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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • endoplasmic reticulum 3
  • extracellular 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, golgi
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Predotar:mitochondrion
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra009469.1-P Field mustard extracellular, plastid, vacuole 95.26 95.8
CDX70244 Canola vacuole 80.08 95.69
CDY11284 Canola extracellular, golgi 86.53 89.41
CDY58428 Canola endoplasmic reticulum, golgi, plastid 86.53 88.54
AT5G04310.1 Thale cress plasma membrane 85.96 87.45
HORVU5Hr1G005000.2 Barley cytosol 42.69 65.98
CDY18330 Canola cytosol 17.84 64.38
Solyc11g008140.1.1 Tomato plasma membrane 54.84 64.37
VIT_13s0019g04910.t01 Wine grape extracellular 60.15 63.91
KRG90767 Soybean extracellular 60.15 63.15
KRH35994 Soybean extracellular 59.2 61.9
PGSC0003DMT400011046 Potato mitochondrion 34.16 61.86
PGSC0003DMT400079776 Potato plasma membrane 57.5 61.84
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 56.93 60.98
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 56.36 60.49
CDY34310 Canola endoplasmic reticulum, vacuole 46.11 59.85
CDX92652 Canola endoplasmic reticulum, extracellular 45.92 59.61
CDY03419 Canola endoplasmic reticulum, extracellular 45.92 59.61
CDY11033 Canola endoplasmic reticulum, extracellular 45.92 59.61
Solyc03g071570.2.1 Tomato endoplasmic reticulum, plasma membrane, vacuole 56.93 59.52
CDY08948 Canola endoplasmic reticulum, extracellular 45.73 59.36
CDY24847 Canola endoplasmic reticulum, extracellular 45.73 59.36
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 55.03 58.94
Solyc05g055510.2.1 Tomato plasma membrane 55.03 58.7
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 44.78 58.13
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 44.78 58.13
CDY56520 Canola extracellular 44.59 57.74
CDY28857 Canola extracellular 44.4 57.49
CDY56668 Canola extracellular 45.54 57.42
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 44.97 57.38
CDY12666 Canola extracellular 44.02 57.14
CDY32557 Canola extracellular 44.02 57.14
CDY19932 Canola extracellular 45.16 56.94
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 44.59 56.49
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 55.41 56.48
CDX78152 Canola extracellular 50.85 56.3
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 44.4 56.25
CDY05655 Canola extracellular 44.4 56.12
CDY33938 Canola extracellular 44.4 56.12
CDX73573 Canola extracellular 50.66 56.09
CDY70583 Canola cytosol 25.81 55.97
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 43.26 55.34
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 45.16 55.22
CDY01119 Canola endoplasmic reticulum, extracellular 45.35 54.94
CDX67560 Canola plasma membrane 51.04 54.9
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 44.78 54.76
CDY00156 Canola extracellular, plastid 42.69 54.61
CDX89799 Canola extracellular 44.59 54.52
CDY47327 Canola endoplasmic reticulum, extracellular 44.78 54.5
CDY20049 Canola plastid, vacuole 42.5 54.37
CDY61137 Canola extracellular 44.4 54.29
CDY16732 Canola endoplasmic reticulum, golgi 43.83 53.97
CDY48132 Canola endoplasmic reticulum, golgi 43.83 53.97
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 33.21 53.52
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 45.54 53.1
CDY46471 Canola endoplasmic reticulum, extracellular 44.21 53.08
CDY03964 Canola extracellular 41.37 52.91
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 45.54 52.75
CDY34149 Canola extracellular 35.86 52.65
CDY65626 Canola golgi 44.78 51.98
CDY66697 Canola endoplasmic reticulum, golgi 43.64 51.45
PGSC0003DMT400060374 Potato extracellular, plasma membrane, vacuole 55.41 51.14
CDY18738 Canola endoplasmic reticulum, extracellular 46.11 51.05
CDX98092 Canola extracellular 34.35 50.84
CDY30040 Canola extracellular 34.35 50.84
CDY06557 Canola extracellular 37.19 50.65
CDX77470 Canola golgi, plasma membrane 44.02 50.54
CDY20748 Canola extracellular 37.19 50.52
CDX98091 Canola extracellular 35.48 50.4
