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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra023504.1-P Field mustard extracellular 99.79 98.13
CDY63769 Canola extracellular 97.46 96.24
AT5G15110.1 Thale cress endoplasmic reticulum, extracellular 85.62 85.81
CDX70590 Canola endoplasmic reticulum, extracellular 84.36 84.0
CDX78607 Canola endoplasmic reticulum, extracellular 84.36 84.0
CDX69550 Canola endoplasmic reticulum, extracellular 85.62 81.16
CDY66593 Canola endoplasmic reticulum, extracellular 85.62 81.16
CDX74293 Canola endoplasmic reticulum, extracellular 78.01 78.34
CDX91953 Canola endoplasmic reticulum, extracellular 78.01 78.34
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 77.17 77.83
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 56.87 61.28
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 56.24 60.05
GSMUA_Achr10P... Banana cytosol 43.76 59.83
TraesCS4A01G385700.1 Wheat cytosol 27.48 59.36
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 53.49 57.89
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 54.12 57.79
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 52.22 56.39
KRH18498 Soybean endoplasmic reticulum, extracellular, vacuole 52.43 55.98
GSMUA_Achr10P... Banana extracellular 46.09 55.9
KRG93502 Soybean extracellular 52.01 55.53
PGSC0003DMT400003310 Potato extracellular 52.22 55.38
Solyc02g087670.2.1 Tomato extracellular 52.01 55.16
PGSC0003DMT400017863 Potato extracellular 51.16 54.75
CDY05655 Canola extracellular 48.2 54.68
CDY33938 Canola extracellular 48.2 54.68
PGSC0003DMT400014086 Potato extracellular 51.37 54.36
Solyc03g058890.2.1 Tomato extracellular 51.59 54.34
CDY19932 Canola extracellular 47.78 54.07
CDY56668 Canola extracellular 47.78 54.07
KRH01130 Soybean extracellular 49.89 53.64
CDY28857 Canola extracellular 46.09 53.56
CDY56520 Canola extracellular 46.09 53.56
CDY70583 Canola cytosol 27.48 53.5
CDY12666 Canola extracellular 45.67 53.2
CDY32557 Canola extracellular 45.67 53.2
CDY05305 Canola endoplasmic reticulum, extracellular, vacuole 46.72 53.12
CDY24654 Canola endoplasmic reticulum, extracellular, vacuole 46.72 53.12
CDY03419 Canola endoplasmic reticulum, extracellular 45.45 52.96
OQU75805 Sorghum mitochondrion 49.47 52.94
TraesCS7A01G086600.1 Wheat endoplasmic reticulum, extracellular 50.11 52.9
Os06t0144200-01 Rice extracellular, plasma membrane 50.32 52.89
HORVU6Hr1G038630.1 Barley extracellular 45.24 52.84
CDY09356 Canola extracellular 50.95 52.74
CDY41679 Canola endoplasmic reticulum, plasma membrane 50.95 52.74
CDY04133 Canola extracellular 51.16 52.72
CDY17432 Canola extracellular 51.16 52.72
CDY34310 Canola endoplasmic reticulum, vacuole 45.24 52.71
CDY56220 Canola endoplasmic reticulum, extracellular, vacuole 45.24 52.71
EER88571 Sorghum endoplasmic reticulum, plasma membrane 50.53 52.64
EES06507 Sorghum golgi, vacuole 49.47 52.58
CDY03043 Canola extracellular 50.95 52.51
Os02t0214400-01 Rice plasma membrane 49.47 52.47
CDY11033 Canola endoplasmic reticulum, extracellular 45.03 52.46
CDY41506 Canola endoplasmic reticulum, extracellular, vacuole 45.67 52.3
Zm00001d000216_P001 Maize golgi, vacuole 48.41 52.28
Os06t0583900-01 Rice plasma membrane 49.47 52.23
CDY01846 Canola endoplasmic reticulum, extracellular, vacuole 44.82 52.22
