Factsheet for Bra026221.1-P

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 7
endoplasmic reticulum 7
vacuole 5
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular, plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39314	Canola	extracellular	98.69	98.47
Bra016700.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	85.37	85.37
Bra026832.1-P	Field mustard	extracellular	82.97	84.07
AT1G14420.1	Thale cress	endoplasmic reticulum	83.19	83.01
Bra026583.1-P	Field mustard	endoplasmic reticulum, plasma membrane	73.8	73.96
Bra024811.1-P	Field mustard	extracellular	71.83	71.68
Bra017412.1-P	Field mustard	extracellular	71.83	71.68
VIT_14s0108g00030.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	56.33	58.77
KRH45851	Soybean	extracellular	57.21	58.09
TraesCS4A01G385700.1	Wheat	cytosol	27.73	57.99
VIT_01s0026g01670.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	55.02	56.88
KRH74782	Soybean	extracellular	55.24	56.47
GSMUA_Achr2P16830_001	Banana	endoplasmic reticulum, extracellular	53.93	56.39
GSMUA_Achr6P00830_001	Banana	endoplasmic reticulum, extracellular	53.71	56.29
Zm00001d000216_P001	Maize	golgi, vacuole	53.71	56.16
KRH69345	Soybean	extracellular	54.15	55.48
GSMUA_Achr10P...	Banana	extracellular	47.16	55.38
PGSC0003DMT400017863	Potato	extracellular	53.06	54.98
Solyc03g058890.2.1	Tomato	extracellular	53.71	54.79
OQU75805	Sorghum	mitochondrion	52.62	54.52
GSMUA_Achr10P...	Banana	cytosol	41.05	54.34
PGSC0003DMT400014086	Potato	extracellular	52.62	53.91
VIT_01s0026g01680.t01	Wine grape	endoplasmic reticulum, extracellular	51.97	53.72
TraesCS7A01G086600.1	Wheat	endoplasmic reticulum, extracellular	52.4	53.57
Zm00001d046389_P007	Maize	endoplasmic reticulum, extracellular	50.22	53.12
EER88571	Sorghum	endoplasmic reticulum, plasma membrane	52.62	53.08
Os06t0144200-01	Rice	extracellular, plasma membrane	51.97	52.89
EES06507	Sorghum	golgi, vacuole	51.31	52.81
TraesCS7D01G356700.1	Wheat	extracellular	51.09	52.7
TraesCS7B01G261700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	51.09	52.7
PGSC0003DMT400003310	Potato	extracellular	51.31	52.69
Solyc02g087670.2.1	Tomato	extracellular	51.31	52.69
Os06t0583900-01	Rice	plasma membrane	51.53	52.68
PGSC0003DMT400017862	Potato	endoplasmic reticulum, extracellular	45.63	52.64
TraesCS7A01G365700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	50.66	52.25
Os02t0214400-01	Rice	plasma membrane	50.66	52.02
HORVU7Hr1G085860.1	Barley	endoplasmic reticulum, extracellular, vacuole	49.78	51.35
HORVU6Hr1G038630.1	Barley	extracellular	45.2	51.11
TraesCS6D01G170500.1	Wheat	golgi	47.38	51.06
Bra033980.1-P	Field mustard	extracellular	45.2	50.99
Solyc03g058910.2.1	Tomato	extracellular, golgi	44.1	50.75
Bra001011.1-P	Field mustard	endoplasmic reticulum, extracellular	52.18	50.74
Bra004073.1-P	Field mustard	extracellular	44.98	50.61
TraesCS6B01G211900.1	Wheat	extracellular, golgi, vacuole	46.94	50.59
Bra004254.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	44.76	50.49
Os06t0144900-01	Rice	mitochondrion	51.97	50.32
Bra013833.1-P	Field mustard	endoplasmic reticulum, vacuole	44.54	50.25
Bra039081.1-P	Field mustard	extracellular, plastid	45.2	50.24
Zm00001d036158_P001	Maize	endoplasmic reticulum, extracellular, vacuole	49.56	50.11
PGSC0003DMT400014085	Potato	extracellular, golgi	43.45	50.0
Bra010482.1-P	Field mustard	endoplasmic reticulum, extracellular	44.1	49.75
EER87830	Sorghum	endoplasmic reticulum, extracellular, vacuole	50.44	49.68
Bra032696.1-P	Field mustard	endoplasmic reticulum, extracellular	44.76	49.64
Bra006279.1-P	Field mustard	endoplasmic reticulum, extracellular	51.31	49.47
Bra040809.1-P	Field mustard	endoplasmic reticulum, golgi, vacuole	45.63	49.41
Bra020672.1-P	Field mustard	extracellular	44.98	49.4
Bra035852.1-P	Field mustard	extracellular	44.1	49.27
Bra038614.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	44.32	49.15
Bra023504.1-P	Field mustard	extracellular	51.53	49.06
Bra008721.1-P	Field mustard	endoplasmic reticulum, extracellular	53.06	48.7
Bra019729.1-P	Field mustard	extracellular	39.3	48.65
Bra036155.1-P	Field mustard	extracellular	44.32	48.56
Bra029614.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	42.79	48.4
Zm00001d036945_P001	Maize	endoplasmic reticulum	44.32	48.33
Bra025274.1-P	Field mustard	extracellular	43.45	48.3
Bra032494.1-P	Field mustard	extracellular	45.41	48.26
Bra033008.1-P	Field mustard	extracellular	41.92	48.24
Bra030583.1-P	Field mustard	endoplasmic reticulum, extracellular, golgi	44.98	47.8
Bra015341.1-P	Field mustard	extracellular	44.98	47.8
Bra019730.1-P	Field mustard	extracellular	40.17	47.79
Bra035588.1-P	Field mustard	extracellular	40.39	47.68
Bra032730.1-P	Field mustard	endoplasmic reticulum, extracellular, vacuole	46.72	47.45
HORVU7Hr1G019500.1	Barley	mitochondrion	52.18	45.96
TraesCS6A01G184500.2	Wheat	extracellular, golgi, vacuole	46.29	45.79
Bra019209.1-P	Field mustard	endoplasmic reticulum, extracellular	41.48	45.67
Bra020859.1-P	Field mustard	extracellular	39.08	45.32
Bra013585.1-P	Field mustard	extracellular	38.65	45.04
Bra015000.1-P	Field mustard	golgi, plasma membrane	43.45	44.52
Bra006976.1-P	Field mustard	cytosol	43.45	43.54
Bra012756.1-P	Field mustard	extracellular	36.46	42.93
Bra015070.1-P	Field mustard	endoplasmic reticulum, extracellular	46.07	42.89
Bra007116.1-P	Field mustard	endoplasmic reticulum, extracellular	43.89	41.02
Bra028549.1-P	Field mustard	plasma membrane	43.89	41.02
Bra003200.1-P	Field mustard	endoplasmic reticulum, extracellular	43.89	40.94
Bra005799.1-P	Field mustard	extracellular, golgi	42.14	37.7
GSMUA_Achr7P08840_001	Banana	nucleus	54.59	37.31
Bra009469.1-P	Field mustard	extracellular, plastid, vacuole	41.92	36.64
Solyc02g067450.2.1	Tomato	extracellular	49.13	36.53

