.88
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 66.5 62.65
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 66.5 62.65
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 68.47 61.1
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 67.98 61.06
CDY18738 Canola endoplasmic reticulum, extracellular 68.72 58.61
CDY66697 Canola endoplasmic reticulum, golgi 63.3 57.49
CDX77400 Canola endoplasmic reticulum, extracellular 69.46 57.32
CDX77470 Canola golgi, plasma membrane 64.04 56.64
CDY06557 Canola extracellular 53.45 56.07
CDY20748 Canola extracellular 53.45 55.93
CDX98092 Canola extracellular 48.28 55.06
CDY30040 Canola extracellular 48.28 55.06
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 43.84 54.43
CDX98091 Canola extracellular 48.52 53.1
CDX70244 Canola vacuole 57.64 53.06
CDY30041 Canola extracellular 48.03 52.56
CDX79122 Canola extracellular 50.0 50.62
CDX78152 Canola extracellular 58.87 50.21
CDX73573 Canola extracellular 58.62 50.0
CDY27438 Canola extracellular 49.75 49.51
CDX76388 Canola extracellular 49.51 49.26
CDX67560 Canola plasma membrane 59.36 49.18
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 58.87 48.68
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 58.87 48.58
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 57.64 47.56
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 54.93 47.55
CDX74293 Canola endoplasmic reticulum, extracellular 54.68 47.13
CDX91953 Canola endoplasmic reticulum, extracellular 54.68 47.13
CDY11284 Canola extracellular, golgi 59.11 47.06
CDY58428 Canola endoplasmic reticulum, golgi, plastid 58.87 46.41
CDX70590 Canola endoplasmic reticulum, extracellular 54.19 46.32
CDX78607 Canola endoplasmic reticulum, extracellular 54.19 46.32
CDY41382 Canola endoplasmic reticulum, golgi 59.61 45.92
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 57.88 45.45
CDY17432 Canola extracellular 51.23 45.32
CDY63769 Canola extracellular 53.45 45.3
CDX85564 Canola extracellular 52.46 45.03
CDY04133 Canola extracellular 50.74 44.88
CDY41679 Canola endoplasmic reticulum, plasma membrane 50.25 44.64
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 50.25 44.54
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 50.25 44.54
CDY09356 Canola extracellular 49.75 44.2
CDY13312 Canola plasma membrane 58.13 44.03
CDY45254 Canola endoplasmic reticulum 49.51 43.89
CDY03043 Canola extracellular 49.51 43.79
CDX69550 Canola endoplasmic reticulum, extracellular 53.69 43.69
CDY66593 Canola endoplasmic reticulum, extracellular 53.69 43.69
CDY39314 Canola extracellular 49.26 43.57
CDY45202 Canola extracellular 49.26 43.57
CDX81636 Canola endoplasmic reticulum 49.26 41.32
CDY53552 Canola extracellular 50.25 41.21
CDY70492 Canola endoplasmic reticulum, extracellular 0.99 7.27
CDX81635 Canola mitochondrion, nucleus 0.74 1.97
CDX96858 Canola mitochondrion, nucleus 0.74 1.97
CDY04136 Canola mitochondrion, nucleus 0.74 1.97
CDY09355 Canola mitochondrion, nucleus 0.74 1.97
CDY41678 Canola mitochondrion, nucleus 0.74 1.97
CDY45199 Canola mitochondrion, nucleus 0.74 1.97
CDY45253 Canola mitochondrion, nucleus 0.74 1.97
CDY53553 Canola mitochondrion, nucleus 0.74 1.97
CDY66531 Canola mitochondrion, nucleus 0.74 1.97
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078FG81UniProt:A0A078FG81InterPro:AmbAllergen
EnsemblPlants:CDY11033ProteinID:CDY11033ProteinID:CDY11033.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00048986001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF28InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMUniPathway:UPA00545UniParc:UPI0004EF339D:
Description
BnaA03g46920DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078FG81]
Coordinates
chrLK032008:-:720442..722295
Molecular Weight (calculated)
44753.1 Da
IEP (calculated)
8.234
GRAVY (calculated)
-0.303
Length
406 amino acids
Sequence
(BLAST)
001: MQTKKLFISI LSFLLYAPLI FSSPVPDPEA IVEEVHKSIN ASVAARRKLG YLSCTTGNPI DDCWRCDPHW ESHRHRLADC AIGFGKNAIG GRDGRIYVVT
101: DSGNDDPVTP KPGTLRHAVV QDEPLWIIFQ RDMTIRLKEE LIMNSFKTID GRGASVHIAG GPCVTIQYVT NIIIHGVHIH DCKRGGNAMV RSSPRHYGWR
201: TVSDGDGVSI FGGSHVWVDH CSLSNCEDGL IDAIMGSTAI TLSNNYMTHH DKVMLLGHSD TYARDKNMQV TIAFNHFGEG LVQRMPRCRH GYFHVVNNDY
301: THWEMYAIGG SANPTINSQG NRFVAPNIRF SKEVTKHEDA PESEWKRWNW RSSGDLLLNG AFFTPSGGAQ SSSYAKASSL GAKPSSLVGP LTVGSGALNC
401: RKGSRC
Best Arabidopsis Sequence Match ( AT4G24780.1 )
(BLAST)
001: MKMQTKKLFI TIVSFLLYAP LFLSSPVPDP ESVVEEVHKS INASVAGRRK LGYLSCTTGN PIDDCWRCDP HWEQHRQRLA DCAIGFGKNA IGGRDGRIYV
101: VTDSGNDNPV SPKPGTLRHA VVQDEPLWII FQRDMTIQLK EELIMNSFKT IDGRGASVHI SGGPCITIQY VTNIIIHGIH IHDCKQGGNA MVRSSPRHFG
201: WRTISDGDGV SIFGGSHVWV DHCSFSNCED GLIDAIMGST AITLSNNHMT HHDKVMLLGH SDTYSRDKNM QVTIAFNHFG EGLVQRMPRC RHGYFHVVNN
301: DYTHWEMYAI GGSANPTINS QGNRFLAPNI RFSKEVTKHE DAPESEWKRW NWRSSGDLLL NGAFFTPSGG AASSSYAKAS SLGAKPSSLV GPLTSTSGAL
401: NCRKGSRC
Arabidopsis Description
Probable pectate lyase 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5M8]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.