CDY20049 Canola plastid, vacuole 45.45 52.18
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 50.53 52.18
CDY45202 Canola extracellular 50.53 52.07
CDY18330 Canola cytosol 16.07 52.05
CDX92652 Canola endoplasmic reticulum, extracellular 44.61 51.97
CDX83690 Canola endoplasmic reticulum, extracellular, vacuole 45.24 51.94
CDY00156 Canola extracellular, plastid 45.24 51.94
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 43.55 51.89
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 50.11 51.75
CDY08948 Canola endoplasmic reticulum, extracellular 44.4 51.72
CDY24847 Canola endoplasmic reticulum, extracellular 44.4 51.72
CDY03964 Canola extracellular 45.03 51.7
TraesCS6D01G170500.1 Wheat golgi 46.3 51.53
CDX86615 Canola endoplasmic reticulum, extracellular, golgi 46.93 51.51
CDY15517 Canola endoplasmic reticulum, extracellular, golgi 46.93 51.51
CDY45254 Canola endoplasmic reticulum 49.68 51.31
CDY61137 Canola extracellular 46.72 51.28
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 46.93 51.27
CDY46471 Canola endoplasmic reticulum, extracellular 47.57 51.25
CDX89799 Canola extracellular 46.51 51.04
CDY39314 Canola extracellular 49.47 50.98
TraesCS6B01G211900.1 Wheat extracellular, golgi, vacuole 45.67 50.82
CDY01119 Canola endoplasmic reticulum, extracellular 46.72 50.8
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 47.57 50.68
TraesCS7D01G356700.1 Wheat extracellular 47.57 50.68
CDX81636 Canola endoplasmic reticulum 51.8 50.62
CDY47327 Canola endoplasmic reticulum, extracellular 46.3 50.58
CDY48132 Canola endoplasmic reticulum, golgi 45.67 50.47
HORVU7Hr1G085860.1 Barley endoplasmic reticulum, extracellular, vacuole 47.36 50.45
CDY16732 Canola endoplasmic reticulum, golgi 45.45 50.23
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 47.15 50.23
CDY34149 Canola extracellular 38.05 50.14
EER87830 Sorghum endoplasmic reticulum, extracellular, vacuole 49.26 50.11
Os06t0144900-01 Rice mitochondrion 50.11 50.11
CDX98092 Canola extracellular 37.63 50.0
PGSC0003DMT400014085 Potato extracellular, golgi 42.07 50.0
Solyc03g058910.2.1 Tomato extracellular, golgi 42.07 50.0
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 47.57 49.67
CDY53552 Canola extracellular 51.8 49.49
CDY53564 Canola endoplasmic reticulum, extracellular, vacuole 47.57 49.45
CDY30040 Canola extracellular 37.21 49.44
CDY01151 Canola endoplasmic reticulum, extracellular, vacuole 47.15 49.34
CDX82902 Canola endoplasmic reticulum, extracellular, vacuole 34.04 49.24
CDX98091 Canola extracellular 38.05 48.52
Zm00001d036945_P001 Maize endoplasmic reticulum 42.92 48.33
CDY66697 Canola endoplasmic reticulum, golgi 45.67 48.32
CDY30041 Canola extracellular 37.63 47.98
CDY65626 Canola golgi 45.88 47.8
TraesCS6A01G184500.2 Wheat extracellular, golgi, vacuole 46.72 47.73
CDY18738 Canola endoplasmic reticulum, extracellular 47.99 47.69
CDX77470 Canola golgi, plasma membrane 45.67 47.06
HORVU7Hr1G019500.1 Barley mitochondrion 51.59 46.92
CDX79122 Canola extracellular 39.11 46.13
CDX77400 Canola endoplasmic reticulum, extracellular 47.15 45.33
CDX76388 Canola extracellular 38.48 44.61
CDY27438 Canola extracellular 38.48 44.61
CDY20748 Canola extracellular 35.73 43.56
CDY06557 Canola extracellular 35.52 43.41
CDX70244 Canola vacuole 39.75 42.63
