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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:
  • nucleus 2
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, extracellular
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
EpiLoc:nucleus
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:extracellular, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX74293 Canola endoplasmic reticulum, extracellular 98.94 98.94
CDX91953 Canola endoplasmic reticulum, extracellular 98.73 98.73
AT3G01270.1 Thale cress endoplasmic reticulum, extracellular 89.17 88.42
Bra023504.1-P Field mustard extracellular 78.13 76.51
Bra006279.1-P Field mustard endoplasmic reticulum, extracellular 76.43 75.79
Bra008721.1-P Field mustard endoplasmic reticulum, extracellular 76.65 72.34
GSMUA_Achr10P... Banana cytosol 43.1 58.67
VIT_14s0108g00030.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 54.56 58.54
VIT_01s0026g01670.t01 Wine grape endoplasmic reticulum, extracellular, vacuole 54.99 58.47
TraesCS4A01G385700.1 Wheat cytosol 26.96 57.99
GSMUA_Achr6P00830_001 Banana endoplasmic reticulum, extracellular 52.02 56.06
KRH18498 Soybean endoplasmic reticulum, extracellular, vacuole 52.65 55.98
GSMUA_Achr10P... Banana extracellular 46.07 55.64
VIT_01s0026g01680.t01 Wine grape endoplasmic reticulum, extracellular 51.8 55.08
GSMUA_Achr2P16830_001 Banana endoplasmic reticulum, extracellular 51.17 55.02
Solyc02g087670.2.1 Tomato extracellular 52.02 54.93
KRG93502 Soybean extracellular 51.59 54.85
PGSC0003DMT400003310 Potato extracellular 51.59 54.48
Bra013833.1-P Field mustard endoplasmic reticulum, vacuole 46.92 54.43
Solyc03g058890.2.1 Tomato extracellular 51.59 54.12
PGSC0003DMT400017863 Potato extracellular 50.74 54.07
Os02t0214400-01 Rice plasma membrane 51.17 54.04
Bra026832.1-P Field mustard extracellular 51.8 53.98
EES06507 Sorghum golgi, vacuole 50.96 53.93
PGSC0003DMT400014086 Potato extracellular 51.17 53.91
PGSC0003DMT400017862 Potato endoplasmic reticulum, extracellular 45.44 53.9
KRH01130 Soybean extracellular 50.32 53.86
HORVU6Hr1G038630.1 Barley extracellular 46.28 53.83
Os06t0583900-01 Rice plasma membrane 50.96 53.57
Bra016700.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 52.02 53.49
Bra032696.1-P Field mustard endoplasmic reticulum, extracellular 46.71 53.27
Bra010482.1-P Field mustard endoplasmic reticulum, extracellular 45.86 53.2
Bra020672.1-P Field mustard extracellular 46.92 53.0
TraesCS6D01G170500.1 Wheat golgi 47.77 52.94
TraesCS7A01G365700.1 Wheat endoplasmic reticulum, extracellular, vacuole 49.89 52.93
Bra036155.1-P Field mustard extracellular 46.92 52.87
Bra038614.1-P Field mustard endoplasmic reticulum, extracellular, plasma membrane 46.28 52.78
Bra026583.1-P Field mustard endoplasmic reticulum, plasma membrane 51.17 52.74
Bra017412.1-P Field mustard extracellular 51.38 52.72
TraesCS7D01G356700.1 Wheat extracellular 49.68 52.7
Bra025274.1-P Field mustard extracellular 46.07 52.67
Bra004073.1-P Field mustard extracellular 45.44 52.58
HORVU7Hr1G085860.1 Barley endoplasmic reticulum, extracellular, vacuole 49.47 52.48
TraesCS7B01G261700.1 Wheat endoplasmic reticulum, extracellular, vacuole 49.47 52.48
TraesCS6B01G211900.1 Wheat extracellular, golgi, vacuole 47.35 52.47
EER88571 Sorghum endoplasmic reticulum, plasma membrane 50.53 52.42
Bra040809.1-P Field mustard endoplasmic reticulum, golgi, vacuole 46.92 52.25
Bra039081.1-P Field mustard extracellular, plastid 45.65 52.18
Bra026221.1-P Field mustard endoplasmic reticulum 50.74 52.18
TraesCS7A01G086600.1 Wheat endoplasmic reticulum, extracellular 49.47 52.01
Bra004254.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 44.8 51.97
Bra035852.1-P Field mustard extracellular 45.22 51.95
Zm00001d000216_P001 Maize golgi, vacuole 48.2 51.83
OQU75805 Sorghum mitochondrion 48.62 51.81
Os06t0144200-01 Rice extracellular, plasma membrane 49.47 51.78
Bra033980.1-P Field mustard extracellular 44.59 51.72
Bra024811.1-P Field mustard extracellular 50.32 51.63
Bra029614.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 44.37 51.6
