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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 6
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra015000.1-P Field mustard golgi, plasma membrane 97.17 99.78
CDY66697 Canola endoplasmic reticulum, golgi 95.64 98.21
AT3G24230.1 Thale cress endoplasmic reticulum, golgi, vacuole 74.95 76.11
HORVU2Hr1G002930.1 Barley cytosol 44.88 75.18
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 72.98 74.11
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 73.42 74.07
VIT_05s0051g00590.t01 Wine grape endoplasmic reticulum, extracellular, golgi 67.54 72.09
GSMUA_Achr11P... Banana cytosol, extracellular, vacuole 55.77 71.11
GSMUA_Achr8P12860_001 Banana cytosol 54.68 71.1
CDY18738 Canola endoplasmic reticulum, extracellular 72.11 69.54
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 62.75 69.23
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 62.75 69.23
CDY33938 Canola extracellular 62.75 69.06
KRG90246 Soybean nucleus 67.32 68.97
GSMUA_Achr5P15620_001 Banana cytosol 52.72 68.95
CDY05655 Canola extracellular 62.53 68.82
CDY19932 Canola extracellular 62.31 68.42
CDY56668 Canola extracellular 62.31 68.42
KRH33474 Soybean nucleus 66.88 68.22
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 64.05 68.21
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 63.83 67.98
GSMUA_Achr4P26690_001 Banana extracellular 54.25 67.85
GSMUA_Achr11P... Banana extracellular 53.59 67.58
CDY61137 Canola extracellular 63.4 67.52
CDY18330 Canola cytosol 21.35 67.12
CDX89799 Canola extracellular 62.96 67.05
Solyc09g091430.2.1 Tomato nucleus 65.8 66.96
PGSC0003DMT400076251 Potato extracellular 64.92 66.52
CDY46471 Canola endoplasmic reticulum, extracellular 62.31 65.15
GSMUA_Achr7P04580_001 Banana endoplasmic reticulum, extracellular 63.4 65.1
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 57.52 65.02
CDY01119 Canola endoplasmic reticulum, extracellular 61.22 64.6
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 57.08 64.53
Zm00001d025067_P001 Maize mitochondrion 63.62 64.32
Zm00001d004448_P001 Maize endoplasmic reticulum 62.75 64.29
CDY11033 Canola endoplasmic reticulum, extracellular 56.64 64.04
CDY12666 Canola extracellular 56.64 64.04
GSMUA_Achr3P00290_001 Banana endoplasmic reticulum, extracellular, vacuole 57.3 63.99
CDY47327 Canola endoplasmic reticulum, extracellular 60.35 63.97
CDY56520 Canola extracellular 56.64 63.88
GSMUA_AchrUn_... Banana endoplasmic reticulum, golgi 63.18 63.88
CDX92652 Canola endoplasmic reticulum, extracellular 56.43 63.79
CDY03419 Canola endoplasmic reticulum, extracellular 56.43 63.79
CDY08948 Canola endoplasmic reticulum, extracellular 56.43 63.79
CDY32557 Canola extracellular 56.43 63.79
CDY34310 Canola endoplasmic reticulum, vacuole 56.43 63.79
CDY70583 Canola cytosol 33.77 63.79
CDY28857 Canola extracellular 56.43 63.64
CDY24847 Canola endoplasmic reticulum, extracellular 56.21 63.55
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 56.64 62.95
TraesCS2D01G018000.1 Wheat golgi 64.05 62.16
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 55.12 61.41
CDY00156 Canola extracellular, plastid 54.68 60.92
KXG25802 Sorghum plastid 64.05 60.74
TraesCS2B01G024500.2 Wheat golgi 63.62 60.71
CDY20049 Canola plastid, vacuole 54.47 60.68
TraesCS2A01G016500.1 Wheat golgi 63.18 60.29
CDY16732 Canola endoplasmic reticulum, golgi 56.21 60.28
CDY48132 Canola endoplasmic reticulum, golgi 55.99 60.05
CDY03964 Canola extracellular 53.81 59.95
CDY34149 Canola extracellular 46.19 59.05
CDX77400 Canola endoplasmic reticulum, extracellular 62.31 58.13
CDY65626 Canola golgi 56.21 56.83
HORVU2Hr1G002880.2 Barley mitochondrion 62.75 56.47
CDX98092 Canola extracellular 42.05 54.21
CDY30040 Canola extracellular 42.05 54.21
CDX98091 Canola extracellular 43.79 54.18
CDY30041 Canola extracellular 43.57 53.91
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 37.25 52.29
CDY06557 Canola extracellular 43.57 51.68
CDY20748 Canola extracellular 43.57 51.55
CDX70244 Canola vacuole 49.24 51.25
CDX78152 Canola extracellular 51.85 50.0
CDX67560 Canola plasma membrane 53.16 49.8
CDX73573 Canola extracellular 51.63 49.79