CDX73573 Canola extracellular 41.44 41.18
CDX78152 Canola extracellular 41.23 40.97
CDX67560 Canola plasma membrane 42.28 40.82
CDX67615 Canola endoplasmic reticulum, extracellular, vacuole 41.86 40.33
CDY07515 Canola endoplasmic reticulum, extracellular, vacuole 41.86 40.24
CDY56964 Canola endoplasmic reticulum, extracellular, vacuole 41.44 39.84
CDY11284 Canola extracellular, golgi 40.8 37.84
CDX73426 Canola endoplasmic reticulum, extracellular, vacuole 41.23 37.72
GSMUA_Achr7P08840_001 Banana nucleus 53.07 37.46
CDY58428 Canola endoplasmic reticulum, golgi, plastid 40.17 36.89
CDY13312 Canola plasma membrane 41.65 36.75
CDY41382 Canola endoplasmic reticulum, golgi 39.96 35.86
Solyc02g067450.2.1 Tomato extracellular 46.3 35.55
CDY70492 Canola endoplasmic reticulum, extracellular 1.27 10.91
CDX81635 Canola mitochondrion, nucleus 0.42 1.32
CDX96858 Canola mitochondrion, nucleus 0.42 1.32
CDY04136 Canola mitochondrion, nucleus 0.42 1.32
CDY09355 Canola mitochondrion, nucleus 0.42 1.32
CDY41678 Canola mitochondrion, nucleus 0.42 1.32
CDY45199 Canola mitochondrion, nucleus 0.42 1.32
CDY45253 Canola mitochondrion, nucleus 0.42 1.32
CDY53553 Canola mitochondrion, nucleus 0.42 1.32
CDY66531 Canola mitochondrion, nucleus 0.42 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2GO:A0A078DB85InterPro:AmbAllergenEnsemblPlants:CDX85564
ProteinID:CDX85564ProteinID:CDX85564.1GO:GO:0003674GO:GO:0003824GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0030570GO:GO:0045490EnsemblPlantsGene:GSBRNA2T00143284001
InterPro:IPR012334PFAM:PF00544PFAM:PF04431PRINTS:PR00807PANTHER:PTHR31683PANTHER:PTHR31683:SF7
InterPro:Pec_lyaseInterPro:Pec_lyase_NInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00656SUPFAM:SSF51126
SignalP:SignalP-noTMUniPathway:UPA00545UniParc:UPI0004EDE8F7SEG:seg::
Description
BnaA02g02490D
Coordinates
chrLK031842:-:678530..680748
Molecular Weight (calculated)
54406.2 Da
IEP (calculated)
9.466
GRAVY (calculated)
-0.595
Length
473 amino acids
Sequence
(BLAST)
001: MEMTRLLKLM FTFYIAGLIP TIRANLSELD EYWSKRAGEA REFTLQAYHS NPYEVVDHFH ERHYDNSTDV KETEEDSDDE KPEEVEDDVI EMVGNEMNST
101: RRILRGKRKG KWSKLKGPCT ASNPIDKCWR CRSNWAKRRK NLVKCVRGFG HSTIGGKRGR IYVVTSNLDE DMVNPKPGTL RHAVIQKEPL WIIFKNDMHI
201: RLSQELMICS FKTIDARGTD VHIAHGAGIT IQFVRHVIIH GLRIHHICQS NGGMIRDSTD HFGMRTKADG DGISIYGSSM IWLDHISMSK CQDGLIDAIV
301: GSTAITISNS HFTHHNDVML LGAQNDNQGD KKMQVTVAYN HFGKGLVQRM PRIRWGFVHV VNNDYTHWEL YAIGGSQAPT ILSHGNRFIA PPHKPHYREV
401: TKRDYASEHE WKHWNWRSDK DMFMNGAYFR QSGNPHFKCH HTRKQMIKPK HGIAVSMLTK YAGALDCRVG KRC
Best Arabidopsis Sequence Match ( AT5G15110.1 )
(BLAST)
001: MEMVRLSKLM FTFCIAVLIP TIRGNISELD EYWSQRADEA REFTLQAYHS DPYEIVDHFH ERHYDNSTDV TTPEEDGDAK PEEEEKEFIE MLGSSTNSTR
101: RSLRGKGKGK WSKLKGPCTA SNPIDKCWRC RSDWAKRRKK LTRCVRGFGH RTTGGKRGRI YVVTSNLDED MVNPKPGTLR HAVIQKEPLW IIFKNDMSIR
201: LNQELLINSH KTIDARGANV HVAHGAGITM QFVKNVVIHG LHIHHISESS GGMIRDSVDH FGMRTRADGD GLSIYGSSNI WLDHISMSKC QDGLIDAIVG
301: STGITISNSH FTHHNDVMLL GAQNTNEADK HMQVTVAYNH FGKGLVQRMP RIRWGFVHVV NNDYTHWELY AIGGSQGPTI LSHGNRFIAP PHKPHYREVT
401: KRDYASEDEW KHWNWRSDKD VFMNGAYFRQ SGNPQYKCAH TRQQMIKPKN GLAVSKLTKY AGALDCRVGR RC
Arabidopsis Description
Pectate lyase family protein [Source:TAIR;Acc:AT5G15110]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.