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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular, vacuole
Any Predictor:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G356700.1 Wheat extracellular 92.79 92.79
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 92.34 92.34
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 92.12 92.12
Os06t0583900-01 Rice plasma membrane 77.25 76.56
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 69.82 71.59
EER88571 Sorghum endoplasmic reticulum, plasma membrane 72.75 71.15
Zm00001d036945_P001 Maize endoplasmic reticulum 63.06 66.67
HORVU6Hr1G038630.1 Barley extracellular 59.68 65.43
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 59.01 59.68
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 57.66 58.58
VIT_17s0000g05740.t01 Wine grape extracellular 56.31 58.28
KRH63402 Soybean extracellular 56.98 58.16
KRH01130 Soybean extracellular 57.21 57.73
PGSC0003DMT400083135 Potato extracellular 56.08 57.24
GSMUA_Achr10P... Banana cytosol 44.59 57.23
GSMUA_Achr10P... Banana extracellular 50.0 56.92
KRH54508 Soybean extracellular 42.57 56.76
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 56.53 56.66
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 55.86 56.62
Solyc06g071020.2.1 Tomato extracellular 55.18 56.32
Solyc03g113150.2.1 Tomato endoplasmic reticulum, golgi, vacuole 54.95 56.09
PGSC0003DMT400046723 Potato endoplasmic reticulum, golgi, vacuole 54.5 55.63
Solyc02g087670.2.1 Tomato extracellular 55.86 55.61
HORVU2Hr1G002930.1 Barley cytosol 34.23 55.47
PGSC0003DMT400003310 Potato extracellular 55.63 55.38
Solyc01g010740.2.1 Tomato endoplasmic reticulum, extracellular 54.73 55.35
PGSC0003DMT400002241 Potato extracellular 54.73 55.35
KRG93502 Soybean extracellular 54.73 54.85
KRH18498 Soybean endoplasmic reticulum, extracellular, vacuole 54.5 54.63
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 54.5 54.63
PGSC0003DMT400017863 Potato extracellular 53.15 53.39
KRH45851 Soybean extracellular 53.6 52.77
KRH74782 Soybean extracellular 53.15 52.68
PGSC0003DMT400014086 Potato extracellular 52.7 52.35
Solyc03g058890.2.1 Tomato extracellular 52.48 51.89
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 45.5 50.88
KRH69345 Soybean extracellular 50.9 50.56
Bra016700.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 52.03 50.44
CDX96854 Canola endoplasmic reticulum, extracellular, plasma membrane 52.03 50.44
Bra026832.1-P Field mustard extracellular 51.13 50.22
CDY17432 Canola extracellular 51.8 50.11
CDY68729 Canola endoplasmic reticulum, extracellular, plasma membrane 51.58 50.0
CDX91953 Canola endoplasmic reticulum, extracellular 52.93 49.89
CDX74293 Canola endoplasmic reticulum, extracellular 52.93 49.89
CDY28691 Canola endoplasmic reticulum, extracellular, vacuole 52.7 49.89
Bra026221.1-P Field mustard endoplasmic reticulum 51.35 49.78
PGSC0003DMT400045436 Potato extracellular 51.35 49.67
AT1G14420.1 Thale cress endoplasmic reticulum 51.35 49.67
Bra001011.1-P Field mustard endoplasmic reticulum, extracellular 52.48 49.47
CDY04133 Canola extracellular 51.13 49.46
Bra017412.1-P Field mustard extracellular 51.13 49.46
Solyc05g007080.2.1 Tomato extracellular 50.68 49.34
CDY39314 Canola extracellular 50.68 49.02
AT3G01270.1 Thale cress endoplasmic reticulum, extracellular 52.25 48.84
Solyc03g058910.2.1 Tomato extracellular, golgi 43.69 48.74