CDX79122 Canola extracellular 42.27 48.38
CDY27438 Canola extracellular 42.92 48.28
CDX76388 Canola extracellular 42.7 48.04
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 50.76 47.45
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 50.54 47.15
CDX70590 Canola endoplasmic reticulum, extracellular 47.71 46.11
CDX78607 Canola endoplasmic reticulum, extracellular 47.71 46.11
CDX85564 Canola extracellular 47.06 45.67
CDY17432 Canola extracellular 45.53 45.53
CDY11284 Canola extracellular, golgi 50.54 45.49
CDY63769 Canola extracellular 47.28 45.3
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 45.97 44.99
CDY04133 Canola extracellular 44.88 44.88
CDY58428 Canola endoplasmic reticulum, golgi, plastid 50.33 44.85
CDX74293 Canola endoplasmic reticulum, extracellular 45.97 44.8
CDX91953 Canola endoplasmic reticulum, extracellular 45.97 44.8
CDX69550 Canola endoplasmic reticulum, extracellular 48.15 44.29
CDY45202 Canola extracellular 44.23 44.23
CDY13312 Canola plasma membrane 51.63 44.22
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 44.01 44.1
CDY66593 Canola endoplasmic reticulum, extracellular 47.93 44.09
CDY41382 Canola endoplasmic reticulum, golgi 50.54 44.02
CDY03043 Canola extracellular 44.01 44.01
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 43.79 43.89
CDY39314 Canola extracellular 43.79 43.79
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 46.84 43.7
CDY45254 Canola endoplasmic reticulum 43.36 43.45
CDY09356 Canola extracellular 42.92 43.11
CDY41679 Canola endoplasmic reticulum, plasma membrane 42.48 42.67
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 47.28 41.97
CDX81636 Canola endoplasmic reticulum 44.01 41.74
CDY53552 Canola extracellular 44.44 41.21
CDY70492 Canola endoplasmic reticulum, extracellular 4.58 38.18
CDX81635 Canola mitochondrion, nucleus 0.44 1.32
CDX96858 Canola mitochondrion, nucleus 0.44 1.32
CDY04136 Canola mitochondrion, nucleus 0.44 1.32
CDY09355 Canola mitochondrion, nucleus 0.44 1.32
CDY41678 Canola mitochondrion, nucleus 0.44 1.32
CDY45199 Canola mitochondrion, nucleus 0.44 1.32
CDY45253 Canola mitochondrion, nucleus 0.44 1.32
CDY53553 Canola mitochondrion, nucleus 0.44 1.32
CDY66531 Canola mitochondrion, nucleus 0.44 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078CKN3InterPro:AmbAllergenEnsemblPlants:CDX77470
ProteinID:CDX77470ProteinID:CDX77470.1GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0045490EnsemblPlantsGene:GSBRNA2T00128335001InterPro:IPR012334PFAM:PF00544PRINTS:PR00807
PANTHER:PTHR31683PANTHER:PTHR31683:SF63InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656
SUPFAM:SSF51126SignalP:SignalP-TMTMHMM:TMhelixUniPathway:UPA00545UniParc:UPI0004EEC237SEG:seg
Description
BnaA07g06080D
Coordinates
chrLK031811:+:960161..962986
Molecular Weight (calculated)
51118.8 Da
IEP (calculated)
8.762
GRAVY (calculated)
-0.382
Length
459 amino acids
Sequence
(BLAST)
001: MASSSQKLTS ACFVVLLIFV VCVLTATNLR NNQVSLSRKL KTEDSHSFNN STIAIRREGV ELNEHAVADP DQVALLQTRK GKLLTTELHR NEQNITERRK
101: LGFFSCGNGN LIDDCWRCDP NWHMNRKRLA DCGMGFGSNA TGGRDGRFYV VTDPTDEDME FPRSGTLRHA VIQVEPLWII FKRDMVITLK QELIMNSYKT
201: IDARGANVHV ANGACITIQG ITHVIVHGLH IHDCIRTGNA MVRSSPSHYG MRNMSDGDAV SIYASSHIWI DHNSLSKCAD GLVDVVMGST AVTISNNHLT
301: HHNEVMLLGN NDLYTQDKNM KVTIAYNHFG EGLRQRMPRC RHGYFHVVNN DYTHWEMYAI GGSANPTINS QGNRYAAPKN RYAKQVTKRV RTEKSEWKKW
401: NWRSEGDMLV NGAFFIQSGE GATANYESAS SLAAKPASMV GSITSTAGAL GCRSGRPCY
Best Arabidopsis Sequence Match ( AT3G24230.1 )
(BLAST)
001: MATSSLKLTS ACFVLLFIFV GCVLTATNLR NNEISRSRKL KTEDSKSFNS SPMTTRLDGV VELNEHAVTD PDKVAHEVSN LIHMSEQNIT ARRKLGFFSC
101: GNGNLIDDCW RCDRNWNKNR KHLADCGMGF GSKAFGGRNG SYYVVTDHSD DDVVNPKPGT LRHAVIQVEP LWIIFKRDMV IKLKQELIMN SFKTIDARGA
201: NVHIANGACI TIQNITNVIV HGLHIHDCKR TGNVTVRSSP SQAGFRGTAD GDAINIFGSS HIWIDHNSLS NCTDGLVDVV NGSTAITISN NHFTHHDEVM
301: LLGHNDSYTR DKMMQVTVAY NHFGEGLIQR MPRCRHGYFH VVNNDYTHWK MYAIGGSANP TINSQGNRFA APKNHSAKEV TKRLDTKGNE WMEWNWRSEK
401: DLLVNGAFFT PSGEGASGDS QTLSLPAKPA SMVDAITASA GALSCRRGKP CY
Arabidopsis Description
Probable pectate lyase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRM5]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.