Protein Annotations

KEGG:00040+4.2.2.2	Gene3D:2.160.20.10	MapMan:21.3.5.2	InterPro:AmbAllergen	EnsemblPlantsGene:Bra026221	EnsemblPlants:Bra026221.1
EnsemblPlants:Bra026221.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016829	GO:GO:0030570	GO:GO:0045490
GO:GO:0046872	InterPro:IPR012334	UniProt:M4EBR2	PFAM:PF00544	PFAM:PF04431	PRINTS:PR00807
PANTHER:PTHR31683	PANTHER:PTHR31683:SF14	InterPro:Pec_lyase	InterPro:Pec_lyase_N	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00656	SUPFAM:SSF51126	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000253E750	:

Description

AT1G14420 (E=3e-235) AT59 | AT59; lyase/ pectate lyase

Coordinates

chrA06:-:5507583..5509296

Molecular Weight (calculated)

51480.7 Da

IEP (calculated)

9.778

GRAVY (calculated)

-0.379

Length

458 amino acids

Sequence
(BLAST)

001: MAAAFLNIGS YIFVFLLSSL ATLAPQVQAN IAVFDDYWTQ RQGDALKQTL ASFDPYPLNV TNHLNYHVAL ALDTTESTNS TRRELSQARR GRKMQNRGKC
101: VAHNPIDKCW RCDRDWEKNR KKLAVCALGF GRRTTGGKDG PIYVVTDASD DELISPRPGT LRHAVTRDGP LWIIFARSMV IKLQQELMMT SDKTIDGRGA
201: RVYIMGGSGL TLQFVNNVII HNIYIKQIVP ANGGLIRDSE QHIGLRTRSD GDGINLFGAT NVWIDHVSMT RCSDGMIDAI LGSTAVTVSN SHFTDHQEVM
301: LFGANDKHEI DKKMQITVAF NHFGKRLEQR MPRVRFGTIH VVNNDYTHWE MYAIGGNMNP TIISHGNRFI APPNEQAKQI TKREYTSYVD WKLWNWQSEG
401: DYFLNGAYFV QSGKPNAWSP KPKNPIPNKF AIRPKPGTMV RKLTMDAGVL GCKQGQAC

Best Arabidopsis Sequence Match ( AT1G14420.1 )
(BLAST)

001: MAAAFLNLGG YVFVFFSSFL AIVAPQVRGN VAVFDSYWTQ RQSDALKQTI GSYDPHPLNV TNHFNYHVNI AVDASESRND TRRELTQVRS GRKTHKSSGK
101: CLAYNPIDNC WRCDRNWANN RKKLADCVLG FGRRTTGGKD GPIYVVKDAS DNDLINPKPG TLRHAVTRDG PLWIIFARSM IIKLQQELMI TSDKTIDGRG
201: ARVYIMEGAG LTLQFVNNVI IHNIYVKHIV PGNGGLIRDS EAHIGLRTKS DGDGISLFGA TNIWIDHVSM TRCADGMIDA IDGSTAVTIS NSHFTDHQEV
301: MLFGARDEHV IDKKMQITVA FNHFGKRLEQ RMPRCRYGTI HVVNNDYTHW EMYAIGGNMN PTIISQGNRF IAPPNEEAKQ ITKREYTPYG EWKSWNWQSE
401: GDYFLNGAYF VQSGKANAWS SKPKTPLPNK FTIRPKPGTM VRKLTMDAGV LGCKLGEAC

Arabidopsis Description

AT59Probable pectate lyase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S2]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.