Factsheet for TraesCS7D01G356700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G365700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	98.65	98.65
TraesCS7B01G261700.1	Wheat	endoplasmic reticulum, extracellular, vacuole	97.75	97.75
HORVU7Hr1G085860.1	Barley	endoplasmic reticulum, extracellular, vacuole	92.79	92.79
Os06t0583900-01	Rice	plasma membrane	75.9	75.22
EER88571	Sorghum	endoplasmic reticulum, plasma membrane	72.07	70.48
Zm00001d046389_P007	Maize	endoplasmic reticulum, extracellular	68.69	70.44
Zm00001d036945_P001	Maize	endoplasmic reticulum	61.49	65.0
TraesCS6D01G170500.1	Wheat	golgi	60.14	62.82
GSMUA_Achr6P00830_001	Banana	endoplasmic reticulum, extracellular	59.01	59.95
VIT_14s0108g00030.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	59.01	59.68
VIT_17s0000g05740.t01	Wine grape	extracellular	57.43	59.44
KRH63402	Soybean	extracellular	58.11	59.31
GSMUA_Achr10P...	Banana	extracellular	51.58	58.72
VIT_01s0026g01670.t01	Wine grape	endoplasmic reticulum, extracellular, vacuole	58.33	58.47
GSMUA_Achr10P...	Banana	cytosol	45.05	57.8
GSMUA_Achr2P16830_001	Banana	endoplasmic reticulum, extracellular	56.98	57.76
PGSC0003DMT400083135	Potato	extracellular	56.53	57.7
Solyc03g113150.2.1	Tomato	endoplasmic reticulum, golgi, vacuole	56.53	57.7
KRH54508	Soybean	extracellular	43.24	57.66
KRH01130	Soybean	extracellular	56.98	57.5
PGSC0003DMT400046723	Potato	endoplasmic reticulum, golgi, vacuole	56.08	57.24
Solyc06g071020.2.1	Tomato	extracellular	56.08	57.24
Solyc01g010740.2.1	Tomato	endoplasmic reticulum, extracellular	55.86	56.49
PGSC0003DMT400002241	Potato	extracellular	55.86	56.49
VIT_01s0026g01680.t01	Wine grape	endoplasmic reticulum, extracellular	55.86	55.98
Solyc02g087670.2.1	Tomato	extracellular	56.08	55.83
PGSC0003DMT400003310	Potato	extracellular	55.86	55.61
KRH18498	Soybean	endoplasmic reticulum, extracellular, vacuole	55.41	55.53
KRG93502	Soybean	extracellular	55.41	55.53
KRH45851	Soybean	extracellular	54.5	53.66
PGSC0003DMT400017863	Potato	extracellular	53.38	53.62
PGSC0003DMT400014086	Potato	extracellular	53.6	53.24
KRH74782	Soybean	extracellular	53.6	53.12
PGSC0003DMT400017862	Potato	endoplasmic reticulum, extracellular	47.3	52.9
Solyc03g058890.2.1	Tomato	extracellular	53.38	52.78
Bra026832.1-P	Field mustard	extracellular	52.7	51.77
Bra016700.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	53.15	51.53
CDX96854	Canola	endoplasmic reticulum, extracellular, plasma membrane	53.15	51.53
AT1G14420.1	Thale cress	endoplasmic reticulum	52.93	51.2
CDY68729	Canola	endoplasmic reticulum, extracellular, plasma membrane	52.7	51.09
Bra026221.1-P	Field mustard	endoplasmic reticulum	52.7	51.09
KRH69345	Soybean	extracellular	51.35	51.01
CDY17432	Canola	extracellular	52.25	50.54
TraesCS6D01G129200.1	Wheat	endoplasmic reticulum, extracellular, vacuole	43.02	50.53
CDY39314	Canola	extracellular	52.03	50.33
Bra017412.1-P	Field mustard	extracellular	52.03	50.33
CDY04133	Canola	extracellular	52.03	50.33
Solyc05g007080.2.1	Tomato	extracellular	51.58	50.22
PGSC0003DMT400045436	Potato	extracellular	51.8	50.11
CDY28691	Canola	endoplasmic reticulum, extracellular, vacuole	52.93	50.11
CDX74293	Canola	endoplasmic reticulum, extracellular	53.15	50.11
CDX91953	Canola	endoplasmic reticulum, extracellular	53.15	50.11
Bra001011.1-P	Field mustard	endoplasmic reticulum, extracellular	52.7	49.68
Solyc03g058910.2.1	Tomato	extracellular, golgi	44.37	49.5
Bra026583.1-P	Field mustard	endoplasmic reticulum, plasma membrane	50.68	49.23
PGSC0003DMT400014085	Potato	extracellular, golgi	43.92	48.99
AT3G01270.1	Thale cress	endoplasmic reticulum, extracellular	52.03	48.63
AT2G02720.1	Thale cress	extracellular, vacuole	49.77	48.57
AT5G15110.1	Thale cress	endoplasmic reticulum, extracellular	51.35	48.31
CDX81636	Canola	endoplasmic reticulum	52.25	47.93
CDY03043	Canola	extracellular	49.55	47.93
CDX85564	Canola	extracellular	50.68	47.57
CDY45202	Canola	extracellular	48.87	47.28
Bra024811.1-P	Field mustard	extracellular	48.87	47.28
CDY63769	Canola	extracellular	50.9	47.18
CDY53552	Canola	extracellular	52.48	47.07
CDX78607	Canola	endoplasmic reticulum, extracellular	50.23	46.95
CDX70590	Canola	endoplasmic reticulum, extracellular	50.23	46.95
Bra006279.1-P	Field mustard	endoplasmic reticulum, extracellular	50.23	46.95
Bra023504.1-P	Field mustard	extracellular	50.68	46.78
CDY66593	Canola	endoplasmic reticulum, extracellular	52.03	46.29
CDX69550	Canola	endoplasmic reticulum, extracellular	51.8	46.09
Bra008721.1-P	Field mustard	endoplasmic reticulum, extracellular	51.8	46.09
TraesCS2D01G018000.1	Wheat	golgi	48.65	45.67
TraesCS1D01G142400.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	46.62	43.31
GSMUA_Achr7P08840_001	Banana	nucleus	58.56	38.81
Solyc02g067450.2.1	Tomato	extracellular	49.55	35.71
CDY04136	Canola	mitochondrion, nucleus	0.45	1.32

