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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 6
  • golgi 6
  • nucleus 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, plastid, secretory
BaCelLo:secretory
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:extracellular, golgi, nucleus, plasma membrane, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400014086 Potato extracellular 78.05 77.18
PGSC0003DMT400003310 Potato extracellular 71.27 70.63
PGSC0003DMT400083135 Potato extracellular 59.05 60.0
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 59.05 59.45
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 58.82 58.69
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 57.47 58.12
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 57.24 57.76
PGSC0003DMT400046723 Potato endoplasmic reticulum, golgi, vacuole 56.79 57.7
TraesCS4A01G385700.1 Wheat cytosol 28.28 57.08
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 51.13 56.93
KRH74782 Soybean extracellular 57.69 56.92
KRH69345 Soybean extracellular 57.24 56.6
KRH45851 Soybean extracellular 57.69 56.54
GSMUA_Achr10P... Banana cytosol 43.89 56.07
GSMUA_Achr10P... Banana extracellular 49.32 55.9
PGSC0003DMT400039385 Potato extracellular 50.91 55.83
PGSC0003DMT400027955 Potato extracellular 50.45 55.61
AT1G14420.1 Thale cress endoplasmic reticulum 57.47 55.34
PGSC0003DMT400069632 Potato vacuole 50.23 54.81
PGSC0003DMT400032910 Potato endoplasmic reticulum, extracellular, vacuole 49.77 54.59
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 53.39 54.5
Bra026832.1-P Field mustard extracellular 55.66 54.42
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 54.3 54.18
HORVU6Hr1G038630.1 Barley extracellular 49.55 54.07
CDY04133 Canola extracellular 56.11 54.03
Os06t0583900-01 Rice plasma membrane 54.75 54.02
Bra017412.1-P Field mustard extracellular 55.88 53.81
KRH18498 Soybean endoplasmic reticulum, extracellular, vacuole 53.85 53.72
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 55.66 53.71
PGSC0003DMT400014085 Potato extracellular, golgi 48.19 53.52
Bra016700.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 55.43 53.49
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 55.43 53.49
TraesCS7D01G356700.1 Wheat extracellular 53.62 53.38
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 53.62 53.38
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 53.62 53.38
CDY17432 Canola extracellular 55.43 53.38
Zm00001d000216_P001 Maize golgi, vacuole 52.71 53.2
KRH01130 Soybean extracellular 52.94 53.18
Bra024811.1-P Field mustard extracellular 55.2 53.16
CDY45202 Canola extracellular 55.2 53.16
HORVU7Hr1G085860.1 Barley endoplasmic reticulum, extracellular, vacuole 53.39 53.15
PGSC0003DMT400002241 Potato extracellular 52.71 53.08
Bra026221.1-P Field mustard endoplasmic reticulum 54.98 53.06
EES06507 Sorghum golgi, vacuole 53.39 53.03
AT2G02720.1 Thale cress extracellular, vacuole 54.52 52.97
Bra026583.1-P Field mustard endoplasmic reticulum, plasma membrane 54.75 52.95
CDY03043 Canola extracellular 54.98 52.94
KRG93502 Soybean extracellular 52.94 52.82
CDY39314 Canola extracellular 54.75 52.72
Os02t0214400-01 Rice plasma membrane 53.17 52.69
EER88571 Sorghum endoplasmic reticulum, plasma membrane 54.07 52.64
OQU75805 Sorghum mitochondrion 52.49 52.49
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 55.2 52.03
Os06t0144200-01 Rice extracellular, plasma membrane 52.71 51.78
AT5G15110.1 Thale cress endoplasmic reticulum, extracellular 54.98 51.48
CDX74293 Canola endoplasmic reticulum, extracellular 54.75 51.38
CDX91953 Canola endoplasmic reticulum, extracellular 54.75 51.38
Bra006279.1-P Field mustard endoplasmic reticulum, extracellular 55.2 51.37
CDX70590 Canola endoplasmic reticulum, extracellular 55.2 51.37
CDX78607 Canola endoplasmic reticulum, extracellular 55.2 51.37