HORVU6Hr1G027330.1 Barley extracellular 41.89 48.69
AT5G15110.1 Thale cress endoplasmic reticulum, extracellular 51.58 48.52
PGSC0003DMT400014085 Potato extracellular, golgi 43.47 48.49
Bra026583.1-P Field mustard endoplasmic reticulum, plasma membrane 49.55 48.14
AT2G02720.1 Thale cress extracellular, vacuole 48.87 47.69
CDX85564 Canola extracellular 50.45 47.36
HORVU5Hr1G005000.2 Barley cytosol 36.26 47.21
CDY63769 Canola extracellular 50.9 47.18
Bra006279.1-P Field mustard endoplasmic reticulum, extracellular 50.45 47.16
CDX70590 Canola endoplasmic reticulum, extracellular 50.45 47.16
CDX78607 Canola endoplasmic reticulum, extracellular 50.45 47.16
HORVU7Hr1G019500.1 Barley mitochondrion 55.18 47.12
CDY03043 Canola extracellular 48.42 46.84
Bra023504.1-P Field mustard extracellular 50.68 46.78
CDY45202 Canola extracellular 48.2 46.62
Bra024811.1-P Field mustard extracellular 48.2 46.62
CDY66593 Canola endoplasmic reticulum, extracellular 52.25 46.49
CDX69550 Canola endoplasmic reticulum, extracellular 52.25 46.49
Bra008721.1-P Field mustard endoplasmic reticulum, extracellular 52.25 46.49
CDX81636 Canola endoplasmic reticulum 50.68 46.49
CDY53552 Canola extracellular 50.9 45.66
HORVU2Hr1G002880.2 Barley mitochondrion 50.23 43.73
HORVU1Hr1G038220.7 Barley endoplasmic reticulum, extracellular 45.72 41.68
GSMUA_Achr7P08840_001 Banana nucleus 55.86 37.01
Solyc02g067450.2.1 Tomato extracellular 47.97 34.58
CDY04136 Canola mitochondrion, nucleus 0.45 1.32
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2EMBL:AK375770InterPro:AmbAllergenUniProt:F2EHZ3
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009987GO:GO:0016829GO:GO:0030570GO:GO:0045490GO:GO:0046872
EnsemblPlantsGene:HORVU7Hr1G085860EnsemblPlants:HORVU7Hr1G085860.1InterPro:IPR012334PFAM:PF00544PFAM:PF04431PRINTS:PR00807
PANTHER:PTHR31683PANTHER:PTHR31683:SF27InterPro:Pec_lyaseInterPro:Pec_lyase_NInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0002008B77SEG:seg:
Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:F2EHZ3]
Coordinates
chrchr7H:+:519550742..519552674
Molecular Weight (calculated)
49377.9 Da
IEP (calculated)
8.830
GRAVY (calculated)
-0.339
Length
444 amino acids
Sequence
(BLAST)
001: MEGFQWSRPV SLLLYAVLFL SAAAVSEANI GEFDEHWQRR KLEARARAEA TYHPNPIEVA NSLNRAVHRS LRDESGSRRK LLGLHKKFAG PCTATNPIDR
101: CWRCRKDWAT DRMRLARCAQ GFGRNATGGL GGKIYIVTDG TDDDVLEPRP GTLRWGVIQN EPLWIIFARP MLIKLKEELL VGSDKTIDGR GAQVRIADGA
201: QVTVQYSHNV IIHNIHVNDL IVGKGGRIRD SPQHAGFRTQ SDGDGVSVFG STNVWLDHLS LATCQDGLID VIAEATGVTI SNCHLTNHND VMLFGSSDSN
301: PKDQIMQVTV AFNHFGRGLV QRMPRCRWGF FHVVNNDYTH WLMYAIGGSK NPTIISQGNR YIAPPNLAAK LITKRLGASE AEWKNWVWHS QDDLLLNDAV
401: FADSGGANER KFDKDDLITP KPGSYVTRLT RFAGCLPCKP GKPC
Best Arabidopsis Sequence Match ( AT3G01270.1 )
(BLAST)
001: METARLFKLV CVICIASLIP TIRANVADET DEYWVNKANE ARKHTLMAYH PDPYEIVDHF HERHYDNSTD VEGTEEEKAV ASEEEDVIEM ISSPTNSTRR
101: SLTGRGKGKG KGKWSKLTGP CTASNPIDKC WRCQPDWARR RKKLVHCVRG FGYRTTGGKR GRIYVVTSPR DDDMVNPRPG TLRHAVIQKE PLWIVFKHDM
201: SIRLSQELMI TSDKTIDARG ANVHIAYGAG ITMQYVHNII IHGLHVHHIV KSSGGLIRDS INHFGHRGEA DGDGISIFGA TNIWLDHISM SKCQDGLIDA
301: IMGSTAITIS NSHFTHHNDV MLLGAQNNNM DDKKMQVTVA YNHFGKGLVQ RMPRVRWGFV HVVNNDYTHW ELYAIGGSQG PTILSHGNRF IAPPHKQHYR
401: EVTKRDYASE SEWKNWNWRS EKDVFMNNAY FRQSGNPHFK CSHSRQQMIK PKNGMAVSKL TKYAGALDCR VGKAC
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q08A70]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.