Zm00001d046389_P007 Maize endoplasmic reticulum, extracellular 47.13 51.27
Bra033008.1-P Field mustard extracellular 42.89 50.75
Zm00001d036158_P001 Maize endoplasmic reticulum, extracellular, vacuole 48.41 50.33
Bra019209.1-P Field mustard endoplasmic reticulum, extracellular 44.37 50.24
EER87830 Sorghum endoplasmic reticulum, extracellular, vacuole 49.47 50.11
PGSC0003DMT400014085 Potato extracellular, golgi 42.25 50.0
Solyc03g058910.2.1 Tomato extracellular, golgi 42.04 49.75
Bra015341.1-P Field mustard extracellular 45.44 49.65
Bra032494.1-P Field mustard extracellular 45.44 49.65
Bra030583.1-P Field mustard endoplasmic reticulum, extracellular, golgi 45.22 49.42
TraesCS6A01G184500.2 Wheat extracellular, golgi, vacuole 48.2 49.03
Zm00001d036945_P001 Maize endoplasmic reticulum 43.52 48.81
Os06t0144900-01 Rice mitochondrion 48.62 48.41
Bra032730.1-P Field mustard endoplasmic reticulum, extracellular, vacuole 46.07 48.12
Bra019729.1-P Field mustard extracellular 37.58 47.84
Bra013585.1-P Field mustard extracellular 39.49 47.33
Bra019730.1-P Field mustard extracellular 38.64 47.27
Bra015000.1-P Field mustard golgi, plasma membrane 43.95 46.31
Bra020859.1-P Field mustard extracellular 38.0 45.32
HORVU7Hr1G019500.1 Barley mitochondrion 49.89 45.19
Bra035588.1-P Field mustard extracellular 36.52 44.33
Bra015070.1-P Field mustard endoplasmic reticulum, extracellular 45.65 43.7
Bra006976.1-P Field mustard cytosol 42.04 43.33
Bra012756.1-P Field mustard extracellular 34.18 41.39
Bra028549.1-P Field mustard plasma membrane 42.89 41.22
Bra007116.1-P Field mustard endoplasmic reticulum, extracellular 41.83 40.2
Bra003200.1-P Field mustard endoplasmic reticulum, extracellular 41.4 39.71
GSMUA_Achr7P08840_001 Banana nucleus 53.08 37.31
Bra005799.1-P Field mustard extracellular, golgi 40.13 36.91
Solyc02g067450.2.1 Tomato extracellular 47.98 36.69
Bra009469.1-P Field mustard extracellular, plastid, vacuole 40.34 36.26
Protein Annotations
KEGG:00040+4.2.2.2Gene3D:2.160.20.10MapMan:21.3.5.2InterPro:AmbAllergenEnsemblPlantsGene:Bra001011EnsemblPlants:Bra001011.1
EnsemblPlants:Bra001011.1-PGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016829GO:GO:0030570GO:GO:0045490
GO:GO:0046872InterPro:IPR012334UniProt:M4C9Y2PFAM:PF00544PFAM:PF04431PRINTS:PR00807
PANTHER:PTHR31683PANTHER:PTHR31683:SF7InterPro:Pec_lyaseInterPro:Pec_lyase_NInterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00656SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI00025407F1SEG:seg:
Description
AT3G01270 (E=1e-220) | pectate lyase family protein
Coordinates
chrA03:+:14384192..14386158
Molecular Weight (calculated)
53630.9 Da
IEP (calculated)
9.672
GRAVY (calculated)
-0.604
Length
471 amino acids
Sequence
(BLAST)
001: METARLFKLV CVICIASLIP TLRANVAETD DYWVKMANEA RKRTLMAYHP DPYQIVDHFH ERHYDNSTDV EETEEHASEE EDDIEMSSSL TNSTRRSLRG
101: RGKGKGRGKW SKLKGPCTAS NPIDKCWRCQ PDWARRRKKL VKCVRGFGYR TTGGKRGRIY VVTSNRDDDT VNPRPGTLRH AVIQNEPLWI IFKHDMSIRL
201: SQELMINSHK TIDARGTNVH IAYGAGITMQ YVRNIIIHGL HVHHIVPGSG GMIRNSNDHF GFRGQADGDG ISLFGATNIW LDHISMSKCQ DGLIDAIMGS
301: PGITLSNSHF THHNDVMLLG AQNDNHADKK MQVTVAFNHF GKGLVQRMPR IRWGFVHVVN NDYTHWELYA IGGSQSPTIL SHGNRFIAPP HLQHYREVTK
401: RDYAPESEWK NWNWRSDKDI FMNNAYFRQS GNPKFMCSHS RQQMIKPKHG SAVSTLTKYA GALDCRVGKP C
Best Arabidopsis Sequence Match ( AT3G01270.1 )
(BLAST)
001: METARLFKLV CVICIASLIP TIRANVADET DEYWVNKANE ARKHTLMAYH PDPYEIVDHF HERHYDNSTD VEGTEEEKAV ASEEEDVIEM ISSPTNSTRR
101: SLTGRGKGKG KGKWSKLTGP CTASNPIDKC WRCQPDWARR RKKLVHCVRG FGYRTTGGKR GRIYVVTSPR DDDMVNPRPG TLRHAVIQKE PLWIVFKHDM
201: SIRLSQELMI TSDKTIDARG ANVHIAYGAG ITMQYVHNII IHGLHVHHIV KSSGGLIRDS INHFGHRGEA DGDGISIFGA TNIWLDHISM SKCQDGLIDA
301: IMGSTAITIS NSHFTHHNDV MLLGAQNNNM DDKKMQVTVA YNHFGKGLVQ RMPRVRWGFV HVVNNDYTHW ELYAIGGSQG PTILSHGNRF IAPPHKQHYR
401: EVTKRDYASE SEWKNWNWRS EKDVFMNNAY FRQSGNPHFK CSHSRQQMIK PKNGMAVSKL TKYAGALDCR VGKAC
Arabidopsis Description
Pectate lyase [Source:UniProtKB/TrEMBL;Acc:Q08A70]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.