CDX79122 Canola extracellular 37.76 49.63
CDY30041 Canola extracellular 34.91 49.6
CDY13312 Canola plasma membrane 50.09 49.25
CDY27438 Canola extracellular 37.57 48.53
CDX76388 Canola extracellular 37.38 48.28
CDX77400 Canola endoplasmic reticulum, extracellular 44.59 47.76
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 37.19 42.79
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 37.19 42.79
CDY17432 Canola extracellular 36.81 42.27
CDY45254 Canola endoplasmic reticulum 36.62 42.14
CDY04133 Canola extracellular 36.62 42.05
CDY39314 Canola extracellular 36.62 42.05
CDY45202 Canola extracellular 36.62 42.05
CDX74293 Canola endoplasmic reticulum, extracellular 36.81 41.19
CDX91953 Canola endoplasmic reticulum, extracellular 36.81 41.19
CDY03043 Canola extracellular 35.86 41.18
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 36.43 40.94
CDX81636 Canola endoplasmic reticulum 37.57 40.91
CDX78607 Canola endoplasmic reticulum, extracellular 36.62 40.63
CDY53552 Canola extracellular 38.14 40.61
CDY09356 Canola extracellular 35.1 40.48
CDY41679 Canola endoplasmic reticulum, plasma membrane 35.1 40.48
CDX70590 Canola endoplasmic reticulum, extracellular 36.43 40.42
CDY63769 Canola extracellular 36.62 40.29
CDX85564 Canola extracellular 35.86 39.96
CDX69550 Canola endoplasmic reticulum, extracellular 37.19 39.28
CDY66593 Canola endoplasmic reticulum, extracellular 37.19 39.28
CDY70492 Canola endoplasmic reticulum, extracellular 1.14 10.91
CDX81635 Canola mitochondrion, nucleus 1.9 6.58
CDX96858 Canola mitochondrion, nucleus 1.9 6.58
CDY45253 Canola mitochondrion, nucleus 1.9 6.58
CDY53553 Canola mitochondrion, nucleus 1.9 6.58
CDY66531 Canola mitochondrion, nucleus 1.9 6.58
CDY04136 Canola mitochondrion, nucleus 1.71 5.92
CDY09355 Canola mitochondrion, nucleus 1.71 5.92
CDY41678 Canola mitochondrion, nucleus 1.71 5.92
CDY45199 Canola mitochondrion, nucleus 1.71 5.92
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078HU48UniProt:A0A078HU48InterPro:AmbAllergen
EnsemblPlants:CDY41382ProteinID:CDY41382ProteinID:CDY41382.1GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829
GO:GO:0030570GO:GO:0045490GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00072964001InterPro:IPR012334PFAM:PF00544
PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF11InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126UniPathway:UPA00545UniParc:UPI0004EDC005SEG:seg:
Description
BnaCnng10180DPectate lyase [Source:UniProtKB/TrEMBL;Acc:A0A078HU48]
Coordinates
chrLK032497:+:16140..21759
Molecular Weight (calculated)
57183.2 Da
IEP (calculated)
7.098
GRAVY (calculated)
-0.217
Length
527 amino acids
Sequence
(BLAST)
001: MFIMVAHERF HILQKPTCIW IIWVCLLVSL SIHGRASYSY ASSATISTSS SNLSLPHQHP FPEDIVLNVQ RKLNDSLHRR NLLTYQQDDG DTTSSSPIPS
101: CITGNPIDDC WRCDPNWSQN RQRLADCSIG FGQGTLGGKG GRFYLVTDSS DDDAANPIPG TLRHAVIQPE PLWIVFSGDM GIKLRHELIV GSYKTIDGRG
201: ANVQITGHGC LTIQQVSHVI IHNVHVHHCK PSGNTLVASS PTHVGFRGVS DGDGISVSAS HHIWVDHCSL GYCSDGLIDV ILASTAVTIS NNYFHHHDEV
301: MLLGHDDRYT ADTGMQVTIA FNHFGEGLVQ RMPRCRHGYI HVVNNDFTAW EMYAIGGSAN PTINSQGNRY TAPINPNAKE VTKRVDTNEK HWAKWNWRTD
401: GDVMVNGAFF VPSGDGASLA YARATSLQAK AAGFIDQLTV NAGVFGDPSG RNGQGGVFPG ITDGGGTITR GYSKGGPGGG GSDSDGGLFS MIFGSNTNAA
501: SAALRPGQVW SILFTILLNW YFSNHRR
Best Arabidopsis Sequence Match ( AT5G04310.2 )
(BLAST)
001: MVAHERRIHN LQKPTCICII WFCLLVSLSH HGRASSTSAS IFNLSLPHQH PFPEHVVLNV QRKLNDSLSR RQLLTYQQDD GTTASSPIPS CITGNPIDDC
101: WRCDPNWSAN RQRLADCSIG FGQGTLGGKG GQFYLVTDSS DNDAANPIPG TLRHAVIQPE PLWIIFSSDM GIKLKHELII GSYKTIDGRG TNIQITGHGC
201: LTIQQVSHVI IHNVHIHHCK PSGNTLVASS PTHVGFRGVS DGDGISVSAS HHIWVDHCSL GYCADGLIDV ILASTAVTIS NNYFSHHDEV MLLGHDDRYT
301: ADKGMQVTIA FNHFGEGLVQ RMPRCRHGYI HVVNNDFTAW EMYAIGGSAS PTINSQGNRY TAPIDPNAKE VTKRVDSNEK HWSGWNWRTE GDVMVNGAFF
401: VPSGDGVSPA YARATSVQPK AAAIIDQLTV NAGVFGDPSG RNGQGGSFPG ITNGGGTITR GYSKSGPAGG GSGSDSDDGL FTLIFGNNSG AVALRPGQVW
501: SILLIIILYW YIPHHTRS
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:F4JW80]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.