Protein Annotations

EnsemblPlants:TraesCS7D01G356700.1	EnsemblPlantsGene:TraesCS7D01G356700	Gene3D:2.160.20.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0030570
InterPro:AmbAllergen	InterPro:IPR012334	InterPro:Pec_lyase	InterPro:Pec_lyase_N	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
KEGG:00040+4.2.2.2	PANTHER:PTHR31683	PANTHER:PTHR31683:SF27	PFAM:PF00544	PFAM:PF04431	PRINTS:PR00807
SEG:seg	SignalP:SignalP-noTM	SMART:SM00656	SUPFAM:SSF51126	MapMan:21.3.5.2	:

Description

No Description!

Coordinates

chr7D:-:459872323..459873744

Molecular Weight (calculated)

49615.1 Da

IEP (calculated)

8.274

GRAVY (calculated)

-0.350

Length

444 amino acids

Sequence
(BLAST)

001: MEGFQWSRPV SLLLYAVFFL AAAAVSEANI GEFDEYWQRR QLEARARAEA AYHPNPIEVA NSLNRAVHRA VREESGSRRK LLGLHKKFAG PCQATNPIDR
101: CWRCRDDWAT DRMRLARCAQ GFGRHATGGL GGKIYIVTDG SDDDVLEPRP GTLRWAVIQN EPLWIIFARP MLIKLKEELL VGSNKTIDGR GGQLRIADGA
201: QVTVQYAHNV IIHNIHVNDL IVGKGGRIRD SPQHAGFRTQ SDGDGVSVFG STDVWLDHLS LATCQDGLID VIDQSTGVTI SNCHLTNHND VMLFGSSDSN
301: PKDEIMQITV AFNHFGRGLV QRMPRCRWGF FHVVNNDYTH WLMYAIGGSK NPTIISQGNR YIAPPNLAAK LITKRLYAEE AEWKNWVWHS EGDLMLNDAV
401: FADSGGPNQR KFEKDDLIPP KPGSYVTRLT RFAGCLPCKP GKPC

Best Arabidopsis Sequence Match ( AT1G14420.1 )
(BLAST)

001: MAAAFLNLGG YVFVFFSSFL AIVAPQVRGN VAVFDSYWTQ RQSDALKQTI GSYDPHPLNV TNHFNYHVNI AVDASESRND TRRELTQVRS GRKTHKSSGK
101: CLAYNPIDNC WRCDRNWANN RKKLADCVLG FGRRTTGGKD GPIYVVKDAS DNDLINPKPG TLRHAVTRDG PLWIIFARSM IIKLQQELMI TSDKTIDGRG
201: ARVYIMEGAG LTLQFVNNVI IHNIYVKHIV PGNGGLIRDS EAHIGLRTKS DGDGISLFGA TNIWIDHVSM TRCADGMIDA IDGSTAVTIS NSHFTDHQEV
301: MLFGARDEHV IDKKMQITVA FNHFGKRLEQ RMPRCRYGTI HVVNNDYTHW EMYAIGGNMN PTIISQGNRF IAPPNEEAKQ ITKREYTPYG EWKSWNWQSE
401: GDYFLNGAYF VQSGKANAWS SKPKTPLPNK FTIRPKPGTM VRKLTMDAGV LGCKLGEAC

Arabidopsis Description

AT59Probable pectate lyase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S2]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.