CDX85564 Canola extracellular 54.75 51.16
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 52.26 50.99
Bra001011.1-P Field mustard endoplasmic reticulum, extracellular 54.07 50.74
AT3G01270.1 Thale cress endoplasmic reticulum, extracellular 54.52 50.74
CDY66593 Canola endoplasmic reticulum, extracellular 57.24 50.7
Bra023504.1-P Field mustard extracellular 54.98 50.52
Bra008721.1-P Field mustard endoplasmic reticulum, extracellular 57.01 50.5
CDX69550 Canola endoplasmic reticulum, extracellular 57.01 50.5
CDX81636 Canola endoplasmic reticulum 55.2 50.41
CDY63769 Canola extracellular 54.52 50.31
TraesCS6D01G170500.1 Wheat golgi 48.19 50.12
TraesCS7A01G086600.1 Wheat endoplasmic reticulum, extracellular 50.68 50.0
PGSC0003DMT400045436 Potato extracellular 51.81 49.89
TraesCS6B01G211900.1 Wheat extracellular, golgi, vacuole 47.96 49.88
PGSC0003DMT400040893 Potato endoplasmic reticulum, vacuole 49.32 49.66
Os06t0144900-01 Rice mitochondrion 52.94 49.47
EER87830 Sorghum endoplasmic reticulum, extracellular, vacuole 52.04 49.46
CDY53552 Canola extracellular 55.2 49.29
Zm00001d036945_P001 Maize endoplasmic reticulum 45.7 48.1
PGSC0003DMT400009869 Potato cytosol 46.15 47.89
PGSC0003DMT400076251 Potato extracellular 48.19 47.54
PGSC0003DMT400051938 Potato endoplasmic reticulum, extracellular 48.87 46.96
TraesCS6A01G184500.2 Wheat extracellular, golgi, vacuole 47.74 45.57
PGSC0003DMT400011046 Potato mitochondrion 29.86 45.36
PGSC0003DMT400042395 Potato extracellular 38.46 44.62
PGSC0003DMT400042396 Potato endoplasmic reticulum, extracellular, vacuole 39.82 44.33
HORVU7Hr1G019500.1 Barley mitochondrion 51.81 44.04
PGSC0003DMT400079776 Potato plasma membrane 47.06 42.45
GSMUA_Achr7P08840_001 Banana nucleus 56.79 37.46
PGSC0003DMT400060374 Potato extracellular, plasma membrane, vacuole 46.15 35.73
CDY04136 Canola mitochondrion, nucleus 0.45 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2InterPro:AmbAllergenGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987
GO:GO:0016829GO:GO:0030570GO:GO:0045490GO:GO:0046872InterPro:IPR012334UniProt:M1A9L8
PFAM:PF00544PFAM:PF04431EnsemblPlantsGene:PGSC0003DMG400006938PGSC:PGSC0003DMG400006938EnsemblPlants:PGSC0003DMT400017863PRINTS:PR00807
PANTHER:PTHR31683PANTHER:PTHR31683:SF7InterPro:Pec_lyaseInterPro:Pec_lyase_NInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000295AF57SEG:seg
Description
Pectate lyase P59 [Source:PGSC_GENE;Acc:PGSC0003DMG400006938]
Coordinates
chr2:-:26017220..26019334
Molecular Weight (calculated)
49959.4 Da
IEP (calculated)
7.629
GRAVY (calculated)
-0.425
Length
442 amino acids
Sequence
(BLAST)
001: MTHSLFVLFF VFGAIIPAFN AHIGDFDEVW RRRAEEAMKF TIQTYESEPA NITLAFNQKT RDSVKELSAV VSKNETRREL GTKKYEGPCT VTNPIDKCWR
101: CDPNWADNRK KLVECSMGFG YKTTGGRDGK YYVVSDSSDD YTTPKPGTLR HAVIQKEPLW IIFDRNMKIK LHQELIMQGD KTIDGRGATV HITGGASIMI
201: QYTKNVIIHG LHIHDIVEGN GGMVRDAVDH IGFRTKSDGD GISIFGSSNI WIDHMSMENC YDGIIDAVEG STGITISNGH YTDHNEVMLF GASDSSSIDQ
301: KMQITLAFNH FGKRLVQRMP RCRWGYIHVV NNDYTHWNMY AIGGSKNPTI ISQGNRFIAP PDIFKKQITK REYSPESVWM QWTWRSEGDL YMNGAYFVQA
401: GDPDWSKKHQ NLYDGIAAAP ADQVTWMTRF AGALNCKVGK AC
Best Arabidopsis Sequence Match ( AT1G14420.1 )
(BLAST)
001: MAAAFLNLGG YVFVFFSSFL AIVAPQVRGN VAVFDSYWTQ RQSDALKQTI GSYDPHPLNV TNHFNYHVNI AVDASESRND TRRELTQVRS GRKTHKSSGK
101: CLAYNPIDNC WRCDRNWANN RKKLADCVLG FGRRTTGGKD GPIYVVKDAS DNDLINPKPG TLRHAVTRDG PLWIIFARSM IIKLQQELMI TSDKTIDGRG
201: ARVYIMEGAG LTLQFVNNVI IHNIYVKHIV PGNGGLIRDS EAHIGLRTKS DGDGISLFGA TNIWIDHVSM TRCADGMIDA IDGSTAVTIS NSHFTDHQEV
301: MLFGARDEHV IDKKMQITVA FNHFGKRLEQ RMPRCRYGTI HVVNNDYTHW EMYAIGGNMN PTIISQGNRF IAPPNEEAKQ ITKREYTPYG EWKSWNWQSE
401: GDYFLNGAYF VQSGKANAWS SKPKTPLPNK FTIRPKPGTM VRKLTMDAGV LGCKLGEAC
Arabidopsis Description
AT59Probable pectate lyase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S2]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.