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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 6
  • vacuole 6
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra013585.1-P Field mustard extracellular 97.25 80.92
CDX79122 Canola extracellular 96.64 78.8
AT4G22080.1 Thale cress extracellular 91.13 75.63
CDX76388 Canola extracellular 91.44 73.28
CDY27438 Canola extracellular 90.83 72.79
AT4G22090.1 Thale cress extracellular 87.16 72.33
CDX98091 Canola extracellular 62.69 55.26
CDY30041 Canola extracellular 62.39 54.99
CDY30040 Canola extracellular 58.72 53.93
PGSC0003DMT400042396 Potato endoplasmic reticulum, extracellular, vacuole 64.83 53.4
CDX98092 Canola extracellular 58.1 53.37
CDY70583 Canola cytosol 37.31 50.21
CDY08948 Canola endoplasmic reticulum, extracellular 55.96 45.07
CDY34310 Canola endoplasmic reticulum, vacuole 55.96 45.07
CDY24847 Canola endoplasmic reticulum, extracellular 55.66 44.83
CDY03419 Canola endoplasmic reticulum, extracellular 55.35 44.58
CDY12666 Canola extracellular 55.05 44.34
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 55.05 44.34
CDY32557 Canola extracellular 55.05 44.34
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 55.05 44.34
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 55.96 44.31
CDY11033 Canola endoplasmic reticulum, extracellular 54.43 43.84
CDY28857 Canola extracellular 54.43 43.73
CDX92652 Canola endoplasmic reticulum, extracellular 54.13 43.6
CDY56520 Canola extracellular 54.13 43.49
CDY33938 Canola extracellular 55.35 43.41
CDY05655 Canola extracellular 55.35 43.41
CDY56668 Canola extracellular 55.35 43.3
CDY19932 Canola extracellular 55.05 43.06
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 54.43 42.79
CDY00156 Canola extracellular, plastid 53.82 42.72
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 54.13 42.55
CDY20049 Canola plastid, vacuole 53.52 42.48
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 53.52 42.48
CDY03964 Canola extracellular 53.21 42.23
CDY20748 Canola extracellular 49.54 41.75
CDY06557 Canola extracellular 49.24 41.6
CDY48132 Canola endoplasmic reticulum, golgi 54.43 41.59
CDX89799 Canola extracellular 54.74 41.53
CDY61137 Canola extracellular 54.74 41.53
CDY16732 Canola endoplasmic reticulum, golgi 54.13 41.36
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 53.82 40.84
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 53.82 40.84
CDY47327 Canola endoplasmic reticulum, extracellular 53.52 40.42
CDY65626 Canola golgi 55.96 40.31
CDY46471 Canola endoplasmic reticulum, extracellular 53.82 40.09
CDY01119 Canola endoplasmic reticulum, extracellular 53.21 40.0
CDY34149 Canola extracellular 42.2 38.44
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 52.91 38.27
CDY66697 Canola endoplasmic reticulum, golgi 52.29 38.26
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 53.21 38.24
CDX70244 Canola vacuole 51.38 38.1
CDY18330 Canola cytosol 16.82 37.67
CDX77470 Canola golgi, plasma membrane 52.29 37.25
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 54.74 36.38
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 54.13 36.05
CDY18738 Canola endoplasmic reticulum, extracellular 52.29 35.92
CDX77400 Canola endoplasmic reticulum, extracellular 53.52 35.57
CDX73573 Canola extracellular 51.07 35.08
CDX78152 Canola extracellular 51.07 35.08
CDY17432 Canola extracellular 48.93 34.86
CDY04133 Canola extracellular 48.93 34.86
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 49.54 34.54
CDX74293 Canola endoplasmic reticulum, extracellular 49.54 34.39
CDX91953 Canola endoplasmic reticulum, extracellular 49.54 34.39
CDX67560 Canola plasma membrane 51.07 34.08
CDX85564 Canola extracellular 49.24 34.04
CDY45202 Canola extracellular 47.4 33.77
CDY11284 Canola extracellular, golgi 52.6 33.73
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 50.46 33.54
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 46.79 33.41
CDY39314 Canola extracellular 46.79 33.33
CDY41382 Canola endoplasmic reticulum, golgi 53.52 33.21
CDY58428 Canola endoplasmic reticulum, golgi, plastid 52.29 33.2
CDY03043 Canola extracellular 46.48 33.12
CDY63769 Canola extracellular 48.32 32.99
CDY45254 Canola endoplasmic reticulum 46.18 32.97
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 46.18 32.97
CDX70590 Canola endoplasmic reticulum, extracellular 47.71 32.84
CDY09356 Canola extracellular 45.87 32.82
CDY41679 Canola endoplasmic reticulum, plasma membrane 45.87 32.82
CDX78607 Canola endoplasmic reticulum, extracellular 47.4 32.63
CDY66593 Canola endoplasmic reticulum, extracellular 49.54 32.46
CDX69550 Canola endoplasmic reticulum, extracellular 49.54 32.46
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 50.76 32.11
CDX81636 Canola endoplasmic reticulum 47.09 31.82
CDY53552 Canola extracellular 47.71 31.52
CDY13312 Canola plasma membrane 50.15 30.6
CDY70492 Canola endoplasmic reticulum, extracellular 0.61 3.64
CDX81635 Canola mitochondrion, nucleus 0.0 0.0
CDY53553 Canola mitochondrion, nucleus 0.0 0.0
CDX96858 Canola mitochondrion, nucleus 0.0 0.0
CDY66531 Canola mitochondrion, nucleus 0.0 0.0
CDY45253 Canola mitochondrion, nucleus 0.0 0.0
CDY45199 Canola mitochondrion, nucleus 0.0 0.0
CDY41678 Canola mitochondrion, nucleus 0.0 0.0
CDY09355 Canola mitochondrion, nucleus 0.0 0.0
CDY04136 Canola mitochondrion, nucleus 0.0 0.0
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078D196InterPro:AmbAllergenEnsemblPlants:CDX82902
ProteinID:CDX82902ProteinID:CDX82902.1GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0045490EnsemblPlantsGene:GSBRNA2T00138280001InterPro:IPR012334PFAM:PF00544PRINTS:PR00807
PANTHER:PTHR31683PANTHER:PTHR31683:SF18InterPro:Pec_lyaseInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656
SUPFAM:SSF51126SignalP:SignalP-noTMUniPathway:UPA00545UniParc:UPI0004EE70DF::
Description
BnaC01g13520D
Coordinates
chrLK031830:-:1224747..1225932
Molecular Weight (calculated)
36059.0 Da
IEP (calculated)
7.781
GRAVY (calculated)
-0.137
Length
327 amino acids
Sequence
(BLAST)
001: MTPFFILCLS VTLFLCQSLV RAINNGYYGY NPVASYLPEK PQNIMNPVDS CWRLKSDWTA NRKDLADCAV GFGSSALGGK KGSIYVVTNP NDNAANPQPG
101: SLRYGVIQDK PLWITFAKDM VLTLENELMV NSYKTIDGRG AKVEIAYGPC ITIQEVTNVI VHGIRIHDCK PGKYGMVRSS TTHVGHRKGS DGDAIAISGS
201: SNIWIDHCYL ASCTDGLIDV IHASTGITIS NNYFTQHDKV MLLGHNDDFV QDVKMKVTVA FNHFGPGLVE RMPRVRRGYA HVANNRYDKW IMYAIGGSAD
301: PTIFSEGNYF IASDNSNSKE VFFTVSS
Best Arabidopsis Sequence Match ( AT4G22080.1 )
(BLAST)
001: MTLFTVSCLL VVLFLCHSLV HAENNGYYGY TPTVANYLPE KPQNIMNPVD SCWRLKSDWA ANRKDLADCV VGFGSSTLGG KKGNLYVVTN PYDNAQNPQP
101: GSLRYGVIQA KPLWITFAKD MVITLENELM VNSYKTIDGR GAKVEIAYGP CITIQDVTNV IVHGISIHDC KPGKYGMVRS SPTHVGHRKG SDGDAIAIFG
201: SSNIWIDHCY LASCTDGLID VIHASTGITI SNNYFTQHDK VMLLGHNDDF VQDVKMKVTV AFNHFGPGLV ERMPRVRRGY AHVANNRYDK WIMYAIGGSA
301: DPTIFSEGNY FIASDKSNSK EVTKREVKGG WNNWRWRTSK DVFKNGAYFV PSGYGSISLP YSSAQRFTVA PGNLVPSLTA DAGPLNCNRN GPCY
Arabidopsis Description
RHS14Probable pectate lyase 16 [Source:UniProtKB/Swiss-Prot;Acc:O65456]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.